Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc03263 and SMc03264 are separated by 81 nucleotides
SMc03263: SMc03263 - hypothetical protein, at 3,378,930 to 3,379,202
SMc03263
SMc03264: SMc03264 - dipeptidase, at 3,379,284 to 3,380,294
SMc03264
Position (kb)
3378
3379
3380 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3377.955 kb on - strand at 3378.035 kb on + strand at 3378.036 kb on - strand at 3378.038 kb on - strand at 3378.095 kb on + strand at 3378.158 kb on + strand at 3378.158 kb on + strand at 3378.158 kb on + strand at 3378.158 kb on + strand at 3378.158 kb on + strand at 3378.158 kb on + strand at 3378.159 kb on - strand at 3378.159 kb on - strand at 3378.159 kb on - strand at 3378.168 kb on + strand at 3378.213 kb on - strand at 3378.299 kb on + strand at 3378.299 kb on + strand at 3378.300 kb on - strand at 3378.320 kb on + strand at 3378.320 kb on + strand at 3378.320 kb on + strand at 3378.321 kb on - strand at 3378.321 kb on - strand at 3378.321 kb on - strand at 3378.321 kb on - strand at 3378.332 kb on - strand at 3378.332 kb on - strand at 3378.332 kb on - strand at 3378.580 kb on - strand at 3378.596 kb on - strand at 3378.596 kb on - strand at 3378.667 kb on - strand at 3378.675 kb on + strand at 3378.676 kb on - strand at 3378.676 kb on - strand at 3378.682 kb on - strand at 3378.705 kb on + strand at 3378.705 kb on + strand at 3378.705 kb on + strand at 3378.705 kb on + strand at 3378.706 kb on - strand at 3378.706 kb on - strand at 3378.872 kb on - strand at 3379.190 kb on - strand at 3379.243 kb on + strand at 3379.277 kb on + strand at 3379.426 kb on + strand, within SMc03264 at 3379.426 kb on + strand, within SMc03264 at 3379.426 kb on + strand, within SMc03264 at 3379.426 kb on + strand, within SMc03264 at 3379.426 kb on + strand, within SMc03264 at 3379.426 kb on + strand, within SMc03264 at 3379.538 kb on - strand, within SMc03264 at 3379.593 kb on - strand, within SMc03264 at 3379.721 kb on + strand, within SMc03264 at 3379.791 kb on + strand, within SMc03264 at 3379.791 kb on + strand, within SMc03264 at 3379.811 kb on + strand, within SMc03264 at 3379.812 kb on - strand, within SMc03264 at 3379.814 kb on - strand, within SMc03264 at 3379.814 kb on - strand, within SMc03264 at 3379.821 kb on - strand, within SMc03264 at 3379.887 kb on - strand, within SMc03264 at 3379.887 kb on - strand, within SMc03264 at 3379.942 kb on + strand, within SMc03264 at 3379.943 kb on - strand, within SMc03264 at 3379.943 kb on - strand, within SMc03264 at 3379.979 kb on - strand, within SMc03264 at 3380.018 kb on + strand, within SMc03264 at 3380.019 kb on - strand, within SMc03264 at 3380.070 kb on + strand, within SMc03264 at 3380.070 kb on + strand, within SMc03264 at 3380.072 kb on + strand at 3380.073 kb on - strand, within SMc03264 at 3380.073 kb on - strand, within SMc03264
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 3,377,955 - -0.1 3,378,035 + -0.6 3,378,036 - -0.1 3,378,038 - -3.6 3,378,095 + +0.7 3,378,158 + +0.6 3,378,158 + -0.6 3,378,158 + -1.1 3,378,158 + -0.8 3,378,158 + +1.2 3,378,158 + +2.8 3,378,159 - +1.5 3,378,159 - +1.9 3,378,159 - -1.7 3,378,168 + -1.3 3,378,213 - +0.0 3,378,299 + +0.3 3,378,299 + -0.0 3,378,300 - +0.7 3,378,320 + -3.1 3,378,320 + -0.2 3,378,320 + +0.1 3,378,321 - -0.1 3,378,321 - -1.1 3,378,321 - +3.1 3,378,321 - +2.1 3,378,332 - -2.0 3,378,332 - +1.7 3,378,332 - -2.0 3,378,580 - +1.4 3,378,596 - +1.2 3,378,596 - -1.5 3,378,667 - +1.3 3,378,675 + -0.2 3,378,676 - +1.3 3,378,676 - +0.2 3,378,682 - +0.3 3,378,705 + +0.8 3,378,705 + -0.4 3,378,705 + -1.8 3,378,705 + +0.5 3,378,706 - -2.9 3,378,706 - -0.9 3,378,872 - -0.8 3,379,190 - -0.9 3,379,243 + -0.0 3,379,277 + -0.4 3,379,426 + SMc03264 0.14 +1.4 3,379,426 + SMc03264 0.14 +0.3 3,379,426 + SMc03264 0.14 -3.1 3,379,426 + SMc03264 0.14 -0.5 3,379,426 + SMc03264 0.14 -1.8 3,379,426 + SMc03264 0.14 -1.3 3,379,538 - SMc03264 0.25 -1.8 3,379,593 - SMc03264 0.31 +1.0 3,379,721 + SMc03264 0.43 +1.1 3,379,791 + SMc03264 0.50 -1.7 3,379,791 + SMc03264 0.50 -1.8 3,379,811 + SMc03264 0.52 +0.8 3,379,812 - SMc03264 0.52 -0.1 3,379,814 - SMc03264 0.52 +0.6 3,379,814 - SMc03264 0.52 -0.1 3,379,821 - SMc03264 0.53 -2.5 3,379,887 - SMc03264 0.60 +0.9 3,379,887 - SMc03264 0.60 -1.2 3,379,942 + SMc03264 0.65 +1.8 3,379,943 - SMc03264 0.65 +0.1 3,379,943 - SMc03264 0.65 -1.3 3,379,979 - SMc03264 0.69 +1.3 3,380,018 + SMc03264 0.73 +2.9 3,380,019 - SMc03264 0.73 +0.3 3,380,070 + SMc03264 0.78 -0.0 3,380,070 + SMc03264 0.78 -0.4 3,380,072 + +2.1 3,380,073 - SMc03264 0.78 -0.2 3,380,073 - SMc03264 0.78 -1.0
Or see this region's nucleotide sequence