Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21595 and SM_b21596 are separated by 64 nucleotides SM_b21596 and SM_b21597 are separated by 13 nucleotides SM_b21597 and SM_b21598 are separated by 233 nucleotides
SM_b21595: SM_b21595 - sugar uptake ABC transporter substrate-binding protein precursor, at 1,135,446 to 1,136,678
_b21595
SM_b21596: SM_b21596 - hypothetical protein, at 1,136,743 to 1,137,645
_b21596
SM_b21597: SM_b21597 - exported oxidoreductase, at 1,137,659 to 1,138,690
_b21597
SM_b21598: SM_b21598 - transcriptional regulator, at 1,138,924 to 1,139,973
_b21598
Position (kb)
1137
1138
1139 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 1136.662 kb on + strand at 1136.662 kb on + strand at 1136.666 kb on + strand at 1136.667 kb on - strand at 1136.834 kb on + strand, within SM_b21596 at 1136.836 kb on + strand, within SM_b21596 at 1136.836 kb on + strand, within SM_b21596 at 1136.836 kb on + strand, within SM_b21596 at 1136.837 kb on - strand, within SM_b21596 at 1137.012 kb on + strand, within SM_b21596 at 1137.029 kb on - strand, within SM_b21596 at 1137.075 kb on - strand, within SM_b21596 at 1137.075 kb on - strand, within SM_b21596 at 1137.135 kb on - strand, within SM_b21596 at 1137.275 kb on + strand, within SM_b21596 at 1137.572 kb on - strand at 1137.999 kb on + strand, within SM_b21597 at 1138.060 kb on - strand, within SM_b21597 at 1138.093 kb on - strand, within SM_b21597 at 1138.112 kb on - strand, within SM_b21597 at 1138.245 kb on - strand, within SM_b21597 at 1138.271 kb on + strand, within SM_b21597 at 1138.272 kb on - strand, within SM_b21597 at 1138.280 kb on + strand, within SM_b21597 at 1138.281 kb on - strand, within SM_b21597 at 1138.451 kb on + strand, within SM_b21597 at 1138.853 kb on + strand at 1138.853 kb on + strand at 1138.855 kb on + strand at 1138.881 kb on + strand at 1138.903 kb on + strand at 1138.904 kb on - strand at 1139.056 kb on + strand, within SM_b21598 at 1139.057 kb on - strand, within SM_b21598 at 1139.258 kb on - strand, within SM_b21598 at 1139.333 kb on + strand, within SM_b21598 at 1139.333 kb on + strand, within SM_b21598 at 1139.334 kb on - strand, within SM_b21598 at 1139.355 kb on + strand, within SM_b21598 at 1139.356 kb on - strand, within SM_b21598 at 1139.356 kb on - strand, within SM_b21598 at 1139.516 kb on - strand, within SM_b21598
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,136,662 + -0.7 1,136,662 + -0.5 1,136,666 + +0.9 1,136,667 - +1.3 1,136,834 + SM_b21596 0.10 +0.5 1,136,836 + SM_b21596 0.10 -0.6 1,136,836 + SM_b21596 0.10 +0.3 1,136,836 + SM_b21596 0.10 +2.5 1,136,837 - SM_b21596 0.10 +1.4 1,137,012 + SM_b21596 0.30 +0.9 1,137,029 - SM_b21596 0.32 -1.9 1,137,075 - SM_b21596 0.37 -0.3 1,137,075 - SM_b21596 0.37 -4.1 1,137,135 - SM_b21596 0.43 -0.8 1,137,275 + SM_b21596 0.59 +0.3 1,137,572 - -0.4 1,137,999 + SM_b21597 0.33 -0.8 1,138,060 - SM_b21597 0.39 -0.1 1,138,093 - SM_b21597 0.42 -0.4 1,138,112 - SM_b21597 0.44 -2.7 1,138,245 - SM_b21597 0.57 -0.7 1,138,271 + SM_b21597 0.59 -2.2 1,138,272 - SM_b21597 0.59 +0.8 1,138,280 + SM_b21597 0.60 -1.9 1,138,281 - SM_b21597 0.60 -2.3 1,138,451 + SM_b21597 0.77 -0.5 1,138,853 + +0.7 1,138,853 + +0.3 1,138,855 + -2.1 1,138,881 + -0.9 1,138,903 + +2.2 1,138,904 - -0.6 1,139,056 + SM_b21598 0.13 -0.1 1,139,057 - SM_b21598 0.13 -3.4 1,139,258 - SM_b21598 0.32 +2.9 1,139,333 + SM_b21598 0.39 -0.8 1,139,333 + SM_b21598 0.39 -0.8 1,139,334 - SM_b21598 0.39 -3.0 1,139,355 + SM_b21598 0.41 +0.1 1,139,356 - SM_b21598 0.41 -0.1 1,139,356 - SM_b21598 0.41 +2.1 1,139,516 - SM_b21598 0.56 -2.8
Or see this region's nucleotide sequence