Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMc00127 and SMc00095 are separated by 166 nucleotides SMc00095 and SMc00032 are separated by 143 nucleotides SMc00032 and SMc00033 are separated by 108 nucleotides
SMc00127: SMc00127 - choline sulfatase, at 1,042,618 to 1,044,156
SMc00127
SMc00095: SMc00095 - transcriptional regulator BetI, at 1,044,323 to 1,044,934
SMc00095
SMc00032: SMc00032 - hypothetical protein, at 1,045,078 to 1,045,626
SMc00032
SMc00033: SMc00033 - hypothetical protein, at 1,045,735 to 1,047,534
SMc00033
Position (kb)
1045
1046 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1044.144 kb on + strand at 1044.312 kb on + strand at 1044.313 kb on - strand at 1044.324 kb on + strand at 1044.381 kb on + strand at 1044.447 kb on + strand, within SMc00095 at 1044.447 kb on + strand, within SMc00095 at 1044.448 kb on - strand, within SMc00095 at 1044.448 kb on - strand, within SMc00095 at 1044.556 kb on - strand, within SMc00095 at 1044.556 kb on - strand, within SMc00095 at 1044.603 kb on + strand, within SMc00095 at 1044.604 kb on - strand, within SMc00095 at 1044.604 kb on - strand, within SMc00095 at 1044.856 kb on + strand, within SMc00095 at 1044.959 kb on + strand at 1045.216 kb on + strand, within SMc00032 at 1045.216 kb on + strand, within SMc00032 at 1045.217 kb on - strand, within SMc00032 at 1045.217 kb on - strand, within SMc00032 at 1045.219 kb on + strand, within SMc00032 at 1045.308 kb on - strand, within SMc00032 at 1045.324 kb on + strand, within SMc00032 at 1045.325 kb on - strand, within SMc00032 at 1045.433 kb on + strand, within SMc00032 at 1045.719 kb on - strand at 1045.757 kb on + strand at 1046.284 kb on + strand, within SMc00033 at 1046.285 kb on - strand, within SMc00033 at 1046.285 kb on - strand, within SMc00033 at 1046.285 kb on - strand, within SMc00033 at 1046.285 kb on - strand, within SMc00033 at 1046.364 kb on + strand, within SMc00033 at 1046.465 kb on - strand, within SMc00033 at 1046.490 kb on + strand, within SMc00033 at 1046.491 kb on - strand, within SMc00033 at 1046.491 kb on - strand, within SMc00033 at 1046.491 kb on - strand, within SMc00033 at 1046.491 kb on - strand, within SMc00033 at 1046.512 kb on + strand, within SMc00033
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,044,144 + +0.9 1,044,312 + -0.4 1,044,313 - -0.2 1,044,324 + -0.1 1,044,381 + +0.4 1,044,447 + SMc00095 0.20 +0.1 1,044,447 + SMc00095 0.20 -0.5 1,044,448 - SMc00095 0.20 +1.9 1,044,448 - SMc00095 0.20 +0.3 1,044,556 - SMc00095 0.38 -2.9 1,044,556 - SMc00095 0.38 -0.5 1,044,603 + SMc00095 0.46 +0.3 1,044,604 - SMc00095 0.46 -0.5 1,044,604 - SMc00095 0.46 +0.2 1,044,856 + SMc00095 0.87 +0.5 1,044,959 + -1.0 1,045,216 + SMc00032 0.25 +3.5 1,045,216 + SMc00032 0.25 +1.1 1,045,217 - SMc00032 0.25 +0.5 1,045,217 - SMc00032 0.25 +0.4 1,045,219 + SMc00032 0.26 +2.9 1,045,308 - SMc00032 0.42 +0.8 1,045,324 + SMc00032 0.45 -3.0 1,045,325 - SMc00032 0.45 +1.8 1,045,433 + SMc00032 0.65 -0.1 1,045,719 - -0.7 1,045,757 + -2.6 1,046,284 + SMc00033 0.30 -1.2 1,046,285 - SMc00033 0.31 +2.1 1,046,285 - SMc00033 0.31 -1.0 1,046,285 - SMc00033 0.31 +1.1 1,046,285 - SMc00033 0.31 -1.5 1,046,364 + SMc00033 0.35 +0.0 1,046,465 - SMc00033 0.41 +0.2 1,046,490 + SMc00033 0.42 -2.4 1,046,491 - SMc00033 0.42 -0.2 1,046,491 - SMc00033 0.42 +1.4 1,046,491 - SMc00033 0.42 +0.9 1,046,491 - SMc00033 0.42 -1.6 1,046,512 + SMc00033 0.43 +1.3
Or see this region's nucleotide sequence