Strain Fitness in Marinobacter adhaerens HP15 around HP15_627

Experiment: m.b. Chloramphenicol 0.0002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_624 and HP15_625 overlap by 9 nucleotidesHP15_625 and HP15_626 are separated by 25 nucleotidesHP15_626 and HP15_627 are separated by 107 nucleotidesHP15_627 and HP15_628 are separated by 20 nucleotidesHP15_628 and HP15_629 are separated by 225 nucleotides HP15_624: HP15_624 - hypothetical protein, at 649,480 to 649,635 _624 HP15_625: HP15_625 - ribosomal protein S6, at 649,627 to 650,019 _625 HP15_626: HP15_626 - ribosomal protein S18, at 650,045 to 650,275 _626 HP15_627: HP15_627 - conserved hypothetical protein, membrane, at 650,383 to 651,168 _627 HP15_628: HP15_628 - 50S ribosomal protein L9, at 651,189 to 651,635 _628 HP15_629: HP15_629 - DNA helicase, DnaB type, at 651,861 to 653,273 _629 Position (kb) 650 651 652Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 650.345 kb on - strandat 650.534 kb on - strand, within HP15_627at 650.561 kb on - strand, within HP15_627at 651.005 kb on - strand, within HP15_627at 651.171 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Chloramphenicol 0.0002 mg/ml
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650,345 - +0.1
650,534 - HP15_627 0.19 -1.5
650,561 - HP15_627 0.23 -1.6
651,005 - HP15_627 0.79 -3.8
651,171 - -0.8

Or see this region's nucleotide sequence