Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c31140

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
3,251,442	+		PGA1_c31120	0.16	+0.3
3,251,461	-		PGA1_c31120	0.20	-0.2
3,251,530	+		PGA1_c31120	0.31	-2.1
3,251,530	+		PGA1_c31120	0.31	+0.7
3,251,577	-		PGA1_c31120	0.40	-1.5
3,251,598	-		PGA1_c31120	0.43	-3.8
3,251,626	+		PGA1_c31120	0.48	+0.3
3,251,688	-		PGA1_c31120	0.59	-1.5
3,251,736	+		PGA1_c31120	0.67	-0.3
3,251,737	+		PGA1_c31120	0.67	+0.6
3,251,790	-		PGA1_c31120	0.76	+0.4
3,251,795	+		PGA1_c31120	0.77	-2.7
3,251,828	-		PGA1_c31120	0.83	+0.2
3,251,854	-		PGA1_c31120	0.87	+1.0
3,251,856	+		PGA1_c31120	0.87	-1.2
3,251,886	+				-1.2
3,251,886	+				-2.9
3,251,886	+				+0.1
3,251,894	-				+0.1
3,251,937	-				-2.1
3,251,950	+				+0.8
3,251,961	-				+0.3
3,251,961	-				-1.5
3,251,963	+				-0.2
3,251,987	+				+1.0
3,251,995	-				+0.8
3,252,041	+				+1.9
3,252,041	+				+0.7
3,252,051	+				-1.2
3,252,054	-				-0.5
3,252,059	-				+1.9
3,252,059	-				-0.1
3,252,477	-				+1.4
3,252,477	-				+0.9
3,252,477	-				-2.0
3,252,508	-				-2.6
3,252,510	+				-1.8
3,252,526	-		PGA1_c31140	0.10	-2.5
3,252,547	+		PGA1_c31140	0.13	-2.8
3,252,547	+		PGA1_c31140	0.13	+1.2
3,252,566	-		PGA1_c31140	0.15	+0.8
3,252,580	-		PGA1_c31140	0.17	+0.6
3,252,580	-		PGA1_c31140	0.17	-2.0
3,252,580	-		PGA1_c31140	0.17	-2.5
3,252,605	+		PGA1_c31140	0.19	-0.8
3,252,625	-		PGA1_c31140	0.22	+0.3
3,252,650	+		PGA1_c31140	0.25	-2.1
3,252,650	+		PGA1_c31140	0.25	+0.4
3,252,655	+		PGA1_c31140	0.25	-0.8
3,252,656	-		PGA1_c31140	0.25	-0.9
3,252,671	-		PGA1_c31140	0.27	-2.3
3,252,724	-		PGA1_c31140	0.33	-0.7
3,252,739	-		PGA1_c31140	0.35	-0.2
3,252,751	+		PGA1_c31140	0.36	-0.5
3,252,755	+		PGA1_c31140	0.37	-0.2
3,252,765	+		PGA1_c31140	0.38	-0.6
3,252,821	+		PGA1_c31140	0.44	-0.7
3,252,821	+		PGA1_c31140	0.44	-0.4
3,252,829	-		PGA1_c31140	0.45	+1.5
3,252,829	-		PGA1_c31140	0.45	+0.1
3,252,829	-		PGA1_c31140	0.45	+1.0
3,252,829	-		PGA1_c31140	0.45	-0.2
3,252,832	-		PGA1_c31140	0.45	-0.9
3,252,851	+		PGA1_c31140	0.47	-0.3
3,252,921	-		PGA1_c31140	0.55	-2.3
3,252,939	+		PGA1_c31140	0.57	-0.7
3,252,939	+		PGA1_c31140	0.57	+0.5
3,252,947	-		PGA1_c31140	0.58	-2.6
3,252,947	-		PGA1_c31140	0.58	+0.7
3,252,998	+		PGA1_c31140	0.64	+0.8
3,252,998	+		PGA1_c31140	0.64	-3.1
3,253,006	-		PGA1_c31140	0.65	+0.6
3,253,006	-		PGA1_c31140	0.65	-0.9
3,253,006	-		PGA1_c31140	0.65	-2.9
3,253,006	-		PGA1_c31140	0.65	+1.1
3,253,006	-		PGA1_c31140	0.65	-0.2
3,253,133	-		PGA1_c31140	0.80	+1.1
3,253,155	-		PGA1_c31140	0.82	-0.5
3,253,224	-		PGA1_c31140	0.90	+1.2
3,253,224	-		PGA1_c31140	0.90	-0.1
3,253,226	+				-1.7
3,253,226	+				-1.4
3,253,234	-				+0.3
3,253,234	-				+1.3
3,253,236	-				+0.5
3,253,277	+				+2.1
3,253,279	+				-0.4
3,253,280	+				+1.3
3,253,287	-				-1.0
3,253,326	-				-3.4
3,253,326	-				+1.6
3,253,332	+				+0.0
3,253,350	-				-2.3
3,253,364	+				-1.9
3,253,376	+				-2.0
3,253,376	+				+0.9
3,253,376	+				-2.1
3,253,376	+				+1.6
3,253,377	-				+0.9
3,253,379	-				+0.3
3,253,384	-				+0.7
3,253,384	-				+0.2
3,253,384	-				+0.1
3,253,384	-				+1.2
3,253,412	+				-0.1
3,253,412	+				-2.1
3,253,420	-				-2.5
3,253,458	+		PGA1_c31150	0.14	-2.3
3,253,466	+		PGA1_c31150	0.16	-1.5
3,253,474	-		PGA1_c31150	0.17	+1.1
3,253,509	+		PGA1_c31150	0.23	+1.1
3,253,517	-		PGA1_c31150	0.24	+1.4
3,253,532	-		PGA1_c31150	0.27	-0.1
3,253,589	+		PGA1_c31150	0.37	+1.6
3,253,597	-		PGA1_c31150	0.38	-0.8
3,253,598	-		PGA1_c31150	0.38	+0.7
3,253,622	+		PGA1_c31150	0.42	-1.9
3,253,627	+		PGA1_c31150	0.43	+0.7
3,253,630	-		PGA1_c31150	0.43	-3.0
3,253,630	-		PGA1_c31150	0.43	-2.5
3,253,630	-		PGA1_c31150	0.43	+1.1
3,253,659	+		PGA1_c31150	0.48	-2.3
3,253,687	+		PGA1_c31150	0.53	-1.1
3,253,701	-		PGA1_c31150	0.55	+1.7
3,253,710	-		PGA1_c31150	0.57	+0.2
3,253,744	-		PGA1_c31150	0.63	+0.9
3,253,744	-		PGA1_c31150	0.63	+0.7
3,253,744	-		PGA1_c31150	0.63	-0.5
3,253,761	+		PGA1_c31150	0.66	+1.1
3,253,776	-		PGA1_c31150	0.68	+0.3
3,253,780	+		PGA1_c31150	0.69	-1.1
3,253,785	+		PGA1_c31150	0.70	+0.5
3,253,795	+		PGA1_c31150	0.71	-0.1
3,253,795	+		PGA1_c31150	0.71	+0.4
3,253,795	+		PGA1_c31150	0.71	-2.7
3,253,828	-		PGA1_c31150	0.77	+1.9
3,253,833	-		PGA1_c31150	0.78	-1.2
3,253,840	+		PGA1_c31150	0.79	-0.1
3,253,844	+		PGA1_c31150	0.80	+1.6
3,253,864	+		PGA1_c31150	0.83	-0.7
3,253,872	-		PGA1_c31150	0.84	+1.9
3,253,874	+		PGA1_c31150	0.85	+1.3
3,253,911	+				+0.0
3,253,927	+				-3.0
3,253,956	+				-0.4
3,253,956	+				-0.2
3,253,967	+				-1.4
3,253,967	+				-0.8
3,253,967	+				-1.1
3,253,967	+				-0.9
3,253,972	+				+0.9
3,253,972	+				-1.1
3,253,975	-				+0.4
3,253,975	-				+0.1
3,253,975	-				+0.3
3,253,980	-				-1.1
3,253,980	-				+1.9
3,253,980	-				+0.9
3,253,995	+				-2.5
3,253,995	+				-0.3
3,253,995	+				+0.0
3,253,995	+				-0.7
3,253,995	+				-0.0
3,254,003	-		PGA1_c31160	0.10	+0.1
3,254,003	-		PGA1_c31160	0.10	-0.3
3,254,003	-		PGA1_c31160	0.10	+1.8
3,254,003	-		PGA1_c31160	0.10	+1.0
3,254,061	+		PGA1_c31160	0.25	+0.3
3,254,061	+		PGA1_c31160	0.25	+0.2
3,254,061	+		PGA1_c31160	0.25	+0.1
3,254,061	+		PGA1_c31160	0.25	+0.5
3,254,069	-		PGA1_c31160	0.27	-0.1
3,254,069	-		PGA1_c31160	0.27	-0.1
3,254,069	-		PGA1_c31160	0.27	-0.5
3,254,069	-		PGA1_c31160	0.27	-1.4
3,254,089	-		PGA1_c31160	0.32	+1.0
3,254,170	+		PGA1_c31160	0.52	-1.5
3,254,184	-		PGA1_c31160	0.56	-1.0
3,254,198	-		PGA1_c31160	0.59	+0.9
3,254,203	+		PGA1_c31160	0.61	+0.3
3,254,211	-		PGA1_c31160	0.63	-2.3
3,254,301	-		PGA1_c31160	0.85	+0.1