Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc02272 and SMc02273 overlap by 4 nucleotides SMc02273 and SMc02274 are separated by 367 nucleotides
SMc02272: SMc02272 - acyl-transferase transferase, at 639,160 to 640,575
SMc02272
SMc02273: SMc02273 - fatty acid synthase transmembrane protein, at 640,572 to 648,086
SMc02273
SMc02274: SMc02274 - capsule polysaccharide exporter protein, at 648,454 to 649,677
SMc02274
Position (kb) 640
641
642
643
644
645
646
647
648
649 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 639.596 kb on + strand, within SMc02272 at 639.597 kb on - strand, within SMc02272 at 639.652 kb on + strand, within SMc02272 at 639.652 kb on + strand, within SMc02272 at 639.652 kb on + strand, within SMc02272 at 639.653 kb on - strand, within SMc02272 at 639.656 kb on + strand, within SMc02272 at 639.657 kb on - strand, within SMc02272 at 639.863 kb on + strand, within SMc02272 at 639.896 kb on + strand, within SMc02272 at 640.076 kb on + strand, within SMc02272 at 640.113 kb on - strand, within SMc02272 at 640.257 kb on - strand, within SMc02272 at 640.257 kb on - strand, within SMc02272 at 640.262 kb on + strand, within SMc02272 at 640.392 kb on + strand, within SMc02272 at 640.392 kb on + strand, within SMc02272 at 640.393 kb on - strand, within SMc02272 at 640.393 kb on - strand, within SMc02272 at 640.393 kb on - strand, within SMc02272 at 640.686 kb on + strand at 640.687 kb on - strand at 640.727 kb on + strand at 640.728 kb on - strand at 640.830 kb on + strand at 640.831 kb on - strand at 640.851 kb on - strand at 641.297 kb on - strand at 641.314 kb on + strand at 641.315 kb on - strand at 641.315 kb on - strand at 641.675 kb on + strand, within SMc02273 at 641.675 kb on + strand, within SMc02273 at 641.843 kb on + strand, within SMc02273 at 641.844 kb on - strand, within SMc02273 at 641.844 kb on - strand, within SMc02273 at 641.891 kb on - strand, within SMc02273 at 642.017 kb on - strand, within SMc02273 at 642.064 kb on + strand, within SMc02273 at 642.065 kb on - strand, within SMc02273 at 642.068 kb on - strand, within SMc02273 at 642.406 kb on + strand, within SMc02273 at 642.406 kb on + strand, within SMc02273 at 642.406 kb on + strand, within SMc02273 at 642.407 kb on - strand, within SMc02273 at 642.407 kb on - strand, within SMc02273 at 642.409 kb on + strand, within SMc02273 at 642.409 kb on + strand, within SMc02273 at 642.410 kb on - strand, within SMc02273 at 642.410 kb on - strand, within SMc02273 at 642.410 kb on - strand, within SMc02273 at 642.417 kb on - strand, within SMc02273 at 642.944 kb on + strand, within SMc02273 at 642.944 kb on + strand, within SMc02273 at 642.944 kb on + strand, within SMc02273 at 642.944 kb on + strand, within SMc02273 at 642.945 kb on - strand, within SMc02273 at 642.945 kb on - strand, within SMc02273 at 642.999 kb on - strand, within SMc02273 at 643.006 kb on + strand, within SMc02273 at 643.006 kb on + strand, within SMc02273 at 643.006 kb on + strand, within SMc02273 at 643.074 kb on + strand, within SMc02273 at 643.185 kb on + strand, within SMc02273 at 643.186 kb on - strand, within SMc02273 at 643.186 kb on - strand, within SMc02273 at 643.186 kb on - strand, within SMc02273 at 643.396 kb on + strand, within SMc02273 at 643.396 kb on + strand, within SMc02273 at 643.396 kb on + strand, within SMc02273 at 643.397 kb on - strand, within SMc02273 at 643.397 kb on - strand, within SMc02273 at 643.397 kb on - strand, within SMc02273 at 643.397 kb on - strand, within SMc02273 at 643.549 kb on - strand, within SMc02273 at 643.729 kb on + strand, within SMc02273 at 643.730 kb on - strand, within SMc02273 at 643.998 kb on - strand, within SMc02273 at 643.998 kb on - strand, within SMc02273 at 643.998 kb on - strand, within SMc02273 at 644.206 kb on + strand, within SMc02273 at 644.206 kb on + strand, within SMc02273 at 644.207 kb on - strand, within SMc02273 at 644.207 kb on - strand, within SMc02273 at 644.548 kb on + strand, within SMc02273 at 644.549 kb on - strand, within SMc02273 at 644.590 kb on + strand, within SMc02273 at 644.590 kb on + strand, within SMc02273 at 644.591 kb on - strand, within SMc02273 at 644.591 kb on - strand, within SMc02273 at 644.591 kb on - strand, within SMc02273 at 644.591 kb on - strand, within SMc02273 at 644.594 kb on + strand, within SMc02273 at 644.594 kb on + strand, within SMc02273 at 644.595 kb on - strand, within SMc02273 at 644.595 kb on - strand, within SMc02273 at 644.762 kb on + strand, within SMc02273 at 644.763 kb on - strand, within SMc02273 at 644.763 kb on - strand, within SMc02273 at 644.763 kb on - strand, within SMc02273 at 644.763 kb on - strand, within SMc02273 at 644.764 kb on + strand, within SMc02273 at 644.764 kb on + strand, within SMc02273 at 644.764 kb on + strand, within SMc02273 at 644.765 kb on - strand, within SMc02273 at 644.765 kb on - strand, within SMc02273 at 644.765 kb on - strand, within SMc02273 at 644.854 kb on + strand, within SMc02273 at 644.854 kb on + strand, within SMc02273 at 644.959 kb on + strand, within SMc02273 at 644.959 kb on + strand, within SMc02273 at 644.989 kb on + strand, within SMc02273 at 644.990 kb on - strand, within SMc02273 at 645.253 kb on + strand, within SMc02273 at 645.253 kb on + strand, within SMc02273 at 645.253 kb on + strand, within SMc02273 at 645.253 kb on + strand, within SMc02273 at 645.254 kb on - strand, within SMc02273 at 645.254 kb on - strand, within SMc02273 at 645.676 kb on + strand, within SMc02273 at 645.676 kb on + strand, within SMc02273 at 645.790 kb on + strand, within SMc02273 at 645.791 kb on - strand, within SMc02273 at 645.844 kb on + strand, within SMc02273 at 646.112 kb on + strand, within SMc02273 at 646.214 kb on - strand, within SMc02273 at 646.335 kb on - strand, within SMc02273 at 646.335 kb on - strand, within SMc02273 at 646.641 kb on - strand, within SMc02273 at 646.641 kb on - strand, within SMc02273 at 646.716 kb on - strand, within SMc02273 at 646.716 kb on - strand, within SMc02273 at 646.717 kb on + strand, within SMc02273 at 646.717 kb on + strand, within SMc02273 at 646.717 kb on + strand, within SMc02273 at 646.718 kb on - strand, within SMc02273 at 646.718 kb on - strand, within SMc02273 at 646.718 kb on - strand, within SMc02273 at 646.718 kb on - strand, within SMc02273 at 646.718 kb on - strand, within SMc02273 at 646.718 kb on - strand, within SMc02273 at 646.718 kb on - strand, within SMc02273 at 646.994 kb on - strand, within SMc02273 at 647.124 kb on + strand, within SMc02273 at 647.133 kb on + strand, within SMc02273 at 647.133 kb on + strand, within SMc02273 at 647.133 kb on + strand, within SMc02273 at 647.133 kb on + strand, within SMc02273 at 647.133 kb on + strand, within SMc02273 at 647.134 kb on - strand, within SMc02273 at 647.134 kb on - strand, within SMc02273 at 647.134 kb on - strand, within SMc02273 at 647.134 kb on - strand, within SMc02273 at 647.165 kb on + strand, within SMc02273 at 647.165 kb on + strand, within SMc02273 at 647.178 kb on + strand, within SMc02273 at 647.179 kb on - strand, within SMc02273 at 647.179 kb on - strand, within SMc02273 at 647.219 kb on - strand, within SMc02273 at 647.219 kb on - strand, within SMc02273 at 647.219 kb on - strand, within SMc02273 at 647.219 kb on - strand, within SMc02273 at 647.318 kb on - strand, within SMc02273 at 647.392 kb on + strand at 647.393 kb on - strand at 647.413 kb on + strand at 647.490 kb on - strand at 647.628 kb on - strand at 647.668 kb on + strand at 647.668 kb on + strand at 647.669 kb on - strand at 647.734 kb on + strand at 647.735 kb on - strand at 647.735 kb on - strand at 647.834 kb on + strand at 647.835 kb on - strand at 647.835 kb on - strand at 647.836 kb on + strand at 647.836 kb on + strand at 647.836 kb on + strand at 647.836 kb on + strand at 647.836 kb on + strand at 647.836 kb on + strand at 647.836 kb on + strand at 647.836 kb on + strand at 647.836 kb on + strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.837 kb on - strand at 647.884 kb on + strand at 647.884 kb on + strand at 647.884 kb on + strand at 647.884 kb on + strand at 647.889 kb on - strand at 647.889 kb on - strand at 647.917 kb on + strand at 647.918 kb on - strand at 648.069 kb on + strand at 648.088 kb on + strand at 648.088 kb on + strand at 648.088 kb on + strand at 648.088 kb on + strand at 648.088 kb on + strand at 648.088 kb on + strand at 648.089 kb on - strand at 648.194 kb on - strand at 648.208 kb on - strand at 648.210 kb on + strand at 648.210 kb on + strand at 648.222 kb on - strand at 648.222 kb on - strand at 648.228 kb on + strand at 648.228 kb on + strand at 648.229 kb on - strand at 648.256 kb on + strand at 648.260 kb on + strand at 648.260 kb on + strand at 648.262 kb on + strand at 648.262 kb on + strand at 648.262 kb on + strand at 648.263 kb on - strand at 648.263 kb on - strand at 648.263 kb on - strand at 648.285 kb on + strand at 648.285 kb on + strand at 648.285 kb on + strand at 648.286 kb on - strand at 648.286 kb on - strand at 648.306 kb on + strand at 648.313 kb on + strand at 648.350 kb on + strand at 648.447 kb on + strand at 648.453 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 639,596 + SMc02272 0.31 +2.5 639,597 - SMc02272 0.31 +2.2 639,652 + SMc02272 0.35 +2.5 639,652 + SMc02272 0.35 +1.7 639,652 + SMc02272 0.35 +1.1 639,653 - SMc02272 0.35 +1.1 639,656 + SMc02272 0.35 +0.7 639,657 - SMc02272 0.35 +0.6 639,863 + SMc02272 0.50 +2.2 639,896 + SMc02272 0.52 -0.4 640,076 + SMc02272 0.65 +1.0 640,113 - SMc02272 0.67 +2.9 640,257 - SMc02272 0.77 +2.4 640,257 - SMc02272 0.77 +2.0 640,262 + SMc02272 0.78 +2.1 640,392 + SMc02272 0.87 +0.8 640,392 + SMc02272 0.87 +3.7 640,393 - SMc02272 0.87 -2.4 640,393 - SMc02272 0.87 +1.1 640,393 - SMc02272 0.87 +2.3 640,686 + +1.6 640,687 - +0.9 640,727 + +0.5 640,728 - +0.6 640,830 + +1.2 640,831 - +1.6 640,851 - +4.7 641,297 - +2.5 641,314 + +1.5 641,315 - +0.7 641,315 - +2.0 641,675 + SMc02273 0.15 +2.2 641,675 + SMc02273 0.15 -0.4 641,843 + SMc02273 0.17 +1.0 641,844 - SMc02273 0.17 +0.1 641,844 - SMc02273 0.17 +1.5 641,891 - SMc02273 0.18 +1.0 642,017 - SMc02273 0.19 +1.5 642,064 + SMc02273 0.20 +0.4 642,065 - SMc02273 0.20 +1.5 642,068 - SMc02273 0.20 +1.6 642,406 + SMc02273 0.24 +0.7 642,406 + SMc02273 0.24 +1.9 642,406 + SMc02273 0.24 +3.5 642,407 - SMc02273 0.24 +0.8 642,407 - SMc02273 0.24 +0.2 642,409 + SMc02273 0.24 +1.2 642,409 + SMc02273 0.24 +1.2 642,410 - SMc02273 0.24 +1.8 642,410 - SMc02273 0.24 +2.0 642,410 - SMc02273 0.24 +1.5 642,417 - SMc02273 0.25 +0.9 642,944 + SMc02273 0.32 +0.8 642,944 + SMc02273 0.32 +2.6 642,944 + SMc02273 0.32 +2.1 642,944 + SMc02273 0.32 +2.6 642,945 - SMc02273 0.32 +2.3 642,945 - SMc02273 0.32 +1.4 642,999 - SMc02273 0.32 +0.7 643,006 + SMc02273 0.32 +2.0 643,006 + SMc02273 0.32 +2.0 643,006 + SMc02273 0.32 +0.9 643,074 + SMc02273 0.33 +2.1 643,185 + SMc02273 0.35 +3.9 643,186 - SMc02273 0.35 +1.5 643,186 - SMc02273 0.35 +1.4 643,186 - SMc02273 0.35 +1.4 643,396 + SMc02273 0.38 +2.2 643,396 + SMc02273 0.38 +0.9 643,396 + SMc02273 0.38 +2.5 643,397 - SMc02273 0.38 +1.8 643,397 - SMc02273 0.38 +1.4 643,397 - SMc02273 0.38 +0.9 643,397 - SMc02273 0.38 +2.7 643,549 - SMc02273 0.40 +1.3 643,729 + SMc02273 0.42 +1.1 643,730 - SMc02273 0.42 -0.3 643,998 - SMc02273 0.46 +1.4 643,998 - SMc02273 0.46 +2.6 643,998 - SMc02273 0.46 +2.2 644,206 + SMc02273 0.48 +1.5 644,206 + SMc02273 0.48 -0.0 644,207 - SMc02273 0.48 +0.3 644,207 - SMc02273 0.48 +4.7 644,548 + SMc02273 0.53 +1.8 644,549 - SMc02273 0.53 +2.3 644,590 + SMc02273 0.53 +0.7 644,590 + SMc02273 0.53 +2.1 644,591 - SMc02273 0.53 +1.9 644,591 - SMc02273 0.53 +2.2 644,591 - SMc02273 0.53 -0.6 644,591 - SMc02273 0.53 -1.4 644,594 + SMc02273 0.54 +1.0 644,594 + SMc02273 0.54 +1.6 644,595 - SMc02273 0.54 +1.5 644,595 - SMc02273 0.54 +0.7 644,762 + SMc02273 0.56 +1.6 644,763 - SMc02273 0.56 +0.5 644,763 - SMc02273 0.56 +1.3 644,763 - SMc02273 0.56 -1.6 644,763 - SMc02273 0.56 +2.6 644,764 + SMc02273 0.56 +1.3 644,764 + SMc02273 0.56 +0.8 644,764 + SMc02273 0.56 +1.5 644,765 - SMc02273 0.56 +1.4 644,765 - SMc02273 0.56 +2.5 644,765 - SMc02273 0.56 +1.2 644,854 + SMc02273 0.57 +1.5 644,854 + SMc02273 0.57 +1.2 644,959 + SMc02273 0.58 +0.1 644,959 + SMc02273 0.58 +0.5 644,989 + SMc02273 0.59 +0.8 644,990 - SMc02273 0.59 +1.2 645,253 + SMc02273 0.62 -0.8 645,253 + SMc02273 0.62 +0.0 645,253 + SMc02273 0.62 +2.6 645,253 + SMc02273 0.62 +0.3 645,254 - SMc02273 0.62 +1.6 645,254 - SMc02273 0.62 +2.1 645,676 + SMc02273 0.68 +0.5 645,676 + SMc02273 0.68 +0.9 645,790 + SMc02273 0.69 +1.2 645,791 - SMc02273 0.69 +1.0 645,844 + SMc02273 0.70 +2.9 646,112 + SMc02273 0.74 +1.2 646,214 - SMc02273 0.75 +2.8 646,335 - SMc02273 0.77 +1.6 646,335 - SMc02273 0.77 +1.2 646,641 - SMc02273 0.81 +1.2 646,641 - SMc02273 0.81 +0.4 646,716 - SMc02273 0.82 +1.5 646,716 - SMc02273 0.82 +1.5 646,717 + SMc02273 0.82 +1.1 646,717 + SMc02273 0.82 +2.5 646,717 + SMc02273 0.82 +0.6 646,718 - SMc02273 0.82 -0.2 646,718 - SMc02273 0.82 +0.1 646,718 - SMc02273 0.82 +1.5 646,718 - SMc02273 0.82 +1.3 646,718 - SMc02273 0.82 +1.9 646,718 - SMc02273 0.82 +1.0 646,718 - SMc02273 0.82 -1.7 646,994 - SMc02273 0.85 +0.1 647,124 + SMc02273 0.87 +1.5 647,133 + SMc02273 0.87 +1.1 647,133 + SMc02273 0.87 +0.4 647,133 + SMc02273 0.87 +4.5 647,133 + SMc02273 0.87 +1.6 647,133 + SMc02273 0.87 +1.5 647,134 - SMc02273 0.87 +1.7 647,134 - SMc02273 0.87 +1.0 647,134 - SMc02273 0.87 +1.0 647,134 - SMc02273 0.87 +1.0 647,165 + SMc02273 0.88 +2.6 647,165 + SMc02273 0.88 +1.1 647,178 + SMc02273 0.88 +0.5 647,179 - SMc02273 0.88 +0.4 647,179 - SMc02273 0.88 +0.1 647,219 - SMc02273 0.88 +1.0 647,219 - SMc02273 0.88 +0.5 647,219 - SMc02273 0.88 +2.3 647,219 - SMc02273 0.88 +0.2 647,318 - SMc02273 0.90 +0.8 647,392 + +1.6 647,393 - +0.3 647,413 + +1.6 647,490 - +2.3 647,628 - -0.4 647,668 + +1.7 647,668 + +2.0 647,669 - +0.3 647,734 + +2.6 647,735 - +1.6 647,735 - +1.6 647,834 + +1.9 647,835 - +0.8 647,835 - +1.2 647,836 + +1.2 647,836 + +1.1 647,836 + +1.9 647,836 + +2.6 647,836 + +0.3 647,836 + +1.9 647,836 + +1.6 647,836 + -0.4 647,836 + +0.5 647,837 - +2.1 647,837 - +1.9 647,837 - +3.9 647,837 - +0.9 647,837 - +0.0 647,837 - -0.4 647,837 - +1.8 647,837 - +1.1 647,837 - +4.4 647,837 - +1.5 647,837 - +1.2 647,837 - +2.2 647,837 - +1.1 647,884 + +0.9 647,884 + +0.7 647,884 + +3.1 647,884 + +1.0 647,889 - -0.0 647,889 - -2.5 647,917 + +2.2 647,918 - +3.1 648,069 + +0.7 648,088 + +1.7 648,088 + +1.6 648,088 + +0.6 648,088 + +1.7 648,088 + +2.0 648,088 + +1.3 648,089 - -0.4 648,194 - +1.2 648,208 - -0.1 648,210 + +1.2 648,210 + +2.3 648,222 - +3.1 648,222 - -2.8 648,228 + +0.0 648,228 + +1.0 648,229 - -0.6 648,256 + -0.1 648,260 + +0.1 648,260 + +2.1 648,262 + +0.5 648,262 + -0.1 648,262 + +0.8 648,263 - -2.0 648,263 - -1.6 648,263 - +0.8 648,285 + +0.5 648,285 + +0.7 648,285 + -2.2 648,286 - +0.2 648,286 - -0.4 648,306 + -0.8 648,313 + -0.4 648,350 + -2.7 648,447 + -0.1 648,453 + +0.1
Or see this region's nucleotide sequence