Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20648 and SM_b20649 are separated by 526 nucleotides SM_b20649 and SM_b20650 overlap by 4 nucleotides
SM_b20648: SM_b20648 - oxidoreductase, at 1,449,018 to 1,450,055
_b20648
SM_b20649: SM_b20649 - NAD synthetase, at 1,450,582 to 1,451,586
_b20649
SM_b20650: SM_b20650 - long-chain fatty acid CoA ligase, at 1,451,583 to 1,453,130
_b20650
Position (kb)
1450
1451
1452 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2
3
4 at 1449.633 kb on + strand, within SM_b20648 at 1449.633 kb on + strand, within SM_b20648 at 1449.633 kb on + strand, within SM_b20648 at 1449.633 kb on + strand, within SM_b20648 at 1449.633 kb on + strand, within SM_b20648 at 1449.633 kb on + strand, within SM_b20648 at 1449.634 kb on - strand, within SM_b20648 at 1449.634 kb on - strand, within SM_b20648 at 1449.634 kb on - strand, within SM_b20648 at 1449.634 kb on - strand, within SM_b20648 at 1449.640 kb on + strand, within SM_b20648 at 1449.701 kb on - strand, within SM_b20648 at 1449.748 kb on + strand, within SM_b20648 at 1449.748 kb on + strand, within SM_b20648 at 1449.748 kb on + strand, within SM_b20648 at 1449.748 kb on + strand, within SM_b20648 at 1449.749 kb on - strand, within SM_b20648 at 1449.749 kb on - strand, within SM_b20648 at 1449.752 kb on + strand, within SM_b20648 at 1449.752 kb on + strand, within SM_b20648 at 1449.753 kb on - strand, within SM_b20648 at 1449.754 kb on + strand, within SM_b20648 at 1449.754 kb on + strand, within SM_b20648 at 1449.755 kb on - strand, within SM_b20648 at 1449.839 kb on - strand, within SM_b20648 at 1450.038 kb on + strand at 1450.039 kb on - strand at 1450.092 kb on + strand at 1450.093 kb on - strand at 1450.093 kb on - strand at 1450.093 kb on - strand at 1450.225 kb on + strand at 1450.226 kb on - strand at 1450.226 kb on - strand at 1450.226 kb on - strand at 1450.226 kb on - strand at 1450.230 kb on + strand at 1450.253 kb on - strand at 1450.379 kb on - strand at 1450.410 kb on + strand at 1450.410 kb on + strand at 1450.411 kb on - strand at 1450.583 kb on + strand at 1450.770 kb on - strand, within SM_b20649 at 1450.785 kb on - strand, within SM_b20649 at 1450.785 kb on - strand, within SM_b20649 at 1450.814 kb on + strand, within SM_b20649 at 1450.814 kb on + strand, within SM_b20649 at 1450.814 kb on + strand, within SM_b20649 at 1450.814 kb on + strand, within SM_b20649 at 1450.814 kb on + strand, within SM_b20649 at 1450.815 kb on - strand, within SM_b20649 at 1450.815 kb on - strand, within SM_b20649 at 1450.880 kb on + strand, within SM_b20649 at 1450.881 kb on - strand, within SM_b20649 at 1450.881 kb on - strand, within SM_b20649 at 1450.895 kb on + strand, within SM_b20649 at 1450.896 kb on - strand, within SM_b20649 at 1450.896 kb on - strand, within SM_b20649 at 1450.962 kb on - strand, within SM_b20649 at 1451.015 kb on + strand, within SM_b20649 at 1451.016 kb on - strand, within SM_b20649 at 1451.016 kb on - strand, within SM_b20649 at 1451.016 kb on - strand, within SM_b20649 at 1451.019 kb on - strand, within SM_b20649 at 1451.049 kb on + strand, within SM_b20649 at 1451.076 kb on - strand, within SM_b20649 at 1451.148 kb on - strand, within SM_b20649 at 1451.148 kb on - strand, within SM_b20649 at 1451.148 kb on - strand, within SM_b20649 at 1451.205 kb on - strand, within SM_b20649 at 1451.246 kb on + strand, within SM_b20649 at 1451.453 kb on - strand, within SM_b20649 at 1451.912 kb on - strand, within SM_b20650 at 1452.175 kb on + strand, within SM_b20650 at 1452.175 kb on + strand, within SM_b20650 at 1452.175 kb on + strand, within SM_b20650 at 1452.175 kb on + strand, within SM_b20650 at 1452.176 kb on - strand, within SM_b20650 at 1452.176 kb on - strand, within SM_b20650 at 1452.176 kb on - strand, within SM_b20650 at 1452.176 kb on - strand, within SM_b20650 at 1452.176 kb on - strand, within SM_b20650 at 1452.205 kb on + strand, within SM_b20650 at 1452.205 kb on + strand, within SM_b20650 at 1452.214 kb on + strand, within SM_b20650 at 1452.214 kb on + strand, within SM_b20650 at 1452.214 kb on + strand, within SM_b20650 at 1452.215 kb on - strand at 1452.292 kb on + strand, within SM_b20650 at 1452.293 kb on - strand, within SM_b20650 at 1452.378 kb on - strand, within SM_b20650 at 1452.478 kb on + strand, within SM_b20650 at 1452.479 kb on - strand, within SM_b20650 at 1452.479 kb on - strand, within SM_b20650 at 1452.544 kb on + strand, within SM_b20650 at 1452.545 kb on - strand, within SM_b20650 at 1452.545 kb on - strand, within SM_b20650 at 1452.545 kb on - strand, within SM_b20650 at 1452.576 kb on - strand, within SM_b20650
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,449,633 + SM_b20648 0.59 +0.3 1,449,633 + SM_b20648 0.59 -0.1 1,449,633 + SM_b20648 0.59 -1.3 1,449,633 + SM_b20648 0.59 -2.2 1,449,633 + SM_b20648 0.59 +0.9 1,449,633 + SM_b20648 0.59 -0.5 1,449,634 - SM_b20648 0.59 +0.2 1,449,634 - SM_b20648 0.59 +1.1 1,449,634 - SM_b20648 0.59 -1.8 1,449,634 - SM_b20648 0.59 +2.4 1,449,640 + SM_b20648 0.60 +0.7 1,449,701 - SM_b20648 0.66 -0.9 1,449,748 + SM_b20648 0.70 -0.1 1,449,748 + SM_b20648 0.70 -1.8 1,449,748 + SM_b20648 0.70 -2.0 1,449,748 + SM_b20648 0.70 +3.9 1,449,749 - SM_b20648 0.70 -0.3 1,449,749 - SM_b20648 0.70 -1.1 1,449,752 + SM_b20648 0.71 -1.1 1,449,752 + SM_b20648 0.71 -1.1 1,449,753 - SM_b20648 0.71 -1.7 1,449,754 + SM_b20648 0.71 -1.7 1,449,754 + SM_b20648 0.71 -1.1 1,449,755 - SM_b20648 0.71 +0.8 1,449,839 - SM_b20648 0.79 +0.1 1,450,038 + -0.0 1,450,039 - -0.1 1,450,092 + -1.9 1,450,093 - +1.1 1,450,093 - -0.5 1,450,093 - -0.4 1,450,225 + -0.0 1,450,226 - -2.3 1,450,226 - +0.9 1,450,226 - -1.7 1,450,226 - -1.4 1,450,230 + -0.9 1,450,253 - -0.7 1,450,379 - +0.1 1,450,410 + -2.0 1,450,410 + +0.6 1,450,411 - -2.6 1,450,583 + +0.1 1,450,770 - SM_b20649 0.19 -1.8 1,450,785 - SM_b20649 0.20 -1.0 1,450,785 - SM_b20649 0.20 +0.2 1,450,814 + SM_b20649 0.23 -0.2 1,450,814 + SM_b20649 0.23 -0.1 1,450,814 + SM_b20649 0.23 +0.1 1,450,814 + SM_b20649 0.23 -1.2 1,450,814 + SM_b20649 0.23 -0.1 1,450,815 - SM_b20649 0.23 +0.3 1,450,815 - SM_b20649 0.23 +2.0 1,450,880 + SM_b20649 0.30 -0.3 1,450,881 - SM_b20649 0.30 +0.3 1,450,881 - SM_b20649 0.30 -2.1 1,450,895 + SM_b20649 0.31 +0.3 1,450,896 - SM_b20649 0.31 +0.5 1,450,896 - SM_b20649 0.31 -0.7 1,450,962 - SM_b20649 0.38 -0.1 1,451,015 + SM_b20649 0.43 -0.9 1,451,016 - SM_b20649 0.43 -1.1 1,451,016 - SM_b20649 0.43 -1.7 1,451,016 - SM_b20649 0.43 -0.5 1,451,019 - SM_b20649 0.43 -0.5 1,451,049 + SM_b20649 0.46 +0.7 1,451,076 - SM_b20649 0.49 -0.2 1,451,148 - SM_b20649 0.56 +0.2 1,451,148 - SM_b20649 0.56 +1.9 1,451,148 - SM_b20649 0.56 +0.6 1,451,205 - SM_b20649 0.62 +2.1 1,451,246 + SM_b20649 0.66 +1.7 1,451,453 - SM_b20649 0.87 -0.3 1,451,912 - SM_b20650 0.21 -0.6 1,452,175 + SM_b20650 0.38 +1.2 1,452,175 + SM_b20650 0.38 -1.1 1,452,175 + SM_b20650 0.38 +2.6 1,452,175 + SM_b20650 0.38 +0.6 1,452,176 - SM_b20650 0.38 -0.9 1,452,176 - SM_b20650 0.38 +0.9 1,452,176 - SM_b20650 0.38 -1.1 1,452,176 - SM_b20650 0.38 -0.7 1,452,176 - SM_b20650 0.38 +3.9 1,452,205 + SM_b20650 0.40 +0.6 1,452,205 + SM_b20650 0.40 -0.3 1,452,214 + SM_b20650 0.41 -1.4 1,452,214 + SM_b20650 0.41 -0.1 1,452,214 + SM_b20650 0.41 +0.2 1,452,215 - +0.9 1,452,292 + SM_b20650 0.46 -0.9 1,452,293 - SM_b20650 0.46 +0.7 1,452,378 - SM_b20650 0.51 +0.3 1,452,478 + SM_b20650 0.58 -4.9 1,452,479 - SM_b20650 0.58 +1.6 1,452,479 - SM_b20650 0.58 +0.2 1,452,544 + SM_b20650 0.62 +0.3 1,452,545 - SM_b20650 0.62 +2.2 1,452,545 - SM_b20650 0.62 -0.2 1,452,545 - SM_b20650 0.62 -1.9 1,452,576 - SM_b20650 0.64 +0.9
Or see this region's nucleotide sequence