Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02283

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
2,432,398	+		CCNA_02281	0.81	+0.5
2,432,430	+		CCNA_02281	0.83	-1.1
2,432,438	-		CCNA_02281	0.83	-1.4
2,432,438	-		CCNA_02281	0.83	-0.4
2,432,441	+		CCNA_02281	0.83	-0.6
2,432,492	-		CCNA_02281	0.86	+1.7
2,432,499	-		CCNA_02281	0.86	-1.6
2,432,571	+				-0.5
2,432,575	-				+0.3
2,432,579	-				-0.6
2,432,614	+				-0.1
2,432,621	+				-0.6
2,432,622	-				+1.1
2,432,635	+				-0.4
2,432,635	+				-1.4
2,432,635	+				-0.5
2,432,635	+				-0.2
2,432,635	+				+0.9
2,432,635	+				+0.0
2,432,635	+				-0.5
2,432,635	+				-0.2
2,432,643	-				-1.4
2,432,643	-				-0.7
2,432,643	-				-0.2
2,432,643	-				-0.5
2,432,643	-				+0.6
2,432,650	-				-0.8
2,432,656	+				-0.9
2,432,721	-				-1.1
2,432,721	-				-0.8
2,432,723	-				-2.1
2,432,760	+				+0.6
2,432,760	+				-0.0
2,432,768	-				-0.1
2,432,768	-				-1.2
2,432,775	+				-0.7
2,432,783	-				-1.3
2,432,806	+				-1.2
2,432,850	+				-0.3
2,432,855	+				+1.3
2,432,896	-				-0.7
2,432,934	+		CCNA_02282	0.16	-0.1
2,432,934	+		CCNA_02282	0.16	+0.7
2,432,966	+		CCNA_02282	0.23	-0.3
2,433,007	+		CCNA_02282	0.30	+0.5
2,433,062	+		CCNA_02282	0.41	+0.4
2,433,159	-		CCNA_02282	0.60	+0.3
2,433,214	+		CCNA_02282	0.70	+0.1
2,433,254	-		CCNA_02282	0.78	-0.6
2,433,309	-		CCNA_02282	0.88	+0.5
2,433,329	+				-0.8
2,433,379	-				+1.0
2,433,504	+		CCNA_02283	0.19	-1.4
2,433,512	+		CCNA_02283	0.20	+0.9
2,433,520	-		CCNA_02283	0.22	-0.7
2,433,520	-		CCNA_02283	0.22	-1.5
2,433,520	-		CCNA_02283	0.22	-1.6
2,433,548	+		CCNA_02283	0.27	+1.2
2,433,565	+		CCNA_02283	0.30	-0.1
2,433,603	-		CCNA_02283	0.37	-1.0
2,433,651	-		CCNA_02283	0.45	+2.1
2,433,651	-		CCNA_02283	0.45	-0.2
2,433,659	-		CCNA_02283	0.46	-0.2
2,433,662	+		CCNA_02283	0.47	-0.4
2,433,699	+		CCNA_02283	0.54	-3.1
2,433,701	-		CCNA_02283	0.54	-1.0
2,433,707	-		CCNA_02283	0.55	-0.6
2,433,727	+		CCNA_02283	0.59	-2.5
2,433,753	+		CCNA_02283	0.63	-0.5
2,433,761	-		CCNA_02283	0.65	-0.2
2,433,763	+		CCNA_02283	0.65	-1.2
2,433,801	+		CCNA_02283	0.72	-0.5
2,433,811	+		CCNA_02283	0.73	-2.3
2,433,819	-		CCNA_02283	0.75	+0.8
2,433,852	+		CCNA_02283	0.81	+1.3
2,433,852	+		CCNA_02283	0.81	+0.2
2,433,860	-		CCNA_02283	0.82	-0.7
2,433,862	+		CCNA_02283	0.82	-2.5
2,433,930	-				-1.5
2,433,930	-				+0.3
2,433,943	+				-1.1
2,433,952	-				-1.2
2,433,954	+				+0.9
2,433,954	+				-1.6
2,434,004	+				-1.4
2,434,017	-				-0.5
2,434,152	-				-1.3
2,434,166	+				-0.1
2,434,171	+				-0.4
2,434,174	-				-1.4
2,434,174	-				-0.9
2,434,227	-		CCNA_02284	0.16	-0.4
2,434,246	+		CCNA_02284	0.19	-0.8
2,434,246	+		CCNA_02284	0.19	-1.0
2,434,254	-		CCNA_02284	0.20	-0.9
2,434,254	-		CCNA_02284	0.20	-0.5
2,434,270	-		CCNA_02284	0.23	-1.5
2,434,282	-		CCNA_02284	0.25	-0.5
2,434,317	+		CCNA_02284	0.30	-1.4
2,434,322	+		CCNA_02284	0.31	-0.2
2,434,339	+		CCNA_02284	0.34	-0.8
2,434,339	+		CCNA_02284	0.34	-0.6
2,434,375	+		CCNA_02284	0.39	+0.2
2,434,383	-		CCNA_02284	0.40	-1.5
2,434,385	+		CCNA_02284	0.41	+0.1
2,434,455	-		CCNA_02284	0.52	-1.5
2,434,485	-		CCNA_02284	0.56	-1.4
2,434,491	+		CCNA_02284	0.57	+0.9
2,434,562	-		CCNA_02284	0.68	-1.4
2,434,595	+		CCNA_02284	0.74	-1.2
2,434,628	+		CCNA_02284	0.79	+0.3
2,434,642	+		CCNA_02284	0.81	+0.3
2,434,650	-		CCNA_02284	0.82	+0.1
2,434,674	-		CCNA_02284	0.86	-0.2
2,434,704	-				-1.0
2,434,714	-				+1.1
2,434,797	-				+0.1
2,434,807	-				-0.2
2,434,887	+		CCNA_02285	0.15	-1.1
2,434,887	-		CCNA_02285	0.15	+0.7
2,434,907	+		CCNA_02285	0.19	+0.9
2,434,907	+		CCNA_02285	0.19	+0.1
2,434,915	-		CCNA_02285	0.20	-0.4
2,434,917	-		CCNA_02285	0.21	+0.9
2,434,936	+		CCNA_02285	0.25	-1.0
2,434,936	+		CCNA_02285	0.25	-1.2
2,434,944	-		CCNA_02285	0.27	+0.7
2,434,944	-		CCNA_02285	0.27	+0.6
2,434,945	-		CCNA_02285	0.27	+1.0