Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SM_b20539 and SM_b20540 are separated by 867 nucleotides
SM_b20539: SM_b20539 - adenylate cyclase, at 564,786 to 566,660
_b20539
SM_b20540: SM_b20540 - hypothetical protein, at 567,528 to 567,749
_b20540
Position (kb) 564
565
566
567 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 563.796 kb on + strand at 563.796 kb on + strand at 563.796 kb on + strand at 563.836 kb on + strand at 563.836 kb on + strand at 563.836 kb on + strand at 563.836 kb on + strand at 563.837 kb on - strand at 563.842 kb on - strand at 563.903 kb on + strand at 563.962 kb on + strand at 563.962 kb on + strand at 563.963 kb on - strand at 563.963 kb on - strand at 563.994 kb on + strand at 563.994 kb on + strand at 563.994 kb on + strand at 563.995 kb on - strand at 563.995 kb on - strand at 564.132 kb on - strand at 564.160 kb on - strand at 564.191 kb on - strand at 564.221 kb on + strand at 564.222 kb on - strand at 564.298 kb on + strand at 564.418 kb on + strand at 564.418 kb on + strand at 564.418 kb on + strand at 564.418 kb on + strand at 564.418 kb on + strand at 564.418 kb on + strand at 564.418 kb on + strand at 564.418 kb on + strand at 564.419 kb on - strand at 564.419 kb on - strand at 564.419 kb on - strand at 564.431 kb on - strand at 564.536 kb on - strand at 564.541 kb on + strand at 564.555 kb on - strand at 564.555 kb on - strand at 564.689 kb on - strand at 564.764 kb on + strand at 564.765 kb on - strand at 564.838 kb on + strand at 564.839 kb on - strand at 564.839 kb on - strand at 564.839 kb on - strand at 564.846 kb on + strand at 564.847 kb on - strand at 564.847 kb on - strand at 564.849 kb on - strand at 564.879 kb on - strand at 564.893 kb on + strand at 564.913 kb on + strand at 564.914 kb on - strand at 564.936 kb on + strand at 565.039 kb on + strand, within SM_b20539 at 565.040 kb on - strand, within SM_b20539 at 565.040 kb on - strand, within SM_b20539 at 565.057 kb on + strand at 565.214 kb on + strand at 565.215 kb on - strand, within SM_b20539 at 565.296 kb on + strand, within SM_b20539 at 565.296 kb on + strand, within SM_b20539 at 565.409 kb on + strand, within SM_b20539 at 565.410 kb on - strand, within SM_b20539 at 565.411 kb on + strand, within SM_b20539 at 565.411 kb on + strand, within SM_b20539 at 565.411 kb on + strand, within SM_b20539 at 565.411 kb on + strand, within SM_b20539 at 565.412 kb on - strand, within SM_b20539 at 565.412 kb on - strand, within SM_b20539 at 565.434 kb on + strand, within SM_b20539 at 565.435 kb on - strand, within SM_b20539 at 565.463 kb on + strand, within SM_b20539 at 565.464 kb on - strand, within SM_b20539 at 565.464 kb on - strand, within SM_b20539 at 565.464 kb on - strand, within SM_b20539 at 565.518 kb on + strand, within SM_b20539 at 565.518 kb on + strand, within SM_b20539 at 565.519 kb on - strand, within SM_b20539 at 565.519 kb on - strand, within SM_b20539 at 565.578 kb on + strand, within SM_b20539 at 565.578 kb on + strand, within SM_b20539 at 565.578 kb on + strand, within SM_b20539 at 565.578 kb on + strand, within SM_b20539 at 565.579 kb on - strand, within SM_b20539 at 565.579 kb on - strand, within SM_b20539 at 565.579 kb on - strand, within SM_b20539 at 565.579 kb on - strand, within SM_b20539 at 565.581 kb on - strand, within SM_b20539 at 565.602 kb on - strand, within SM_b20539 at 565.677 kb on + strand, within SM_b20539 at 565.678 kb on - strand, within SM_b20539 at 565.727 kb on + strand, within SM_b20539 at 565.727 kb on + strand, within SM_b20539 at 565.757 kb on - strand, within SM_b20539 at 565.812 kb on + strand, within SM_b20539 at 565.813 kb on - strand, within SM_b20539 at 565.818 kb on + strand, within SM_b20539 at 565.818 kb on + strand, within SM_b20539 at 565.819 kb on - strand, within SM_b20539 at 565.821 kb on + strand, within SM_b20539 at 565.821 kb on + strand, within SM_b20539 at 565.821 kb on + strand, within SM_b20539 at 565.866 kb on + strand, within SM_b20539 at 565.883 kb on + strand, within SM_b20539 at 565.883 kb on + strand, within SM_b20539 at 565.883 kb on + strand, within SM_b20539 at 565.883 kb on + strand, within SM_b20539 at 565.884 kb on - strand, within SM_b20539 at 565.884 kb on - strand, within SM_b20539 at 565.884 kb on - strand, within SM_b20539 at 565.884 kb on - strand, within SM_b20539 at 565.884 kb on - strand, within SM_b20539 at 565.917 kb on + strand, within SM_b20539 at 565.917 kb on + strand, within SM_b20539 at 565.971 kb on + strand, within SM_b20539 at 565.971 kb on + strand, within SM_b20539 at 565.971 kb on + strand, within SM_b20539 at 566.157 kb on + strand, within SM_b20539 at 566.157 kb on + strand, within SM_b20539 at 566.158 kb on - strand, within SM_b20539 at 566.158 kb on - strand, within SM_b20539 at 566.164 kb on - strand, within SM_b20539 at 566.270 kb on + strand, within SM_b20539 at 566.309 kb on + strand, within SM_b20539 at 566.430 kb on - strand, within SM_b20539 at 566.485 kb on - strand at 566.485 kb on - strand at 566.486 kb on + strand at 566.486 kb on + strand at 566.543 kb on - strand at 566.665 kb on + strand at 566.723 kb on - strand at 566.726 kb on + strand at 566.726 kb on + strand at 566.726 kb on + strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.727 kb on - strand at 566.728 kb on + strand at 566.728 kb on + strand at 566.729 kb on - strand at 566.738 kb on + strand at 566.738 kb on + strand at 566.745 kb on + strand at 566.745 kb on + strand at 566.745 kb on + strand at 566.746 kb on - strand at 566.746 kb on - strand at 566.888 kb on + strand at 566.889 kb on - strand at 566.889 kb on - strand at 566.965 kb on - strand at 566.968 kb on - strand at 567.114 kb on + strand at 567.115 kb on - strand at 567.118 kb on - strand at 567.194 kb on + strand at 567.194 kb on + strand at 567.195 kb on - strand at 567.199 kb on + strand at 567.199 kb on + strand at 567.200 kb on - strand at 567.204 kb on - strand at 567.204 kb on - strand at 567.232 kb on + strand at 567.235 kb on + strand at 567.375 kb on + strand at 567.423 kb on + strand at 567.439 kb on + strand at 567.440 kb on - strand at 567.472 kb on + strand at 567.473 kb on - strand at 567.484 kb on + strand at 567.484 kb on + strand at 567.484 kb on + strand at 567.485 kb on - strand at 567.485 kb on - strand at 567.487 kb on + strand at 567.488 kb on - strand at 567.488 kb on - strand at 567.488 kb on - strand at 567.489 kb on + strand at 567.489 kb on + strand at 567.490 kb on - strand at 567.490 kb on - strand at 567.515 kb on + strand at 567.598 kb on - strand, within SM_b20540
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 563,796 + +0.6 563,796 + -0.9 563,796 + -1.6 563,836 + +0.5 563,836 + +0.0 563,836 + +0.6 563,836 + -0.1 563,837 - +0.3 563,842 - +2.2 563,903 + +0.1 563,962 + -0.6 563,962 + +0.2 563,963 - +0.6 563,963 - -1.4 563,994 + +2.9 563,994 + +1.9 563,994 + +0.2 563,995 - +0.0 563,995 - +0.6 564,132 - +0.0 564,160 - +0.2 564,191 - +1.2 564,221 + -0.1 564,222 - -1.4 564,298 + -1.9 564,418 + -0.2 564,418 + -0.6 564,418 + +1.0 564,418 + -1.3 564,418 + +1.1 564,418 + +0.7 564,418 + -2.2 564,418 + -0.0 564,419 - -0.5 564,419 - -1.1 564,419 - -0.3 564,431 - +0.1 564,536 - +0.5 564,541 + -0.2 564,555 - +0.7 564,555 - +0.7 564,689 - -0.6 564,764 + +1.5 564,765 - -0.5 564,838 + -0.5 564,839 - +1.0 564,839 - -1.6 564,839 - -3.1 564,846 + +2.5 564,847 - +0.5 564,847 - -1.4 564,849 - -0.6 564,879 - -1.5 564,893 + +0.2 564,913 + -0.5 564,914 - -0.4 564,936 + +0.1 565,039 + SM_b20539 0.13 -0.1 565,040 - SM_b20539 0.14 +0.8 565,040 - SM_b20539 0.14 +2.9 565,057 + +0.6 565,214 + +1.9 565,215 - SM_b20539 0.23 -0.4 565,296 + SM_b20539 0.27 +0.6 565,296 + SM_b20539 0.27 -0.0 565,409 + SM_b20539 0.33 -1.6 565,410 - SM_b20539 0.33 +0.3 565,411 + SM_b20539 0.33 +0.2 565,411 + SM_b20539 0.33 +0.4 565,411 + SM_b20539 0.33 +0.4 565,411 + SM_b20539 0.33 +1.9 565,412 - SM_b20539 0.33 +0.6 565,412 - SM_b20539 0.33 -0.8 565,434 + SM_b20539 0.35 -0.4 565,435 - SM_b20539 0.35 -0.9 565,463 + SM_b20539 0.36 +1.0 565,464 - SM_b20539 0.36 +0.1 565,464 - SM_b20539 0.36 -0.6 565,464 - SM_b20539 0.36 +0.4 565,518 + SM_b20539 0.39 -0.1 565,518 + SM_b20539 0.39 +0.4 565,519 - SM_b20539 0.39 +2.2 565,519 - SM_b20539 0.39 -0.3 565,578 + SM_b20539 0.42 -1.2 565,578 + SM_b20539 0.42 +1.1 565,578 + SM_b20539 0.42 +0.3 565,578 + SM_b20539 0.42 -0.5 565,579 - SM_b20539 0.42 -1.0 565,579 - SM_b20539 0.42 -1.3 565,579 - SM_b20539 0.42 +0.8 565,579 - SM_b20539 0.42 +0.7 565,581 - SM_b20539 0.42 +0.7 565,602 - SM_b20539 0.44 +2.9 565,677 + SM_b20539 0.48 -0.3 565,678 - SM_b20539 0.48 +0.6 565,727 + SM_b20539 0.50 +1.4 565,727 + SM_b20539 0.50 +0.6 565,757 - SM_b20539 0.52 -2.7 565,812 + SM_b20539 0.55 +0.8 565,813 - SM_b20539 0.55 -1.3 565,818 + SM_b20539 0.55 +0.2 565,818 + SM_b20539 0.55 +0.1 565,819 - SM_b20539 0.55 +1.1 565,821 + SM_b20539 0.55 -0.2 565,821 + SM_b20539 0.55 -0.9 565,821 + SM_b20539 0.55 -1.7 565,866 + SM_b20539 0.58 +1.1 565,883 + SM_b20539 0.59 +1.0 565,883 + SM_b20539 0.59 +0.1 565,883 + SM_b20539 0.59 -0.8 565,883 + SM_b20539 0.59 +0.1 565,884 - SM_b20539 0.59 -0.6 565,884 - SM_b20539 0.59 -1.2 565,884 - SM_b20539 0.59 +1.3 565,884 - SM_b20539 0.59 -1.6 565,884 - SM_b20539 0.59 +0.1 565,917 + SM_b20539 0.60 +1.6 565,917 + SM_b20539 0.60 -1.2 565,971 + SM_b20539 0.63 -0.4 565,971 + SM_b20539 0.63 -2.2 565,971 + SM_b20539 0.63 +0.5 566,157 + SM_b20539 0.73 +1.8 566,157 + SM_b20539 0.73 +0.6 566,158 - SM_b20539 0.73 -0.5 566,158 - SM_b20539 0.73 +1.0 566,164 - SM_b20539 0.73 +0.7 566,270 + SM_b20539 0.79 -0.5 566,309 + SM_b20539 0.81 +0.3 566,430 - SM_b20539 0.88 +0.3 566,485 - -0.5 566,485 - +1.2 566,486 + +0.6 566,486 + -1.0 566,543 - +0.3 566,665 + -0.6 566,723 - -0.1 566,726 + -1.6 566,726 + +0.3 566,726 + -0.3 566,727 - -0.8 566,727 - -1.6 566,727 - -0.5 566,727 - -1.3 566,727 - -0.2 566,727 - -1.6 566,728 + +0.9 566,728 + -0.1 566,729 - +0.2 566,738 + +0.2 566,738 + +0.1 566,745 + -1.8 566,745 + -0.1 566,745 + -3.6 566,746 - +0.6 566,746 - -1.6 566,888 + +1.0 566,889 - +1.4 566,889 - +0.4 566,965 - +3.2 566,968 - +0.2 567,114 + -0.3 567,115 - -0.4 567,118 - +1.7 567,194 + +1.1 567,194 + +0.4 567,195 - +0.1 567,199 + +2.2 567,199 + -0.3 567,200 - -0.2 567,204 - -1.8 567,204 - +0.1 567,232 + +1.0 567,235 + -2.2 567,375 + +0.6 567,423 + -0.4 567,439 + -0.5 567,440 - -0.3 567,472 + +0.4 567,473 - +1.1 567,484 + -0.5 567,484 + +0.5 567,484 + +2.6 567,485 - -0.4 567,485 - +0.4 567,487 + -0.2 567,488 - -2.6 567,488 - +0.4 567,488 - +0.9 567,489 + -0.9 567,489 + -1.6 567,490 - -0.2 567,490 - -0.9 567,515 + +0.5 567,598 - SM_b20540 0.32 -0.6
Or see this region's nucleotide sequence