Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc01654 and SMc01655 overlap by 11 nucleotides SMc01655 and SMc01656 are separated by 27 nucleotides SMc01656 and SMc01657 are separated by 302 nucleotides
SMc01654: SMc01654 - ABC transporter permease, at 2,451,565 to 2,452,515
SMc01654
SMc01655: SMc01655 - ABC transporter permease, at 2,452,505 to 2,453,320
SMc01655
SMc01656: SMc01656 - gamma-aminobutyraldehyde dehydrogenase, at 2,453,348 to 2,454,775
SMc01656
SMc01657: SMc01657 - ferrioxamine B receptor precursor protein, at 2,455,078 to 2,457,252
SMc01657
Position (kb)
2453
2454
2455 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2452.604 kb on + strand, within SMc01655 at 2452.632 kb on - strand, within SMc01655 at 2452.959 kb on - strand, within SMc01655 at 2452.959 kb on - strand, within SMc01655 at 2453.051 kb on + strand, within SMc01655 at 2453.273 kb on + strand at 2453.273 kb on + strand at 2453.274 kb on - strand at 2453.276 kb on + strand at 2453.277 kb on - strand at 2453.277 kb on - strand at 2453.795 kb on + strand, within SMc01656 at 2454.006 kb on + strand, within SMc01656 at 2454.006 kb on + strand, within SMc01656 at 2454.167 kb on + strand, within SMc01656 at 2454.167 kb on + strand, within SMc01656 at 2454.168 kb on - strand, within SMc01656 at 2454.168 kb on - strand, within SMc01656 at 2454.168 kb on - strand, within SMc01656 at 2454.168 kb on - strand, within SMc01656 at 2454.168 kb on - strand, within SMc01656 at 2454.206 kb on + strand, within SMc01656 at 2454.206 kb on + strand, within SMc01656 at 2454.206 kb on + strand, within SMc01656 at 2454.207 kb on - strand, within SMc01656 at 2454.319 kb on + strand, within SMc01656 at 2454.320 kb on - strand, within SMc01656 at 2454.626 kb on + strand, within SMc01656 at 2454.626 kb on + strand, within SMc01656 at 2454.627 kb on - strand, within SMc01656 at 2454.723 kb on - strand at 2454.723 kb on - strand at 2454.737 kb on + strand at 2454.738 kb on - strand at 2454.738 kb on - strand at 2454.892 kb on + strand at 2454.893 kb on - strand at 2454.992 kb on + strand at 2455.025 kb on - strand at 2455.039 kb on - strand at 2455.056 kb on - strand at 2455.058 kb on - strand at 2455.065 kb on - strand at 2455.396 kb on + strand, within SMc01657 at 2455.397 kb on - strand, within SMc01657 at 2455.398 kb on + strand, within SMc01657 at 2455.398 kb on + strand, within SMc01657 at 2455.398 kb on + strand, within SMc01657 at 2455.399 kb on - strand, within SMc01657 at 2455.424 kb on - strand, within SMc01657 at 2455.477 kb on + strand, within SMc01657 at 2455.478 kb on - strand, within SMc01657 at 2455.478 kb on - strand, within SMc01657 at 2455.479 kb on + strand, within SMc01657 at 2455.487 kb on + strand, within SMc01657 at 2455.546 kb on + strand, within SMc01657 at 2455.621 kb on + strand, within SMc01657 at 2455.621 kb on + strand, within SMc01657 at 2455.621 kb on + strand, within SMc01657 at 2455.621 kb on + strand, within SMc01657 at 2455.622 kb on - strand, within SMc01657 at 2455.696 kb on + strand, within SMc01657 at 2455.747 kb on + strand, within SMc01657 at 2455.747 kb on + strand, within SMc01657 at 2455.747 kb on + strand, within SMc01657 at 2455.747 kb on + strand, within SMc01657 at 2455.748 kb on - strand, within SMc01657
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,452,604 + SMc01655 0.12 +0.6 2,452,632 - SMc01655 0.16 +0.5 2,452,959 - SMc01655 0.56 -2.3 2,452,959 - SMc01655 0.56 -0.4 2,453,051 + SMc01655 0.67 -1.3 2,453,273 + +0.3 2,453,273 + -0.6 2,453,274 - +0.3 2,453,276 + +0.5 2,453,277 - -0.5 2,453,277 - -0.4 2,453,795 + SMc01656 0.31 -2.5 2,454,006 + SMc01656 0.46 -1.2 2,454,006 + SMc01656 0.46 -0.9 2,454,167 + SMc01656 0.57 -0.8 2,454,167 + SMc01656 0.57 +0.3 2,454,168 - SMc01656 0.57 -1.0 2,454,168 - SMc01656 0.57 +1.0 2,454,168 - SMc01656 0.57 +0.4 2,454,168 - SMc01656 0.57 +2.5 2,454,168 - SMc01656 0.57 +0.6 2,454,206 + SMc01656 0.60 +1.7 2,454,206 + SMc01656 0.60 +0.0 2,454,206 + SMc01656 0.60 +0.1 2,454,207 - SMc01656 0.60 -1.6 2,454,319 + SMc01656 0.68 +0.2 2,454,320 - SMc01656 0.68 +1.0 2,454,626 + SMc01656 0.89 -0.7 2,454,626 + SMc01656 0.89 -1.3 2,454,627 - SMc01656 0.90 -1.4 2,454,723 - -1.2 2,454,723 - -1.0 2,454,737 + -1.6 2,454,738 - +1.2 2,454,738 - -3.5 2,454,892 + +0.4 2,454,893 - -1.7 2,454,992 + +0.1 2,455,025 - +1.5 2,455,039 - -0.2 2,455,056 - -1.9 2,455,058 - -1.2 2,455,065 - -2.3 2,455,396 + SMc01657 0.15 +1.1 2,455,397 - SMc01657 0.15 +0.4 2,455,398 + SMc01657 0.15 -2.3 2,455,398 + SMc01657 0.15 -0.0 2,455,398 + SMc01657 0.15 -1.6 2,455,399 - SMc01657 0.15 +0.7 2,455,424 - SMc01657 0.16 +2.1 2,455,477 + SMc01657 0.18 -0.1 2,455,478 - SMc01657 0.18 +1.3 2,455,478 - SMc01657 0.18 +3.1 2,455,479 + SMc01657 0.18 +1.1 2,455,487 + SMc01657 0.19 -0.8 2,455,546 + SMc01657 0.22 -0.9 2,455,621 + SMc01657 0.25 -1.7 2,455,621 + SMc01657 0.25 -1.8 2,455,621 + SMc01657 0.25 -0.5 2,455,621 + SMc01657 0.25 +0.9 2,455,622 - SMc01657 0.25 -0.1 2,455,696 + SMc01657 0.28 +0.2 2,455,747 + SMc01657 0.31 -0.4 2,455,747 + SMc01657 0.31 +0.3 2,455,747 + SMc01657 0.31 +0.5 2,455,747 + SMc01657 0.31 +0.9 2,455,748 - SMc01657 0.31 -0.3
Or see this region's nucleotide sequence