Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02380

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
2,522,017	+		CCNA_02378	0.43	-2.5
2,522,024	+		CCNA_02378	0.44	+0.3
2,522,024	+		CCNA_02378	0.44	+0.1
2,522,032	-		CCNA_02378	0.45	-0.5
2,522,037	-		CCNA_02378	0.46	+0.5
2,522,042	-		CCNA_02378	0.47	-2.5
2,522,100	+		CCNA_02378	0.54	+0.3
2,522,113	-		CCNA_02378	0.56	+1.7
2,522,165	+		CCNA_02378	0.63	+0.7
2,522,165	+		CCNA_02378	0.63	-0.1
2,522,165	+		CCNA_02378	0.63	-1.4
2,522,173	-		CCNA_02378	0.64	-0.2
2,522,173	-		CCNA_02378	0.64	+0.4
2,522,173	-		CCNA_02378	0.64	+0.9
2,522,188	-		CCNA_02378	0.66	-0.9
2,522,217	+		CCNA_02378	0.70	+0.7
2,522,232	+		CCNA_02378	0.72	+1.0
2,522,232	+		CCNA_02378	0.72	+0.9
2,522,232	+		CCNA_02378	0.72	+1.1
2,522,240	-		CCNA_02378	0.73	+1.1
2,522,240	-		CCNA_02378	0.73	-0.6
2,522,240	-		CCNA_02378	0.73	-0.3
2,522,240	-		CCNA_02378	0.73	-0.9
2,522,240	-		CCNA_02378	0.73	+0.2
2,522,240	-		CCNA_02378	0.73	+0.2
2,522,245	+		CCNA_02378	0.74	+2.2
2,522,263	+		CCNA_02378	0.76	+0.7
2,522,265	+		CCNA_02378	0.77	+1.2
2,522,273	-		CCNA_02378	0.78	-0.4
2,522,307	+		CCNA_02378	0.82	+1.3
2,522,328	-		CCNA_02378	0.85	+0.9
2,522,343	-		CCNA_02378	0.87	+0.5
2,522,398	+				+0.0
2,522,470	-				+0.7
2,522,484	-				+1.7
2,522,491	-				+0.9
2,522,502	+				-0.7
2,522,600	-		CCNA_02379	0.19	+1.4
2,522,606	-		CCNA_02379	0.20	+1.1
2,522,615	+		CCNA_02379	0.22	-2.1
2,522,623	-		CCNA_02379	0.24	+1.6
2,522,629	+		CCNA_02379	0.25	+1.1
2,522,661	-		CCNA_02379	0.32	+1.3
2,522,678	-		CCNA_02379	0.35	+1.4
2,522,792	-		CCNA_02379	0.59	+1.0
2,522,845	+		CCNA_02379	0.70	-0.4
2,522,845	+		CCNA_02379	0.70	-0.1
2,522,845	+		CCNA_02379	0.70	+0.5
2,522,853	-		CCNA_02379	0.72	+1.7
2,522,853	-		CCNA_02379	0.72	+1.0
2,522,853	-		CCNA_02379	0.72	+1.4
2,522,853	-		CCNA_02379	0.72	+0.2
2,522,853	-		CCNA_02379	0.72	+1.1
2,522,853	-		CCNA_02379	0.72	+1.2
2,522,853	-		CCNA_02379	0.72	+1.5
2,522,868	-		CCNA_02379	0.75	+1.3
2,522,878	-		CCNA_02379	0.77	+0.8
2,522,881	+		CCNA_02379	0.78	-1.0
2,522,884	-		CCNA_02379	0.78	+1.4
2,522,903	-		CCNA_02379	0.82	+1.4
2,522,978	-				+1.3
2,523,155	-		CCNA_02380	0.46	+0.3
2,523,551	-				-0.2
2,523,629	-		CCNA_02381	0.16	-0.6
2,523,739	-		CCNA_02381	0.33	-0.6
2,523,772	+		CCNA_02381	0.38	-0.9
2,523,772	+		CCNA_02381	0.38	-1.7
2,523,847	-		CCNA_02381	0.49	+1.1
2,523,852	+		CCNA_02381	0.50	+2.3
2,523,858	-		CCNA_02381	0.51	-1.9
2,523,892	+		CCNA_02381	0.56	+0.3
2,523,907	+		CCNA_02381	0.59	+1.9
2,524,011	+		CCNA_02381	0.75	-0.1
2,524,019	-		CCNA_02381	0.76	-0.6
2,524,035	+		CCNA_02381	0.78	-0.6
2,524,035	+		CCNA_02381	0.78	+1.1
2,524,035	+		CCNA_02381	0.78	+0.8
2,524,035	+		CCNA_02381	0.78	+0.7
2,524,035	+		CCNA_02381	0.78	-0.1
2,524,043	-		CCNA_02381	0.79	-0.2
2,524,043	-		CCNA_02381	0.79	-1.0
2,524,043	-		CCNA_02381	0.79	+1.4
2,524,043	-		CCNA_02381	0.79	+0.2
2,524,043	-		CCNA_02381	0.79	-0.3
2,524,043	-		CCNA_02381	0.79	-0.3
2,524,043	-		CCNA_02381	0.79	+1.4
2,524,045	+		CCNA_02381	0.80	-0.8
2,524,045	+		CCNA_02381	0.80	-0.4
2,524,082	+		CCNA_02381	0.85	-0.2
2,524,145	-				-0.5
2,524,145	-				+1.2
2,524,145	-				-1.0
2,524,170	-				+0.3
2,524,188	-				+0.5
2,524,253	-				-0.9
2,524,287	-		CCNA_02382	0.12	-0.2
2,524,290	+		CCNA_02382	0.12	+0.5
2,524,298	-		CCNA_02382	0.13	-0.2
2,524,299	-		CCNA_02382	0.13	+0.7
2,524,332	+		CCNA_02382	0.17	+0.5
2,524,342	+		CCNA_02382	0.18	-0.7