Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_743 and HP15_744 are separated by 13 nucleotides HP15_744 and HP15_745 are separated by 17 nucleotides HP15_745 and HP15_746 are separated by 246 nucleotides
HP15_743: HP15_743 - hypothetical protein, at 752,479 to 752,604
_743
HP15_744: HP15_744 - phospholipid/glycerol acyltransferase, at 752,618 to 753,478
_744
HP15_745: HP15_745 - conserved hypothetical protein, at 753,496 to 754,257
_745
HP15_746: HP15_746 - two component transcriptional regulator, winged helix family, at 754,504 to 755,241
_746
Position (kb) 753
754
755 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5
6
7 at 752.499 kb on - strand, within HP15_743 at 752.667 kb on + strand at 752.694 kb on + strand at 752.694 kb on + strand at 752.771 kb on - strand, within HP15_744 at 752.775 kb on - strand, within HP15_744 at 752.821 kb on - strand, within HP15_744 at 752.830 kb on + strand at 752.835 kb on + strand, within HP15_744 at 752.985 kb on + strand, within HP15_744 at 752.993 kb on - strand, within HP15_744 at 753.022 kb on + strand, within HP15_744 at 753.058 kb on - strand, within HP15_744 at 753.100 kb on - strand, within HP15_744 at 753.107 kb on + strand, within HP15_744 at 753.107 kb on + strand, within HP15_744 at 753.110 kb on - strand, within HP15_744 at 753.115 kb on - strand, within HP15_744 at 753.115 kb on - strand, within HP15_744 at 753.219 kb on - strand, within HP15_744 at 753.300 kb on + strand, within HP15_744 at 753.300 kb on + strand, within HP15_744 at 753.347 kb on + strand, within HP15_744 at 753.412 kb on + strand at 753.560 kb on + strand at 753.575 kb on - strand, within HP15_745 at 753.635 kb on + strand, within HP15_745 at 753.635 kb on + strand, within HP15_745 at 753.754 kb on - strand, within HP15_745 at 753.863 kb on - strand, within HP15_745 at 753.863 kb on - strand at 753.934 kb on + strand, within HP15_745 at 754.043 kb on + strand, within HP15_745 at 754.072 kb on + strand, within HP15_745 at 754.175 kb on + strand, within HP15_745 at 754.185 kb on + strand at 754.193 kb on - strand at 754.335 kb on - strand at 754.382 kb on + strand at 754.511 kb on + strand at 754.610 kb on + strand, within HP15_746 at 755.008 kb on + strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.016 kb on - strand, within HP15_746 at 755.124 kb on - strand, within HP15_746 at 755.137 kb on - strand, within HP15_746 at 755.193 kb on + strand at 755.193 kb on + strand at 755.215 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.0002 mg/ml remove 752,499 - HP15_743 0.16 -0.4 752,667 + +0.5 752,694 + +0.8 752,694 + -0.4 752,771 - HP15_744 0.18 +0.4 752,775 - HP15_744 0.18 -1.5 752,821 - HP15_744 0.24 +0.6 752,830 + +0.0 752,835 + HP15_744 0.25 -0.2 752,985 + HP15_744 0.43 -0.5 752,993 - HP15_744 0.44 -3.4 753,022 + HP15_744 0.47 +2.6 753,058 - HP15_744 0.51 +0.4 753,100 - HP15_744 0.56 +0.9 753,107 + HP15_744 0.57 -0.1 753,107 + HP15_744 0.57 +1.1 753,110 - HP15_744 0.57 -1.0 753,115 - HP15_744 0.58 +0.7 753,115 - HP15_744 0.58 -0.0 753,219 - HP15_744 0.70 -0.4 753,300 + HP15_744 0.79 -0.8 753,300 + HP15_744 0.79 +0.4 753,347 + HP15_744 0.85 +0.8 753,412 + +0.7 753,560 + +1.5 753,575 - HP15_745 0.10 -2.8 753,635 + HP15_745 0.18 +0.0 753,635 + HP15_745 0.18 +0.5 753,754 - HP15_745 0.34 +0.5 753,863 - HP15_745 0.48 +2.5 753,863 - -1.5 753,934 + HP15_745 0.57 -2.3 754,043 + HP15_745 0.72 +1.8 754,072 + HP15_745 0.76 -0.0 754,175 + HP15_745 0.89 -1.3 754,185 + +3.4 754,193 - +1.6 754,335 - +1.5 754,382 + +7.3 754,511 + +0.5 754,610 + HP15_746 0.14 -1.3 755,008 + HP15_746 0.68 -1.2 755,016 - HP15_746 0.69 -3.3 755,016 - HP15_746 0.69 +0.0 755,124 - HP15_746 0.84 -1.5 755,137 - HP15_746 0.86 -1.1 755,193 + -3.4 755,193 + -0.7 755,215 + -3.8
Or see this region's nucleotide sequence