Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02875

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
3,023,178	-				-0.2
3,023,254	-				-1.7
3,023,261	-				-0.7
3,023,263	+				-1.8
3,023,268	-				+0.0
3,023,347	+				+0.9
3,023,442	+				-0.2
3,023,447	+				-0.2
3,023,451	+				+0.0
3,023,451	+				+0.2
3,023,473	+		CCNA_02873	0.10	+0.0
3,023,502	+		CCNA_02873	0.18	+0.6
3,023,505	-		CCNA_02873	0.19	-0.9
3,023,509	+		CCNA_02873	0.20	-1.0
3,023,509	+		CCNA_02873	0.20	-0.2
3,023,544	+		CCNA_02873	0.30	+2.1
3,023,544	+		CCNA_02873	0.30	+3.5
3,023,552	-		CCNA_02873	0.32	-1.5
3,023,574	-		CCNA_02873	0.38	+0.7
3,023,600	+				+0.7
3,023,617	+		CCNA_02873	0.50	+0.2
3,023,623	+		CCNA_02873	0.52	+2.2
3,023,638	+		CCNA_02873	0.56	+1.2
3,023,660	+		CCNA_02873	0.62	+0.0
3,023,660	+		CCNA_02873	0.62	-1.7
3,023,668	-		CCNA_02873	0.64	-0.6
3,023,688	+		CCNA_02873	0.69	+0.2
3,023,696	-		CCNA_02873	0.72	-0.7
3,023,716	+		CCNA_02873	0.77	+0.8
3,023,755	+		CCNA_02873	0.88	-2.0
3,023,771	+				-0.0
3,023,777	-				-0.4
3,023,839	+		CCNA_02874	0.16	-0.3
3,023,839	+		CCNA_02874	0.16	-0.7
3,023,846	+		CCNA_02874	0.18	-0.1
3,023,847	-		CCNA_02874	0.18	-0.4
3,023,847	-				+0.9
3,023,847	-		CCNA_02874	0.18	+1.2
3,023,847	-		CCNA_02874	0.18	+0.2
3,023,871	+		CCNA_02874	0.24	+0.9
3,023,872	+		CCNA_02874	0.24	+0.8
3,023,887	+		CCNA_02874	0.28	+0.6
3,023,887	+		CCNA_02874	0.28	+1.0
3,023,897	+		CCNA_02874	0.30	-0.2
3,023,932	+		CCNA_02874	0.38	-1.3
3,023,940	-		CCNA_02874	0.40	+0.0
3,023,957	-		CCNA_02874	0.44	+0.0
3,023,959	-		CCNA_02874	0.45	-1.2
3,023,963	-		CCNA_02874	0.46	+0.2
3,024,001	+		CCNA_02874	0.55	-1.1
3,024,096	-		CCNA_02874	0.78	-1.2
3,024,106	-		CCNA_02874	0.80	-1.8
3,024,142	+		CCNA_02874	0.89	-0.3
3,024,142	+		CCNA_02874	0.89	-0.6
3,024,147	+				-0.5
3,024,150	-				-0.1
3,024,171	+				+2.5
3,024,177	-				-1.3
3,024,217	+				+0.0
3,024,217	+				+0.9
3,024,225	-		CCNA_02875	0.12	-2.0
3,024,236	+		CCNA_02875	0.15	-0.2
3,024,259	+		CCNA_02875	0.20	+1.9
3,024,280	+		CCNA_02875	0.26	-1.3
3,024,335	+		CCNA_02875	0.39	+1.4
3,024,335	+		CCNA_02875	0.39	+1.7
3,024,335	+		CCNA_02875	0.39	+1.2
3,024,340	+		CCNA_02875	0.41	+0.0
3,024,342	+		CCNA_02875	0.41	+0.6
3,024,343	-		CCNA_02875	0.41	+0.0
3,024,381	-		CCNA_02875	0.51	+0.9
3,024,385	+		CCNA_02875	0.52	+1.0
3,024,401	-		CCNA_02875	0.56	-0.0
3,024,418	+		CCNA_02875	0.60	+0.1
3,024,435	+		CCNA_02875	0.64	+1.0
3,024,449	+		CCNA_02875	0.68	-0.5
3,024,532	-		CCNA_02875	0.89	+2.9
3,024,629	+				+0.2
3,024,655	+				-0.2
3,024,663	-				+0.7
3,024,666	-				+1.5
3,024,757	-		CCNA_02877	0.13	-0.7
3,024,762	-		CCNA_02877	0.13	+0.8
3,024,774	-		CCNA_02877	0.14	-0.4
3,024,780	-		CCNA_02877	0.14	-0.9
3,024,885	-		CCNA_02877	0.22	-0.2
3,024,915	+		CCNA_02877	0.25	-0.7
3,024,924	-		CCNA_02877	0.25	-0.4
3,024,930	+		CCNA_02877	0.26	+0.0
3,024,945	-		CCNA_02877	0.27	-2.2
3,024,965	-		CCNA_02877	0.28	-0.2
3,025,023	+		CCNA_02877	0.33	+0.1
3,025,028	+		CCNA_02877	0.33	+2.2
3,025,028	+		CCNA_02877	0.33	+0.0
3,025,028	+		CCNA_02877	0.33	-1.1
3,025,028	+		CCNA_02877	0.33	+0.7
3,025,028	+		CCNA_02877	0.33	-1.1
3,025,028	+		CCNA_02877	0.33	-0.1
3,025,028	+		CCNA_02877	0.33	-1.2
3,025,028	+		CCNA_02877	0.33	-0.6
3,025,028	+		CCNA_02877	0.33	+0.7
3,025,028	+				+1.9
3,025,028	+		CCNA_02877	0.33	+0.3
3,025,028	+		CCNA_02877	0.33	-1.3
3,025,028	+		CCNA_02877	0.33	+0.2
3,025,028	+		CCNA_02877	0.33	+0.3
3,025,028	+		CCNA_02877	0.33	-0.0
3,025,028	+		CCNA_02877	0.33	-1.7
3,025,028	+		CCNA_02877	0.33	-0.5
3,025,028	+		CCNA_02877	0.33	-0.2
3,025,028	+		CCNA_02877	0.33	-0.7
3,025,028	+		CCNA_02877	0.33	-0.8
3,025,031	-		CCNA_02877	0.33	-0.4
3,025,036	-		CCNA_02877	0.34	-1.1
3,025,036	-		CCNA_02877	0.34	-0.7
3,025,036	-		CCNA_02877	0.34	+1.5
3,025,036	-		CCNA_02877	0.34	-1.0
3,025,036	-		CCNA_02877	0.34	-0.1
3,025,036	-		CCNA_02877	0.34	-0.3
3,025,036	-		CCNA_02877	0.34	-0.4
3,025,036	-		CCNA_02877	0.34	-0.7
3,025,082	+		CCNA_02877	0.37	-1.6
3,025,117	+		CCNA_02877	0.40	-1.4
3,025,132	+		CCNA_02877	0.41	-2.1
3,025,140	-		CCNA_02877	0.41	-0.1
3,025,231	+		CCNA_02877	0.48	-1.5
3,025,232	-		CCNA_02877	0.48	-0.7
3,025,232	-		CCNA_02877	0.48	-0.8
3,025,262	+		CCNA_02877	0.51	+0.5
3,025,267	+		CCNA_02877	0.51	+1.2
3,025,289	+		CCNA_02877	0.53	+0.0
3,025,293	+		CCNA_02877	0.53	+0.7
3,025,358	+		CCNA_02877	0.58	-2.1
3,025,358	+		CCNA_02877	0.58	+0.5
3,025,358	+		CCNA_02877	0.58	+0.9
3,025,358	+		CCNA_02877	0.58	-0.4
3,025,366	-				+0.9
3,025,376	+		CCNA_02877	0.59	-0.1
3,025,376	+		CCNA_02877	0.59	-1.2
3,025,389	-		CCNA_02877	0.60	-1.7
3,025,428	+		CCNA_02877	0.63	+0.6
3,025,463	+		CCNA_02877	0.66	+1.2
3,025,473	+		CCNA_02877	0.67	-1.2
3,025,473	+		CCNA_02877	0.67	-1.1
3,025,473	+		CCNA_02877	0.67	-0.7
3,025,473	+		CCNA_02877	0.67	-1.4
3,025,473	+		CCNA_02877	0.67	-1.5
3,025,473	+		CCNA_02877	0.67	-0.8
3,025,473	+		CCNA_02877	0.67	-1.1
3,025,473	+		CCNA_02877	0.67	-0.1
3,025,473	+		CCNA_02877	0.67	+1.9
3,025,473	+		CCNA_02877	0.67	-1.4
3,025,473	+		CCNA_02877	0.67	+0.0
3,025,473	+		CCNA_02877	0.67	-0.9
3,025,481	-		CCNA_02877	0.67	+0.6
3,025,481	-		CCNA_02877	0.67	-1.4
3,025,481	-		CCNA_02877	0.67	+0.4
3,025,481	-		CCNA_02877	0.67	-0.9
3,025,481	-		CCNA_02877	0.67	-0.7
3,025,481	-		CCNA_02877	0.67	+1.0
3,025,481	-		CCNA_02877	0.67	+0.5
3,025,481	-		CCNA_02877	0.67	+0.3
3,025,481	-		CCNA_02877	0.67	-0.7
3,025,481	-		CCNA_02877	0.67	-0.5
3,025,481	-		CCNA_02877	0.67	-0.7
3,025,481	-		CCNA_02877	0.67	+0.0
3,025,481	-		CCNA_02877	0.67	+1.9
3,025,481	-		CCNA_02877	0.67	-0.1
3,025,481	-		CCNA_02877	0.67	-1.1
3,025,486	-		CCNA_02877	0.67	-0.1
3,025,486	-		CCNA_02877	0.67	-1.0
3,025,486	-		CCNA_02877	0.67	-0.0
3,025,530	-		CCNA_02877	0.71	+0.9