Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b21230 and SM_b21231 are separated by 68 nucleotides SM_b21231 and SM_b21232 are separated by 256 nucleotides
SM_b21230: SM_b21230 - glycosyltransferase, at 794,503 to 795,585
_b21230
SM_b21231: SM_b21231 - glycosyltransferase, at 795,654 to 796,808
_b21231
SM_b21232: SM_b21232 - nucleotide sugar epimerase dehydratase, at 797,065 to 799,167
_b21232
Position (kb) 795
796
797 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 794.666 kb on - strand, within SM_b21230 at 794.810 kb on + strand, within SM_b21230 at 794.810 kb on + strand, within SM_b21230 at 794.811 kb on - strand, within SM_b21230 at 795.016 kb on + strand, within SM_b21230 at 795.111 kb on - strand, within SM_b21230 at 795.116 kb on + strand, within SM_b21230 at 795.117 kb on - strand, within SM_b21230 at 795.152 kb on + strand, within SM_b21230 at 795.153 kb on - strand, within SM_b21230 at 795.157 kb on + strand, within SM_b21230 at 795.158 kb on - strand, within SM_b21230 at 795.179 kb on - strand, within SM_b21230 at 795.220 kb on - strand, within SM_b21230 at 795.220 kb on - strand, within SM_b21230 at 795.320 kb on + strand, within SM_b21230 at 795.320 kb on + strand, within SM_b21230 at 795.320 kb on + strand, within SM_b21230 at 795.321 kb on - strand, within SM_b21230 at 795.416 kb on - strand, within SM_b21230 at 795.425 kb on + strand, within SM_b21230 at 795.426 kb on - strand, within SM_b21230 at 795.487 kb on + strand at 795.488 kb on - strand at 795.580 kb on + strand at 795.580 kb on + strand at 795.580 kb on + strand at 795.580 kb on + strand at 795.581 kb on - strand at 795.581 kb on - strand at 795.581 kb on - strand at 795.581 kb on - strand at 795.596 kb on + strand at 795.596 kb on + strand at 795.597 kb on - strand at 795.597 kb on - strand at 795.820 kb on - strand, within SM_b21231 at 795.940 kb on + strand, within SM_b21231 at 795.940 kb on + strand, within SM_b21231 at 796.141 kb on + strand, within SM_b21231 at 796.142 kb on - strand, within SM_b21231 at 796.321 kb on + strand, within SM_b21231 at 796.322 kb on - strand, within SM_b21231 at 796.361 kb on - strand, within SM_b21231 at 796.379 kb on - strand, within SM_b21231 at 796.379 kb on - strand, within SM_b21231 at 796.426 kb on - strand, within SM_b21231 at 796.426 kb on - strand, within SM_b21231 at 796.428 kb on - strand, within SM_b21231 at 796.428 kb on - strand, within SM_b21231 at 796.495 kb on + strand, within SM_b21231 at 796.495 kb on + strand, within SM_b21231 at 796.495 kb on + strand, within SM_b21231 at 796.495 kb on + strand, within SM_b21231 at 796.496 kb on - strand, within SM_b21231 at 796.496 kb on - strand, within SM_b21231 at 796.496 kb on - strand, within SM_b21231 at 796.496 kb on - strand, within SM_b21231 at 796.514 kb on + strand, within SM_b21231 at 796.514 kb on + strand, within SM_b21231 at 796.516 kb on + strand, within SM_b21231 at 796.517 kb on - strand, within SM_b21231 at 796.517 kb on - strand, within SM_b21231 at 796.517 kb on - strand, within SM_b21231 at 796.689 kb on + strand, within SM_b21231 at 796.920 kb on + strand at 796.920 kb on + strand at 796.920 kb on + strand at 796.921 kb on - strand at 796.956 kb on - strand at 797.055 kb on + strand at 797.055 kb on + strand at 797.546 kb on + strand, within SM_b21232 at 797.607 kb on + strand, within SM_b21232 at 797.608 kb on - strand, within SM_b21232 at 797.765 kb on + strand, within SM_b21232 at 797.765 kb on + strand, within SM_b21232 at 797.766 kb on - strand, within SM_b21232 at 797.766 kb on - strand, within SM_b21232
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 794,666 - SM_b21230 0.15 +2.0 794,810 + SM_b21230 0.28 -2.3 794,810 + SM_b21230 0.28 -0.3 794,811 - SM_b21230 0.28 +1.5 795,016 + SM_b21230 0.47 -0.9 795,111 - SM_b21230 0.56 -0.9 795,116 + SM_b21230 0.57 +0.2 795,117 - SM_b21230 0.57 +2.4 795,152 + SM_b21230 0.60 +0.7 795,153 - SM_b21230 0.60 -1.5 795,157 + SM_b21230 0.60 -0.3 795,158 - SM_b21230 0.60 -0.7 795,179 - SM_b21230 0.62 -2.3 795,220 - SM_b21230 0.66 -0.3 795,220 - SM_b21230 0.66 -2.7 795,320 + SM_b21230 0.75 +1.1 795,320 + SM_b21230 0.75 +0.9 795,320 + SM_b21230 0.75 -0.9 795,321 - SM_b21230 0.76 -1.2 795,416 - SM_b21230 0.84 -2.4 795,425 + SM_b21230 0.85 -0.5 795,426 - SM_b21230 0.85 -1.1 795,487 + -0.3 795,488 - +0.7 795,580 + +0.1 795,580 + +0.2 795,580 + -0.1 795,580 + +0.3 795,581 - +0.4 795,581 - -0.1 795,581 - -1.8 795,581 - -0.1 795,596 + -1.0 795,596 + +0.5 795,597 - +0.7 795,597 - +0.3 795,820 - SM_b21231 0.14 -0.8 795,940 + SM_b21231 0.25 +0.9 795,940 + SM_b21231 0.25 +0.2 796,141 + SM_b21231 0.42 +1.3 796,142 - SM_b21231 0.42 +1.2 796,321 + SM_b21231 0.58 -1.1 796,322 - SM_b21231 0.58 -0.8 796,361 - SM_b21231 0.61 -0.8 796,379 - SM_b21231 0.63 -0.0 796,379 - SM_b21231 0.63 +1.4 796,426 - SM_b21231 0.67 -1.7 796,426 - SM_b21231 0.67 +1.4 796,428 - SM_b21231 0.67 +1.3 796,428 - SM_b21231 0.67 -0.4 796,495 + SM_b21231 0.73 -0.1 796,495 + SM_b21231 0.73 +1.0 796,495 + SM_b21231 0.73 +0.4 796,495 + SM_b21231 0.73 +0.6 796,496 - SM_b21231 0.73 +0.2 796,496 - SM_b21231 0.73 -0.6 796,496 - SM_b21231 0.73 -2.8 796,496 - SM_b21231 0.73 +2.0 796,514 + SM_b21231 0.74 +1.1 796,514 + SM_b21231 0.74 -1.2 796,516 + SM_b21231 0.75 -0.7 796,517 - SM_b21231 0.75 +0.9 796,517 - SM_b21231 0.75 +0.3 796,517 - SM_b21231 0.75 -0.6 796,689 + SM_b21231 0.90 +0.5 796,920 + +0.1 796,920 + -0.2 796,920 + -0.4 796,921 - +0.3 796,956 - -0.1 797,055 + +1.4 797,055 + +2.9 797,546 + SM_b21232 0.23 -0.5 797,607 + SM_b21232 0.26 -0.3 797,608 - SM_b21232 0.26 -0.4 797,765 + SM_b21232 0.33 -2.2 797,765 + SM_b21232 0.33 -1.4 797,766 - SM_b21232 0.33 +0.4 797,766 - SM_b21232 0.33 -1.6
Or see this region's nucleotide sequence