Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c32570

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
3,413,642	+				+0.3
3,413,711	-		PGA1_c32560	0.14	+1.2
3,413,711	-		PGA1_c32560	0.14	+0.1
3,413,711	-		PGA1_c32560	0.14	-2.8
3,413,757	+		PGA1_c32560	0.20	+0.2
3,413,765	-		PGA1_c32560	0.21	-1.4
3,413,795	+		PGA1_c32560	0.24	-0.9
3,413,799	+		PGA1_c32560	0.25	-1.3
3,413,803	-		PGA1_c32560	0.25	-0.7
3,413,806	+		PGA1_c32560	0.25	+1.3
3,413,806	+		PGA1_c32560	0.25	-1.9
3,413,812	-		PGA1_c32560	0.26	+1.3
3,413,814	-		PGA1_c32560	0.26	+1.0
3,413,848	-		PGA1_c32560	0.30	+0.1
3,414,018	-		PGA1_c32560	0.51	+2.0
3,414,094	+		PGA1_c32560	0.60	-1.9
3,414,102	-		PGA1_c32560	0.61	-0.6
3,414,161	-		PGA1_c32560	0.68	-2.1
3,414,161	-		PGA1_c32560	0.68	-1.7
3,414,321	+		PGA1_c32560	0.87	+0.9
3,414,343	+		PGA1_c32560	0.90	+0.7
3,414,352	+				-0.3
3,414,449	+				-1.8
3,414,449	+				+0.9
3,414,449	+				-0.3
3,414,449	+				+0.6
3,414,449	+				-1.7
3,414,457	-				-1.0
3,414,457	-				-0.3
3,414,457	-				-2.7
3,414,457	-				-1.2
3,414,457	-				-0.3
3,414,457	-				-0.0
3,414,457	-				-0.9
3,414,457	-				+2.3
3,414,457	-				-0.6
3,414,457	-				-0.5
3,414,457	-				-0.5
3,414,457	-				-1.3
3,414,476	-				+1.2
3,414,476	-				-1.1
3,414,479	+				-0.0
3,414,487	-				+0.6
3,414,494	-				-0.3
3,414,541	+				+0.4
3,414,565	+				+0.1
3,414,573	-				+2.0
3,414,574	+				+1.5
3,414,621	+				-0.8
3,414,628	-				+1.6
3,414,802	+		PGA1_c32570	0.17	+1.8
3,414,802	+		PGA1_c32570	0.17	-0.6
3,414,802	+		PGA1_c32570	0.17	+1.2
3,414,805	-		PGA1_c32570	0.17	-1.6
3,414,810	-		PGA1_c32570	0.17	-1.1
3,414,810	-		PGA1_c32570	0.17	+1.4
3,414,810	-		PGA1_c32570	0.17	-0.6
3,414,835	+		PGA1_c32570	0.19	+0.6
3,414,869	-		PGA1_c32570	0.22	-0.7
3,414,947	-		PGA1_c32570	0.28	-1.2
3,415,005	-		PGA1_c32570	0.33	-0.3
3,415,053	+		PGA1_c32570	0.36	+1.0
3,415,060	-		PGA1_c32570	0.37	-1.1
3,415,110	-		PGA1_c32570	0.41	-1.0
3,415,146	-		PGA1_c32570	0.44	+0.7
3,415,191	+		PGA1_c32570	0.47	+0.4
3,415,291	+		PGA1_c32570	0.55	+0.1
3,415,291	+		PGA1_c32570	0.55	-1.0
3,415,291	+		PGA1_c32570	0.55	-1.6
3,415,377	+		PGA1_c32570	0.62	+0.6
3,415,385	+		PGA1_c32570	0.62	-0.5
3,415,385	+		PGA1_c32570	0.62	-0.3
3,415,434	-		PGA1_c32570	0.66	-1.2
3,415,440	+		PGA1_c32570	0.66	+1.7
3,415,448	-		PGA1_c32570	0.67	+0.4
3,415,480	+		PGA1_c32570	0.70	-1.4
3,415,480	-		PGA1_c32570	0.70	-2.5
3,415,488	-		PGA1_c32570	0.70	+0.5
3,415,488	-		PGA1_c32570	0.70	-0.5
3,415,518	+		PGA1_c32570	0.73	+1.0
3,415,558	+		PGA1_c32570	0.76	+0.3
3,415,558	+		PGA1_c32570	0.76	-2.4
3,415,558	+		PGA1_c32570	0.76	+0.3
3,415,566	-		PGA1_c32570	0.76	+1.0
3,415,588	+		PGA1_c32570	0.78	-2.5
3,415,590	-		PGA1_c32570	0.78	+0.4
3,415,602	+		PGA1_c32570	0.79	-0.5
3,415,602	+		PGA1_c32570	0.79	+0.8
3,415,610	-		PGA1_c32570	0.80	+1.6
3,415,635	+		PGA1_c32570	0.82	-2.0
3,415,672	+		PGA1_c32570	0.85	+0.1
3,415,715	-		PGA1_c32570	0.88	-0.7
3,415,717	+		PGA1_c32570	0.88	-0.9
3,415,717	+		PGA1_c32570	0.88	+0.1
3,415,725	-		PGA1_c32570	0.89	+0.3
3,415,809	+				+1.3
3,415,814	+				+0.2
3,415,827	-				+0.6
3,415,843	+				-2.0
3,415,844	+				+3.6
3,415,851	-				+0.8
3,415,881	-				-3.2
3,415,881	-				-2.4
3,415,884	+				-1.1
3,415,892	-				+0.1
3,415,894	+				+0.9
3,415,924	-				+0.4
3,415,935	+				-1.0
3,415,935	+				+0.0
3,415,962	-				+0.2
3,416,004	+				+0.8
3,416,004	+				+0.3
3,416,012	-				+1.2
3,416,012	-				+1.2
3,416,049	-				-1.8
3,416,097	-		PGA1_c32580	0.13	+1.7
3,416,105	+		PGA1_c32580	0.13	+1.7
3,416,108	+		PGA1_c32580	0.14	+1.1
3,416,108	-		PGA1_c32580	0.14	+0.1
3,416,113	-		PGA1_c32580	0.14	-1.6
3,416,113	-		PGA1_c32580	0.14	+0.1
3,416,129	-		PGA1_c32580	0.16	-1.8
3,416,192	-		PGA1_c32580	0.21	+1.5
3,416,196	+		PGA1_c32580	0.22	+0.6
3,416,199	+		PGA1_c32580	0.22	-1.4
3,416,208	+		PGA1_c32580	0.23	+1.3
3,416,216	-		PGA1_c32580	0.24	-0.3
3,416,246	+		PGA1_c32580	0.26	+1.3
3,416,266	+		PGA1_c32580	0.28	-1.8
3,416,288	-		PGA1_c32580	0.30	-1.9
3,416,361	+		PGA1_c32580	0.37	-0.8
3,416,485	-		PGA1_c32580	0.49	+0.4
3,416,499	+		PGA1_c32580	0.50	-1.0
3,416,530	+		PGA1_c32580	0.53	+0.0
3,416,538	-		PGA1_c32580	0.54	+0.1
3,416,549	+		PGA1_c32580	0.55	-2.4
3,416,549	+		PGA1_c32580	0.55	-0.5
3,416,549	+		PGA1_c32580	0.55	-2.6
3,416,552	-		PGA1_c32580	0.55	-0.6
3,416,557	-		PGA1_c32580	0.55	-1.6
3,416,557	-		PGA1_c32580	0.55	+0.7
3,416,557	-		PGA1_c32580	0.55	-0.6
3,416,557	-		PGA1_c32580	0.55	+1.0
3,416,579	+		PGA1_c32580	0.57	-0.6
3,416,640	+		PGA1_c32580	0.63	+0.3
3,416,650	+		PGA1_c32580	0.64	+0.6
3,416,751	+		PGA1_c32580	0.73	+1.1
3,416,768	+		PGA1_c32580	0.75	+0.3
3,416,776	-		PGA1_c32580	0.76	+0.1
3,416,797	-		PGA1_c32580	0.78	+1.5
3,416,799	+		PGA1_c32580	0.78	+1.0
3,416,807	-		PGA1_c32580	0.79	-0.6
3,416,812	+		PGA1_c32580	0.79	-2.9
3,416,812	+		PGA1_c32580	0.79	+1.3
3,416,815	-		PGA1_c32580	0.79	+0.4
3,416,820	-		PGA1_c32580	0.80	+1.0
3,416,820	-		PGA1_c32580	0.80	-1.1