Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03192

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
3,352,831	+		CCNA_03191	0.62	-0.4
3,352,834	-		CCNA_03191	0.63	+0.3
3,352,834	-		CCNA_03191	0.63	+1.1
3,352,834	-		CCNA_03191	0.63	-0.3
3,352,908	-		CCNA_03191	0.66	+0.4
3,352,917	+		CCNA_03191	0.66	-1.8
3,352,922	+		CCNA_03191	0.67	+0.2
3,352,922	+		CCNA_03191	0.67	-2.4
3,352,922	+		CCNA_03191	0.67	+0.2
3,352,922	+		CCNA_03191	0.67	-0.1
3,352,930	-		CCNA_03191	0.67	-1.1
3,352,930	-		CCNA_03191	0.67	-0.9
3,352,930	-		CCNA_03191	0.67	-0.4
3,352,930	-		CCNA_03191	0.67	-1.3
3,352,990	-		CCNA_03191	0.70	-0.9
3,352,992	-		CCNA_03191	0.70	+0.8
3,353,001	+		CCNA_03191	0.70	-0.0
3,353,010	+				+1.2
3,353,017	+		CCNA_03191	0.71	-0.9
3,353,017	+		CCNA_03191	0.71	-0.5
3,353,017	+		CCNA_03191	0.71	-0.1
3,353,023	-		CCNA_03191	0.71	+0.0
3,353,025	-		CCNA_03191	0.71	-0.7
3,353,025	-		CCNA_03191	0.71	+1.2
3,353,025	-		CCNA_03191	0.71	-2.2
3,353,025	-		CCNA_03191	0.71	-1.4
3,353,027	+		CCNA_03191	0.71	+2.0
3,353,130	-		CCNA_03191	0.76	-0.2
3,353,145	+		CCNA_03191	0.76	-0.3
3,353,145	+		CCNA_03191	0.76	+1.9
3,353,145	+		CCNA_03191	0.76	+0.3
3,353,145	+		CCNA_03191	0.76	-1.7
3,353,145	+		CCNA_03191	0.76	+0.2
3,353,147	+		CCNA_03191	0.77	+1.2
3,353,153	-		CCNA_03191	0.77	-0.7
3,353,153	-		CCNA_03191	0.77	-0.4
3,353,153	-		CCNA_03191	0.77	+0.2
3,353,153	-		CCNA_03191	0.77	-1.1
3,353,153	-		CCNA_03191	0.77	-1.1
3,353,153	-		CCNA_03191	0.77	+1.3
3,353,153	-		CCNA_03191	0.77	+0.1
3,353,155	-		CCNA_03191	0.77	-0.2
3,353,179	+		CCNA_03191	0.78	+0.8
3,353,199	+		CCNA_03191	0.79	+1.4
3,353,199	+		CCNA_03191	0.79	-1.0
3,353,219	-		CCNA_03191	0.80	-0.8
3,353,234	+		CCNA_03191	0.80	-1.4
3,353,240	+		CCNA_03191	0.81	-0.2
3,353,240	+		CCNA_03191	0.81	-1.3
3,353,240	+		CCNA_03191	0.81	-1.0
3,353,242	-		CCNA_03191	0.81	+0.7
3,353,248	-		CCNA_03191	0.81	-0.2
3,353,248	-		CCNA_03191	0.81	-0.6
3,353,248	-		CCNA_03191	0.81	+0.9
3,353,257	+		CCNA_03191	0.81	-1.6
3,353,259	-		CCNA_03191	0.82	+1.1
3,353,291	+		CCNA_03191	0.83	-2.8
3,353,423	+		CCNA_03191	0.89	-1.5
3,353,485	+				-1.3
3,353,485	+				-1.2
3,353,493	-				-1.0
3,353,539	+				-1.0
3,353,576	+				+0.3
3,353,576	+				-1.5
3,353,576	+				-0.6
3,353,599	+				+0.2
3,353,617	+				+1.1
3,353,656	+				-0.2
3,353,664	+				-1.0
3,353,672	-				-0.9
3,353,680	+				-1.5
3,353,913	-		CCNA_03192	0.13	-0.2
3,353,930	+		CCNA_03192	0.16	-0.7
3,353,930	+		CCNA_03192	0.16	+0.2
3,353,930	+		CCNA_03192	0.16	-1.5
3,353,930	+		CCNA_03192	0.16	-1.0
3,353,938	-		CCNA_03192	0.17	+0.4
3,353,950	+		CCNA_03192	0.19	+0.8
3,353,964	+		CCNA_03192	0.21	-2.6
3,353,964	+		CCNA_03192	0.21	-2.2
3,353,972	-		CCNA_03192	0.23	+0.1
3,354,003	+		CCNA_03192	0.28	-0.1
3,354,011	-		CCNA_03192	0.29	-1.4
3,354,011	-		CCNA_03192	0.29	-0.2
3,354,049	+		CCNA_03192	0.35	-2.4
3,354,049	+		CCNA_03192	0.35	+0.3
3,354,057	-		CCNA_03192	0.36	-0.3
3,354,058	-		CCNA_03192	0.36	-1.1
3,354,058	-		CCNA_03192	0.36	-0.6
3,354,068	+		CCNA_03192	0.38	-0.4
3,354,068	+		CCNA_03192	0.38	+0.2
3,354,068	+		CCNA_03192	0.38	-0.1
3,354,068	+		CCNA_03192	0.38	-2.0
3,354,068	+		CCNA_03192	0.38	-1.3
3,354,068	+		CCNA_03192	0.38	-2.1
3,354,068	+		CCNA_03192	0.38	-1.6
3,354,068	+		CCNA_03192	0.38	-2.0
3,354,068	+		CCNA_03192	0.38	+0.5
3,354,068	+		CCNA_03192	0.38	+0.2
3,354,068	+		CCNA_03192	0.38	+0.2
3,354,068	+		CCNA_03192	0.38	+0.2
3,354,068	+		CCNA_03192	0.38	-1.4
3,354,068	+		CCNA_03192	0.38	-0.6
3,354,068	+		CCNA_03192	0.38	-0.9
3,354,076	-		CCNA_03192	0.39	-1.7
3,354,076	-		CCNA_03192	0.39	-0.5
3,354,076	-		CCNA_03192	0.39	+0.1
3,354,076	-		CCNA_03192	0.39	-0.5
3,354,076	-		CCNA_03192	0.39	+0.0
3,354,085	+		CCNA_03192	0.40	-0.6
3,354,114	-		CCNA_03192	0.45	+0.9
3,354,116	+		CCNA_03192	0.45	-0.8
3,354,116	+		CCNA_03192	0.45	-0.3
3,354,124	-		CCNA_03192	0.47	+0.2
3,354,124	-		CCNA_03192	0.47	+0.6
3,354,139	+		CCNA_03192	0.49	-0.2
3,354,156	-		CCNA_03192	0.52	-2.0
3,354,156	-				+1.9
3,354,156	-		CCNA_03192	0.52	+1.6
3,354,203	+		CCNA_03192	0.59	+1.6
3,354,218	+		CCNA_03192	0.61	+0.2
3,354,218	+		CCNA_03192	0.61	-1.0
3,354,218	+		CCNA_03192	0.61	-0.9
3,354,218	+		CCNA_03192	0.61	-0.7
3,354,218	+		CCNA_03192	0.61	-0.7
3,354,226	-		CCNA_03192	0.63	+0.2
3,354,229	+		CCNA_03192	0.63	+0.4
3,354,238	+		CCNA_03192	0.64	-0.6
3,354,281	+		CCNA_03192	0.71	-1.5
3,354,281	+		CCNA_03192	0.71	-0.9
3,354,281	+		CCNA_03192	0.71	-0.5
3,354,289	-		CCNA_03192	0.72	-0.1
3,354,289	-		CCNA_03192	0.72	-1.4
3,354,289	-		CCNA_03192	0.72	-2.9
3,354,312	-		CCNA_03192	0.76	-1.6
3,354,317	+		CCNA_03192	0.77	-1.3
3,354,379	-		CCNA_03192	0.87	-2.3
3,354,387	+		CCNA_03192	0.88	-0.5
3,354,387	+		CCNA_03192	0.88	-0.3
3,354,399	+		CCNA_03192	0.90	-2.0
3,354,399	+		CCNA_03192	0.90	-2.3
3,354,407	-				-0.3
3,354,407	-				-1.1
3,354,414	-				+0.4
3,354,430	-				-0.1
3,354,444	+				-0.7
3,354,469	+				-0.4
3,354,487	-				-0.7
3,354,561	-		CCNA_03193	0.17	+0.1
3,354,565	+		CCNA_03193	0.18	+0.8
3,354,565	+		CCNA_03193	0.18	-1.7
3,354,569	-		CCNA_03193	0.18	+1.1
3,354,573	-		CCNA_03193	0.19	+0.8
3,354,677	+		CCNA_03193	0.37	+0.4
3,354,690	+		CCNA_03193	0.39	-0.4
3,354,720	-		CCNA_03193	0.44	+0.6
3,354,725	-		CCNA_03193	0.45	+0.5
3,354,746	+		CCNA_03193	0.49	+0.2
3,354,746	+		CCNA_03193	0.49	+1.0
3,354,746	+		CCNA_03193	0.49	+0.2
3,354,746	+		CCNA_03193	0.49	+2.0
3,354,754	-		CCNA_03193	0.50	-0.7
3,354,766	-		CCNA_03193	0.52	+1.1
3,354,766	-		CCNA_03193	0.52	+0.2
3,354,774	-		CCNA_03193	0.54	-0.8
3,354,775	-		CCNA_03193	0.54	-0.2
3,354,775	-		CCNA_03193	0.54	-0.6
3,354,775	-		CCNA_03193	0.54	-0.1
3,354,817	+		CCNA_03193	0.61	-1.5
3,354,823	+		CCNA_03193	0.62	-0.8
3,354,830	-		CCNA_03193	0.63	+0.4
3,354,836	-		CCNA_03193	0.64	+0.2
3,354,867	-		CCNA_03193	0.70	+1.2
3,354,869	+				+0.9
3,354,887	+		CCNA_03193	0.73	-1.0
3,354,887	+		CCNA_03193	0.73	+1.0
3,354,887	+		CCNA_03193	0.73	-1.3
3,354,887	+		CCNA_03193	0.73	+0.7
3,354,887	+		CCNA_03193	0.73	+1.6
3,354,887	+		CCNA_03193	0.73	-1.7
3,354,887	+		CCNA_03193	0.73	-2.3
3,354,895	-		CCNA_03193	0.75	+1.2
3,354,895	-		CCNA_03193	0.75	-0.8
3,354,895	-		CCNA_03193	0.75	-1.2
3,354,895	-		CCNA_03193	0.75	+0.2
3,354,895	-		CCNA_03193	0.75	-2.8
3,354,895	-		CCNA_03193	0.75	+1.9
3,354,895	-		CCNA_03193	0.75	-0.4
3,354,895	-		CCNA_03193	0.75	-1.0
3,354,909	+		CCNA_03193	0.77	-1.3
3,354,915	+		CCNA_03193	0.78	-1.7
3,354,917	+		CCNA_03193	0.78	-0.7
3,354,917	+		CCNA_03193	0.78	+1.2
3,354,925	-		CCNA_03193	0.80	+0.6
3,354,925	-		CCNA_03193	0.80	+1.0
3,354,932	+		CCNA_03193	0.81	-0.4
3,354,950	-		CCNA_03193	0.84	-0.1
3,354,960	-		CCNA_03193	0.86	+1.4
3,354,963	+		CCNA_03193	0.86	-1.0
3,355,090	-				-0.1
3,355,122	-		CCNA_03194	0.18	+0.0
3,355,122	-		CCNA_03194	0.18	+0.7
3,355,159	+		CCNA_03194	0.29	-0.6
3,355,159	+		CCNA_03194	0.29	-1.2
3,355,167	-		CCNA_03194	0.31	+0.9
3,355,167	-		CCNA_03194	0.31	+0.0
3,355,167	-		CCNA_03194	0.31	+1.0
3,355,167	-		CCNA_03194	0.31	+1.1
3,355,167	-		CCNA_03194	0.31	+0.1
3,355,167	-		CCNA_03194	0.31	+0.8
3,355,169	+		CCNA_03194	0.31	-1.1
3,355,177	-		CCNA_03194	0.34	+0.0
3,355,228	-		CCNA_03194	0.48	-0.3
3,355,233	-		CCNA_03194	0.49	-0.4
3,355,241	+		CCNA_03194	0.51	-1.1
3,355,249	-		CCNA_03194	0.53	+0.9
3,355,249	-		CCNA_03194	0.53	-0.2
3,355,270	-		CCNA_03194	0.59	+0.2
3,355,314	-		CCNA_03194	0.71	+1.0
3,355,319	-		CCNA_03194	0.73	+1.6
3,355,319	-		CCNA_03194	0.73	+1.4
3,355,332	-		CCNA_03194	0.76	-1.3
3,355,332	-		CCNA_03194	0.76	-0.2
3,355,341	+		CCNA_03194	0.79	-0.8
3,355,355	+		CCNA_03194	0.83	+1.3
3,355,412	+				-0.5
3,355,412	+				-0.1
3,355,412	+				+0.2
3,355,420	+				-0.3
3,355,420	-				-0.4
3,355,420	-				+0.0
3,355,445	+				+0.6
3,355,446	+				-1.8