Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02110

Experiment: PYE with Chloramphenicol 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Chloramphenicol 0.0001 mg/ml
2,259,342	-		CCNA_02109	0.59	-0.0
2,259,350	-		CCNA_02109	0.60	-0.9
2,259,373	+		CCNA_02109	0.61	-1.4
2,259,381	-		CCNA_02109	0.62	-2.2
2,259,406	+		CCNA_02109	0.63	+0.3
2,259,609	+		CCNA_02109	0.74	-0.8
2,259,619	-		CCNA_02109	0.74	-1.3
2,259,848	-		CCNA_02109	0.87	+0.4
2,259,890	-		CCNA_02109	0.89	-0.7
2,260,099	+				+0.2
2,260,099	+				-0.0
2,260,099	+				-0.3
2,260,099	+				+0.8
2,260,106	+				-1.5
2,260,106	+				-0.7
2,260,114	-				+0.3
2,260,114	-				+1.0
2,260,174	+				-1.8
2,260,239	-				+0.9
2,260,258	-				+0.7
2,260,268	-				-0.4
2,260,276	-				+1.0
2,260,295	+				-1.2
2,260,295	+				-0.8
2,260,295	+				-0.2
2,260,295	+				-0.4
2,260,295	+				+0.2
2,260,303	-				+1.7
2,260,303	-				+1.8
2,260,303	-				+2.1
2,260,363	+		CCNA_02110	0.10	-0.2
2,260,373	+		CCNA_02110	0.12	-0.6
2,260,373	+		CCNA_02110	0.12	+0.3
2,260,381	-		CCNA_02110	0.14	-0.3
2,260,396	-		CCNA_02110	0.18	+0.5
2,260,405	-		CCNA_02110	0.20	+0.1
2,260,442	-		CCNA_02110	0.28	+1.5
2,260,442	-		CCNA_02110	0.28	+0.3
2,260,476	-		CCNA_02110	0.36	-0.3
2,260,541	-		CCNA_02110	0.52	-0.8
2,260,643	+		CCNA_02110	0.75	-1.4
2,260,643	+		CCNA_02110	0.75	-0.5
2,260,643	+		CCNA_02110	0.75	-0.2
2,260,643	+		CCNA_02110	0.75	-2.6
2,260,651	-		CCNA_02110	0.77	-0.3
2,260,651	-		CCNA_02110	0.77	-1.0
2,260,679	-		CCNA_02110	0.84	-0.7
2,260,684	-		CCNA_02110	0.85	-3.0
2,260,714	-				-0.8
2,260,751	-				+0.3
2,260,756	-				-0.1
2,260,767	-				+0.1
2,260,773	+				-1.5
2,260,789	+				+0.7
2,260,796	-				-0.9
2,260,841	-		CCNA_02111	0.15	+0.4
2,260,883	-		CCNA_02111	0.22	-0.8
2,260,936	-		CCNA_02111	0.32	-0.1
2,260,948	+		CCNA_02111	0.34	-1.3
2,260,956	-		CCNA_02111	0.35	+1.3
2,260,956	-		CCNA_02111	0.35	-0.2
2,260,970	-		CCNA_02111	0.38	-0.4
2,260,981	+		CCNA_02111	0.40	-0.2
2,261,007	+		CCNA_02111	0.45	-0.8
2,261,025	-		CCNA_02111	0.48	-0.7
2,261,109	-		CCNA_02111	0.63	-0.5
2,261,136	-		CCNA_02111	0.68	-0.3
2,261,162	+		CCNA_02111	0.72	-0.5
2,261,162	+		CCNA_02111	0.72	-0.7
2,261,170	-		CCNA_02111	0.74	-0.5
2,261,170	-		CCNA_02111	0.74	-0.8
2,261,170	-		CCNA_02111	0.74	-0.8
2,261,170	-		CCNA_02111	0.74	-1.8
2,261,177	-		CCNA_02111	0.75	+0.2
2,261,189	+		CCNA_02111	0.77	-2.9
2,261,197	-		CCNA_02111	0.79	-0.3
2,261,208	+		CCNA_02111	0.81	-1.5
2,261,208	+		CCNA_02111	0.81	-0.3
2,261,210	-		CCNA_02111	0.81	-0.2
2,261,244	+		CCNA_02111	0.87	-1.7
2,261,249	+		CCNA_02111	0.88	+0.7
2,261,249	+		CCNA_02111	0.88	-1.3
2,261,257	-		CCNA_02111	0.90	+0.3
2,261,257	-		CCNA_02111	0.90	-1.0
2,261,309	+				-1.4
2,261,334	+				-0.3
2,261,339	+				-1.2
2,261,342	-				-2.2
2,261,342	-				+0.3
2,261,342	-				+0.1
2,261,342	-				-1.3
2,261,352	+				-1.7
2,261,372	-				+0.6
2,261,381	-				-0.0
2,261,427	+				-1.3
2,261,437	+				+0.4
2,261,437	+				-0.6
2,261,437	-				-0.8
2,261,453	+				+0.4
2,261,453	+				-0.0
2,261,463	+				+0.2
2,261,463	+				-0.6
2,261,472	-				-1.3
2,261,479	+				-0.7
2,261,530	-				-1.2
2,261,530	-				-1.2
2,261,535	+				-0.7
2,261,587	-				-1.1
2,261,596	-				-0.3
2,261,596	-				-1.3
2,261,618	+				-0.7
2,261,638	-				-0.2
2,261,653	+		CCNA_02112	0.11	-0.6
2,261,666	-		CCNA_02112	0.13	-0.5
2,261,697	-		CCNA_02112	0.16	-1.3
2,261,712	+		CCNA_02112	0.17	-0.0
2,261,712	+		CCNA_02112	0.17	-2.1
2,261,717	+		CCNA_02112	0.18	+1.8
2,261,720	-		CCNA_02112	0.18	-1.9
2,261,735	-		CCNA_02112	0.20	-0.7
2,261,736	-		CCNA_02112	0.20	-0.6
2,261,744	-		CCNA_02112	0.21	-1.6
2,261,747	+		CCNA_02112	0.21	-0.5