Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c11290

Experiment: D-Fructose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Fructose (C)
1,166,333	+				-1.0
1,166,354	+				-0.7
1,166,354	+				-1.2
1,166,359	+				-1.4
1,166,364	+				+2.0
1,166,364	+				-1.0
1,166,367	-				+2.7
1,166,372	-				+0.6
1,166,429	-				+0.0
1,166,436	-				-0.5
1,166,436	-				+0.8
1,166,437	+				+0.2
1,166,444	+				+2.0
1,166,552	+		PGA1_c11280	0.21	+0.7
1,166,575	+		PGA1_c11280	0.23	-0.1
1,166,575	+		PGA1_c11280	0.23	-1.4
1,166,575	+		PGA1_c11280	0.23	+0.6
1,166,575	+		PGA1_c11280	0.23	+3.3
1,166,626	+		PGA1_c11280	0.29	+1.6
1,166,638	-		PGA1_c11280	0.31	+1.2
1,166,689	+		PGA1_c11280	0.37	-0.5
1,166,732	+		PGA1_c11280	0.42	+1.1
1,166,740	-		PGA1_c11280	0.42	-1.4
1,166,740	-		PGA1_c11280	0.42	-1.6
1,166,740	-		PGA1_c11280	0.42	+1.1
1,166,749	+		PGA1_c11280	0.44	-1.9
1,166,835	+		PGA1_c11280	0.53	-0.7
1,166,841	-		PGA1_c11280	0.54	+1.0
1,166,849	+		PGA1_c11280	0.55	+0.3
1,166,851	-		PGA1_c11280	0.55	-1.4
1,166,903	-		PGA1_c11280	0.61	-1.4
1,166,931	-		PGA1_c11280	0.65	+1.2
1,166,938	-		PGA1_c11280	0.65	-2.1
1,166,978	+		PGA1_c11280	0.70	+1.1
1,166,995	+		PGA1_c11280	0.72	+3.0
1,167,042	-		PGA1_c11280	0.77	-1.0
1,167,243	-				+0.1
1,167,270	-				+2.8
1,167,270	-				+4.4
1,167,291	-				+0.6
1,167,392	-				+1.9
1,167,418	-				+0.9
1,167,443	+				-0.7
1,167,443	+				+2.8
1,167,460	+				-0.5
1,167,464	+				-0.5
1,167,464	+				+1.5
1,167,473	+				-0.4
1,167,492	-				+2.7
1,167,501	+				-2.1
1,167,508	-		PGA1_c11290	0.10	+1.4
1,167,684	+		PGA1_c11290	0.20	+1.6
1,167,689	+		PGA1_c11290	0.20	+0.3
1,167,695	+		PGA1_c11290	0.21	-1.7
1,167,810	-		PGA1_c11290	0.27	-1.0
1,167,810	-		PGA1_c11290	0.27	+0.9
1,167,810	-		PGA1_c11290	0.27	-2.0
1,167,840	+		PGA1_c11290	0.29	-1.4
1,167,840	+		PGA1_c11290	0.29	-0.7
1,167,840	+		PGA1_c11290	0.29	+2.5
1,167,840	+		PGA1_c11290	0.29	-1.0
1,167,848	-		PGA1_c11290	0.29	-0.6
1,167,848	-		PGA1_c11290	0.29	+0.8
1,167,862	+		PGA1_c11290	0.30	+2.8
1,167,868	+		PGA1_c11290	0.30	+1.9
1,167,907	+		PGA1_c11290	0.33	+0.2
1,167,951	-		PGA1_c11290	0.35	+1.8
1,167,964	-		PGA1_c11290	0.36	+2.2
1,167,968	-		PGA1_c11290	0.36	-1.2
1,167,999	+		PGA1_c11290	0.38	-1.4
1,168,082	+		PGA1_c11290	0.42	-0.4
1,168,089	+		PGA1_c11290	0.43	-1.4
1,168,090	-		PGA1_c11290	0.43	+1.3
1,168,090	-		PGA1_c11290	0.43	+1.2
1,168,094	+		PGA1_c11290	0.43	+1.0
1,168,102	-		PGA1_c11290	0.44	+0.6
1,168,141	+		PGA1_c11290	0.46	-1.3
1,168,247	+		PGA1_c11290	0.52	+1.2
1,168,257	+		PGA1_c11290	0.52	-1.4
1,168,264	-		PGA1_c11290	0.53	-1.8
1,168,271	+		PGA1_c11290	0.53	+0.0
1,168,288	+		PGA1_c11290	0.54	+0.9
1,168,296	-		PGA1_c11290	0.54	-0.7
1,168,319	+		PGA1_c11290	0.56	-0.3
1,168,365	-		PGA1_c11290	0.58	+0.6
1,168,456	-		PGA1_c11290	0.63	+1.7
1,168,514	-		PGA1_c11290	0.67	+0.0
1,168,514	-		PGA1_c11290	0.67	-0.4
1,168,571	+		PGA1_c11290	0.70	-0.8
1,168,636	+		PGA1_c11290	0.73	+1.4
1,168,656	+		PGA1_c11290	0.74	+0.4
1,168,656	+		PGA1_c11290	0.74	+1.9
1,168,656	+		PGA1_c11290	0.74	+1.1
1,168,664	-		PGA1_c11290	0.75	-1.0
1,168,664	-		PGA1_c11290	0.75	-2.2
1,168,664	-		PGA1_c11290	0.75	+1.8
1,168,664	-		PGA1_c11290	0.75	-0.4
1,168,664	-		PGA1_c11290	0.75	+1.1
1,168,664	-		PGA1_c11290	0.75	+1.1
1,168,674	-		PGA1_c11290	0.76	+1.6
1,168,683	+		PGA1_c11290	0.76	-1.0
1,168,688	-		PGA1_c11290	0.76	+0.3
1,168,772	-		PGA1_c11290	0.81	+0.0
1,168,808	+		PGA1_c11290	0.83	+1.9
1,168,877	+		PGA1_c11290	0.87	+2.2
1,168,877	+		PGA1_c11290	0.87	+2.4
1,168,877	+		PGA1_c11290	0.87	-2.7
1,168,877	+		PGA1_c11290	0.87	-0.7
1,168,877	+		PGA1_c11290	0.87	+0.0
1,168,877	+		PGA1_c11290	0.87	+0.5
1,168,877	+		PGA1_c11290	0.87	+2.3
1,168,885	-		PGA1_c11290	0.87	+1.9
1,168,885	-		PGA1_c11290	0.87	+2.6
1,168,885	-		PGA1_c11290	0.87	+0.6
1,168,885	-		PGA1_c11290	0.87	+1.3
1,168,885	-		PGA1_c11290	0.87	-1.6
1,168,895	-		PGA1_c11290	0.88	-1.4
1,168,925	+		PGA1_c11290	0.90	-3.0
1,168,943	+				-2.3
1,168,973	+				+1.6
1,168,984	+				+1.8
1,168,992	-				+0.6
1,168,992	-				+0.8
1,169,000	-				-1.0
1,169,047	-				-2.5
1,169,088	-				+2.4
1,169,107	+				+0.9
1,169,115	-				+1.2
1,169,239	+				+1.6
1,169,239	+				-1.8
1,169,269	-				+1.7
1,169,423	+		PGA1_c11300	0.26	-1.4
1,169,483	-		PGA1_c11300	0.37	+0.5
1,169,500	-		PGA1_c11300	0.40	-2.4
1,169,508	-		PGA1_c11300	0.41	-0.7
1,169,513	+		PGA1_c11300	0.42	-0.4
1,169,559	+		PGA1_c11300	0.50	+0.9
1,169,559	+		PGA1_c11300	0.50	-0.4
1,169,564	+		PGA1_c11300	0.51	+2.0
1,169,567	-		PGA1_c11300	0.52	-0.4
1,169,567	-		PGA1_c11300	0.52	+2.2
1,169,599	-		PGA1_c11300	0.57	-0.4
1,169,673	+		PGA1_c11300	0.71	-1.4
1,169,738	+		PGA1_c11300	0.83	+1.8
1,169,827	-				-1.0
1,169,842	-				-1.0
1,169,842	-				+3.1
1,169,844	+				+0.5
1,169,844	+				-0.4
1,169,852	-				+0.1
1,169,876	+				+0.7
1,169,900	-		PGA1_c11310	0.14	-0.6
1,169,949	+		PGA1_c11310	0.24	+1.1
1,169,990	-		PGA1_c11310	0.32	+2.4
1,170,076	+		PGA1_c11310	0.49	+1.6