Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21568 and SM_b21569 are separated by 232 nucleotides SM_b21569 and SM_b21570 are separated by 46 nucleotides SM_b21570 and SM_b21571 are separated by 141 nucleotides SM_b21571 and SM_b21572 are separated by 97 nucleotides
SM_b21568: SM_b21568 - hypothetical protein, at 1,106,876 to 1,107,148
_b21568
SM_b21569: SM_b21569 - transcriptional regulator, at 1,107,381 to 1,107,980
_b21569
SM_b21570: SM_b21570 - NADH-dependent oxidase, at 1,108,027 to 1,110,063
_b21570
SM_b21571: SM_b21571 - TetR family transcriptional regulator, at 1,110,205 to 1,110,831
_b21571
SM_b21572: SM_b21572 - amino acid uptake ABC transporter substrate-binding protein precursor, at 1,110,929 to 1,111,930
_b21572
Position (kb)
1108
1109
1110
1111 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1107.049 kb on + strand, within SM_b21568 at 1107.049 kb on + strand, within SM_b21568 at 1107.049 kb on + strand, within SM_b21568 at 1107.050 kb on - strand, within SM_b21568 at 1107.279 kb on - strand at 1107.400 kb on - strand at 1107.467 kb on - strand, within SM_b21569 at 1107.541 kb on + strand, within SM_b21569 at 1107.541 kb on + strand, within SM_b21569 at 1107.541 kb on + strand, within SM_b21569 at 1107.984 kb on + strand at 1107.984 kb on + strand at 1107.985 kb on - strand at 1107.985 kb on - strand at 1107.985 kb on - strand at 1107.985 kb on - strand at 1107.995 kb on - strand at 1108.032 kb on + strand at 1108.033 kb on - strand at 1108.048 kb on + strand at 1108.058 kb on + strand at 1108.217 kb on + strand at 1108.218 kb on - strand at 1108.218 kb on - strand at 1108.218 kb on - strand at 1108.352 kb on + strand, within SM_b21570 at 1108.353 kb on - strand, within SM_b21570 at 1108.362 kb on + strand, within SM_b21570 at 1108.363 kb on - strand, within SM_b21570 at 1108.397 kb on + strand, within SM_b21570 at 1108.398 kb on - strand, within SM_b21570 at 1108.398 kb on - strand, within SM_b21570 at 1108.744 kb on + strand, within SM_b21570 at 1108.744 kb on + strand, within SM_b21570 at 1108.745 kb on - strand, within SM_b21570 at 1108.745 kb on - strand, within SM_b21570 at 1108.980 kb on - strand, within SM_b21570 at 1108.997 kb on + strand, within SM_b21570 at 1108.997 kb on + strand, within SM_b21570 at 1108.997 kb on + strand, within SM_b21570 at 1108.997 kb on + strand, within SM_b21570 at 1108.998 kb on - strand, within SM_b21570 at 1108.998 kb on - strand, within SM_b21570 at 1108.998 kb on - strand, within SM_b21570 at 1109.015 kb on + strand, within SM_b21570 at 1109.015 kb on + strand, within SM_b21570 at 1109.015 kb on + strand, within SM_b21570 at 1109.016 kb on - strand, within SM_b21570 at 1109.016 kb on - strand, within SM_b21570 at 1109.077 kb on - strand, within SM_b21570 at 1109.207 kb on - strand, within SM_b21570 at 1109.254 kb on - strand, within SM_b21570 at 1109.260 kb on + strand, within SM_b21570 at 1109.260 kb on + strand, within SM_b21570 at 1109.260 kb on + strand, within SM_b21570 at 1109.261 kb on - strand, within SM_b21570 at 1109.312 kb on + strand, within SM_b21570 at 1109.313 kb on - strand, within SM_b21570 at 1109.313 kb on - strand, within SM_b21570 at 1109.556 kb on - strand, within SM_b21570 at 1109.835 kb on - strand, within SM_b21570 at 1109.835 kb on - strand, within SM_b21570 at 1109.934 kb on + strand at 1110.035 kb on + strand at 1110.036 kb on - strand at 1110.096 kb on + strand at 1110.096 kb on + strand at 1110.097 kb on - strand at 1110.097 kb on - strand at 1110.200 kb on + strand at 1110.268 kb on + strand, within SM_b21571 at 1110.353 kb on - strand, within SM_b21571 at 1110.431 kb on + strand, within SM_b21571 at 1110.448 kb on + strand, within SM_b21571 at 1110.449 kb on - strand, within SM_b21571 at 1110.449 kb on - strand, within SM_b21571 at 1110.449 kb on - strand, within SM_b21571 at 1110.660 kb on - strand, within SM_b21571 at 1110.660 kb on - strand, within SM_b21571 at 1110.660 kb on - strand, within SM_b21571 at 1110.660 kb on - strand, within SM_b21571 at 1110.676 kb on + strand, within SM_b21571 at 1110.677 kb on - strand, within SM_b21571 at 1110.694 kb on + strand, within SM_b21571 at 1110.695 kb on - strand, within SM_b21571 at 1110.696 kb on + strand, within SM_b21571 at 1110.722 kb on + strand, within SM_b21571 at 1110.722 kb on + strand, within SM_b21571 at 1110.722 kb on + strand, within SM_b21571 at 1110.723 kb on - strand, within SM_b21571 at 1110.829 kb on + strand at 1110.830 kb on - strand at 1110.871 kb on + strand at 1110.873 kb on + strand at 1110.874 kb on - strand at 1110.874 kb on - strand at 1110.927 kb on + strand at 1110.927 kb on + strand at 1110.928 kb on - strand at 1110.928 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,107,049 + SM_b21568 0.63 -0.2 1,107,049 + SM_b21568 0.63 +1.6 1,107,049 + SM_b21568 0.63 -1.0 1,107,050 - SM_b21568 0.64 +0.5 1,107,279 - -3.2 1,107,400 - +2.7 1,107,467 - SM_b21569 0.14 +0.7 1,107,541 + SM_b21569 0.27 +1.3 1,107,541 + SM_b21569 0.27 +0.1 1,107,541 + SM_b21569 0.27 +1.0 1,107,984 + -2.8 1,107,984 + +0.0 1,107,985 - -0.4 1,107,985 - -0.1 1,107,985 - -0.3 1,107,985 - +1.2 1,107,995 - +0.9 1,108,032 + +0.5 1,108,033 - -1.7 1,108,048 + +0.7 1,108,058 + +0.0 1,108,217 + -0.1 1,108,218 - +0.6 1,108,218 - -2.4 1,108,218 - -2.4 1,108,352 + SM_b21570 0.16 -0.2 1,108,353 - SM_b21570 0.16 +0.1 1,108,362 + SM_b21570 0.16 -0.4 1,108,363 - SM_b21570 0.16 -0.9 1,108,397 + SM_b21570 0.18 +0.1 1,108,398 - SM_b21570 0.18 +0.0 1,108,398 - SM_b21570 0.18 -1.6 1,108,744 + SM_b21570 0.35 -0.5 1,108,744 + SM_b21570 0.35 +1.5 1,108,745 - SM_b21570 0.35 -0.7 1,108,745 - SM_b21570 0.35 -0.6 1,108,980 - SM_b21570 0.47 -2.7 1,108,997 + SM_b21570 0.48 +1.3 1,108,997 + SM_b21570 0.48 +0.3 1,108,997 + SM_b21570 0.48 +0.7 1,108,997 + SM_b21570 0.48 -1.1 1,108,998 - SM_b21570 0.48 -0.4 1,108,998 - SM_b21570 0.48 -1.2 1,108,998 - SM_b21570 0.48 -3.2 1,109,015 + SM_b21570 0.49 -0.5 1,109,015 + SM_b21570 0.49 -2.7 1,109,015 + SM_b21570 0.49 -0.3 1,109,016 - SM_b21570 0.49 -0.1 1,109,016 - SM_b21570 0.49 -0.3 1,109,077 - SM_b21570 0.52 +1.3 1,109,207 - SM_b21570 0.58 +0.3 1,109,254 - SM_b21570 0.60 -1.2 1,109,260 + SM_b21570 0.61 +0.6 1,109,260 + SM_b21570 0.61 +0.3 1,109,260 + SM_b21570 0.61 +0.4 1,109,261 - SM_b21570 0.61 +0.5 1,109,312 + SM_b21570 0.63 +0.3 1,109,313 - SM_b21570 0.63 +0.6 1,109,313 - SM_b21570 0.63 -1.8 1,109,556 - SM_b21570 0.75 +1.1 1,109,835 - SM_b21570 0.89 +0.2 1,109,835 - SM_b21570 0.89 -1.6 1,109,934 + +2.9 1,110,035 + -0.2 1,110,036 - +2.0 1,110,096 + +0.6 1,110,096 + +0.7 1,110,097 - -0.4 1,110,097 - -1.4 1,110,200 + +1.1 1,110,268 + SM_b21571 0.10 -1.2 1,110,353 - SM_b21571 0.24 +0.3 1,110,431 + SM_b21571 0.36 +2.9 1,110,448 + SM_b21571 0.39 +0.7 1,110,449 - SM_b21571 0.39 -0.5 1,110,449 - SM_b21571 0.39 +1.9 1,110,449 - SM_b21571 0.39 -0.2 1,110,660 - SM_b21571 0.73 -0.0 1,110,660 - SM_b21571 0.73 -0.3 1,110,660 - SM_b21571 0.73 -1.1 1,110,660 - SM_b21571 0.73 -0.1 1,110,676 + SM_b21571 0.75 +0.2 1,110,677 - SM_b21571 0.75 -0.3 1,110,694 + SM_b21571 0.78 -0.4 1,110,695 - SM_b21571 0.78 -2.5 1,110,696 + SM_b21571 0.78 -0.3 1,110,722 + SM_b21571 0.82 -0.5 1,110,722 + SM_b21571 0.82 -1.5 1,110,722 + SM_b21571 0.82 +0.6 1,110,723 - SM_b21571 0.83 -0.7 1,110,829 + +0.3 1,110,830 - -0.3 1,110,871 + +0.1 1,110,873 + -0.4 1,110,874 - -0.5 1,110,874 - +0.1 1,110,927 + +0.2 1,110,927 + -1.1 1,110,928 - -1.2 1,110,928 - +2.1
Or see this region's nucleotide sequence