Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SMa2033 and SMa2034 are separated by 930 nucleotides SMa2034 and SMa2037 are separated by 9 nucleotides
SMa2033: SMa2033 - Transglycosylase, at 1,149,915 to 1,150,712
SMa2033
SMa2034: SMa2034 - hypothetical protein, at 1,151,643 to 1,151,888
SMa2034
SMa2037: SMa2037 - Oxidoreductase, at 1,151,898 to 1,154,150
SMa2037
Position (kb)
1151
1152 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1150.718 kb on + strand at 1150.719 kb on - strand at 1150.719 kb on - strand at 1150.719 kb on - strand at 1150.735 kb on - strand at 1151.077 kb on + strand at 1151.106 kb on - strand at 1151.279 kb on + strand at 1151.371 kb on - strand at 1151.376 kb on + strand at 1151.376 kb on + strand at 1151.454 kb on + strand at 1151.508 kb on - strand at 1151.509 kb on + strand at 1151.619 kb on - strand at 1151.717 kb on - strand, within SMa2034 at 1151.811 kb on - strand, within SMa2034 at 1151.884 kb on - strand at 1151.900 kb on - strand at 1151.942 kb on + strand at 1152.079 kb on - strand at 1152.079 kb on - strand at 1152.083 kb on + strand at 1152.083 kb on + strand at 1152.084 kb on - strand at 1152.154 kb on + strand, within SMa2037 at 1152.158 kb on + strand, within SMa2037 at 1152.158 kb on + strand, within SMa2037 at 1152.158 kb on + strand, within SMa2037 at 1152.159 kb on - strand, within SMa2037 at 1152.159 kb on - strand, within SMa2037 at 1152.159 kb on - strand, within SMa2037 at 1152.160 kb on + strand, within SMa2037 at 1152.160 kb on + strand, within SMa2037 at 1152.161 kb on - strand, within SMa2037 at 1152.161 kb on - strand, within SMa2037 at 1152.161 kb on - strand, within SMa2037 at 1152.208 kb on + strand, within SMa2037 at 1152.209 kb on - strand, within SMa2037 at 1152.266 kb on - strand, within SMa2037 at 1152.317 kb on + strand, within SMa2037 at 1152.318 kb on - strand, within SMa2037 at 1152.536 kb on + strand, within SMa2037 at 1152.537 kb on - strand, within SMa2037
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,150,718 + +0.1 1,150,719 - -0.4 1,150,719 - +0.8 1,150,719 - +0.8 1,150,735 - -0.3 1,151,077 + -0.2 1,151,106 - +0.0 1,151,279 + +1.1 1,151,371 - -0.5 1,151,376 + -0.6 1,151,376 + -3.8 1,151,454 + -3.2 1,151,508 - -0.6 1,151,509 + +0.2 1,151,619 - -0.1 1,151,717 - SMa2034 0.30 -2.0 1,151,811 - SMa2034 0.68 +0.1 1,151,884 - -2.9 1,151,900 - -1.1 1,151,942 + +0.9 1,152,079 - -0.8 1,152,079 - +0.9 1,152,083 + -0.3 1,152,083 + -2.9 1,152,084 - -1.6 1,152,154 + SMa2037 0.11 +1.2 1,152,158 + SMa2037 0.12 -1.6 1,152,158 + SMa2037 0.12 -0.2 1,152,158 + SMa2037 0.12 -0.1 1,152,159 - SMa2037 0.12 +0.9 1,152,159 - SMa2037 0.12 +0.2 1,152,159 - SMa2037 0.12 -0.1 1,152,160 + SMa2037 0.12 +0.4 1,152,160 + SMa2037 0.12 -0.4 1,152,161 - SMa2037 0.12 +1.1 1,152,161 - SMa2037 0.12 -0.6 1,152,161 - SMa2037 0.12 +1.4 1,152,208 + SMa2037 0.14 -2.4 1,152,209 - SMa2037 0.14 +0.3 1,152,266 - SMa2037 0.16 -0.8 1,152,317 + SMa2037 0.19 -1.4 1,152,318 - SMa2037 0.19 -0.0 1,152,536 + SMa2037 0.28 -0.5 1,152,537 - SMa2037 0.28 -0.7
Or see this region's nucleotide sequence