Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c34370

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
3,602,105	-		PGA1_c34360	0.16	+1.0
3,602,138	-		PGA1_c34360	0.19	-1.7
3,602,172	-		PGA1_c34360	0.22	-2.7
3,602,173	+		PGA1_c34360	0.22	-2.5
3,602,204	-		PGA1_c34360	0.24	+0.2
3,602,238	-		PGA1_c34360	0.27	+1.7
3,602,269	-		PGA1_c34360	0.30	+1.7
3,602,310	+		PGA1_c34360	0.33	-1.6
3,602,310	+		PGA1_c34360	0.33	-1.3
3,602,310	+		PGA1_c34360	0.33	-0.8
3,602,310	+		PGA1_c34360	0.33	-2.6
3,602,310	+		PGA1_c34360	0.33	+1.1
3,602,310	+		PGA1_c34360	0.33	-3.4
3,602,318	-		PGA1_c34360	0.34	-1.7
3,602,318	-		PGA1_c34360	0.34	-1.1
3,602,318	-		PGA1_c34360	0.34	-3.1
3,602,318	-		PGA1_c34360	0.34	+1.3
3,602,318	-		PGA1_c34360	0.34	+1.1
3,602,385	+		PGA1_c34360	0.40	-1.9
3,602,453	+		PGA1_c34360	0.46	-1.1
3,602,495	+		PGA1_c34360	0.49	-3.4
3,602,526	+		PGA1_c34360	0.52	+0.6
3,602,636	+		PGA1_c34360	0.61	-0.7
3,602,696	-		PGA1_c34360	0.66	-1.6
3,602,696	-		PGA1_c34360	0.66	-0.6
3,602,732	-		PGA1_c34360	0.69	-2.3
3,602,790	-		PGA1_c34360	0.74	+0.3
3,602,810	+		PGA1_c34360	0.76	+0.2
3,602,832	+		PGA1_c34360	0.78	-0.6
3,602,839	+		PGA1_c34360	0.78	-0.6
3,602,847	-		PGA1_c34360	0.79	+2.8
3,602,882	-		PGA1_c34360	0.82	-1.0
3,602,960	-		PGA1_c34360	0.89	-1.3
3,602,975	-				-1.0
3,602,992	-				+0.5
3,602,992	-				-0.9
3,602,999	-				-3.3
3,602,999	-				-0.6
3,603,024	+				+2.3
3,603,026	-				+0.7
3,603,050	+				+0.0
3,603,149	-				+2.4
3,603,149	-				+0.4
3,603,149	-				+0.3
3,603,169	+				-1.3
3,603,169	+				-0.3
3,603,204	-				+1.3
3,603,204	-				+0.8
3,603,206	-				-2.2
3,603,269	-		PGA1_c34370	0.13	-0.7
3,603,285	-		PGA1_c34370	0.15	-1.9
3,603,362	+		PGA1_c34370	0.21	+1.2
3,603,370	-		PGA1_c34370	0.21	-1.3
3,603,378	-		PGA1_c34370	0.22	-2.3
3,603,392	+		PGA1_c34370	0.23	-2.1
3,603,400	-		PGA1_c34370	0.24	+0.5
3,603,417	-		PGA1_c34370	0.25	+2.8
3,603,418	+		PGA1_c34370	0.25	-1.4
3,603,418	+		PGA1_c34370	0.25	-3.3
3,603,418	+		PGA1_c34370	0.25	-3.2
3,603,426	-		PGA1_c34370	0.26	+0.6
3,603,426	-		PGA1_c34370	0.26	+0.3
3,603,426	-		PGA1_c34370	0.26	-0.7
3,603,426	-		PGA1_c34370	0.26	+1.3
3,603,446	-		PGA1_c34370	0.27	-0.2
3,603,446	-		PGA1_c34370	0.27	-0.6
3,603,446	-		PGA1_c34370	0.27	+0.7
3,603,469	+		PGA1_c34370	0.29	-3.2
3,603,470	+		PGA1_c34370	0.29	-0.5
3,603,477	-		PGA1_c34370	0.30	-0.5
3,603,484	-		PGA1_c34370	0.30	-0.7
3,603,541	+		PGA1_c34370	0.35	+0.6
3,603,541	+		PGA1_c34370	0.35	-1.3
3,603,592	-		PGA1_c34370	0.39	+1.1
3,603,605	+		PGA1_c34370	0.40	-1.5
3,603,632	-		PGA1_c34370	0.42	-1.3
3,603,640	+		PGA1_c34370	0.43	+1.1
3,603,658	+		PGA1_c34370	0.44	+0.7
3,603,707	+		PGA1_c34370	0.48	-1.9
3,603,707	+		PGA1_c34370	0.48	-1.3
3,603,707	+		PGA1_c34370	0.48	-2.7
3,603,707	+		PGA1_c34370	0.48	-3.0
3,603,707	+		PGA1_c34370	0.48	+0.1
3,603,710	-		PGA1_c34370	0.48	+2.2
3,603,712	+		PGA1_c34370	0.48	+1.3
3,603,712	+		PGA1_c34370	0.48	-0.7
3,603,712	+		PGA1_c34370	0.48	+0.8
3,603,715	-		PGA1_c34370	0.49	+0.2
3,603,720	-		PGA1_c34370	0.49	+0.1
3,603,771	+		PGA1_c34370	0.53	-1.9
3,603,771	+		PGA1_c34370	0.53	-1.2
3,603,771	+		PGA1_c34370	0.53	-0.7
3,603,779	-		PGA1_c34370	0.54	-1.7
3,603,799	+		PGA1_c34370	0.55	+2.1
3,603,799	+		PGA1_c34370	0.55	+0.3
3,603,808	+		PGA1_c34370	0.56	+0.9
3,603,849	+		PGA1_c34370	0.59	-2.4
3,603,862	-		PGA1_c34370	0.60	-2.2
3,603,862	-		PGA1_c34370	0.60	+2.1
3,603,872	+		PGA1_c34370	0.61	-1.9
3,603,872	+		PGA1_c34370	0.61	+0.3
3,603,880	-		PGA1_c34370	0.61	-1.2
3,603,911	-		PGA1_c34370	0.64	+2.0
3,603,948	+		PGA1_c34370	0.67	-3.2
3,603,965	+		PGA1_c34370	0.68	+0.5
3,603,966	+		PGA1_c34370	0.68	-1.3
3,603,987	-		PGA1_c34370	0.70	-2.4
3,604,022	+		PGA1_c34370	0.73	-1.3
3,604,022	+		PGA1_c34370	0.73	-1.5
3,604,022	+		PGA1_c34370	0.73	+0.3
3,604,030	-		PGA1_c34370	0.73	+0.2
3,604,030	-		PGA1_c34370	0.73	-0.5
3,604,076	-		PGA1_c34370	0.77	-2.4
3,604,155	+		PGA1_c34370	0.83	+0.6
3,604,155	+		PGA1_c34370	0.83	-0.4
3,604,155	+		PGA1_c34370	0.83	+1.1
3,604,155	+		PGA1_c34370	0.83	-1.3
3,604,155	+		PGA1_c34370	0.83	+0.3
3,604,163	-		PGA1_c34370	0.84	-0.2
3,604,163	-		PGA1_c34370	0.84	+0.7
3,604,163	-		PGA1_c34370	0.84	+0.4
3,604,165	+		PGA1_c34370	0.84	+1.7
3,604,165	+		PGA1_c34370	0.84	-1.3
3,604,165	+		PGA1_c34370	0.84	-1.5
3,604,173	-		PGA1_c34370	0.85	-2.5
3,604,173	-		PGA1_c34370	0.85	+1.1
3,604,181	-		PGA1_c34370	0.85	+1.0
3,604,207	-		PGA1_c34370	0.87	-2.0
3,604,260	+				-1.0
3,604,268	-				+0.5
3,604,304	-				-3.1
3,604,304	-				+0.7
3,604,304	-				+0.7
3,604,344	+				-1.5
3,604,400	+				+1.9
3,604,439	-				-0.2
3,604,552	-				+0.4
3,604,649	+		PGA1_c34380	0.16	-0.9
3,604,649	+		PGA1_c34380	0.16	+1.1
3,604,713	+		PGA1_c34380	0.22	-2.1
3,604,721	+		PGA1_c34380	0.23	-1.3
3,604,772	+		PGA1_c34380	0.27	+0.0
3,604,772	+		PGA1_c34380	0.27	-0.2
3,604,780	-		PGA1_c34380	0.28	+0.5
3,604,780	-		PGA1_c34380	0.28	-0.3
3,604,780	-		PGA1_c34380	0.28	+1.3
3,604,817	+		PGA1_c34380	0.31	-2.9
3,604,959	+		PGA1_c34380	0.44	-0.2
3,604,970	+		PGA1_c34380	0.45	+1.4
3,604,973	-		PGA1_c34380	0.45	+0.7
3,604,992	+		PGA1_c34380	0.47	-1.4
3,604,992	+		PGA1_c34380	0.47	+1.4
3,605,016	+		PGA1_c34380	0.49	-0.1
3,605,019	+		PGA1_c34380	0.50	-1.9
3,605,050	+		PGA1_c34380	0.52	-1.1
3,605,052	+		PGA1_c34380	0.53	+0.9
3,605,078	+		PGA1_c34380	0.55	+2.1
3,605,088	+		PGA1_c34380	0.56	+0.8
3,605,088	+		PGA1_c34380	0.56	+1.1
3,605,096	-		PGA1_c34380	0.57	+1.8
3,605,119	+		PGA1_c34380	0.59	-2.9
3,605,127	-		PGA1_c34380	0.59	+0.1
3,605,182	-		PGA1_c34380	0.64	-2.0
3,605,182	-		PGA1_c34380	0.64	-0.7
3,605,271	+		PGA1_c34380	0.72	-1.0
3,605,282	+		PGA1_c34380	0.73	-0.0
3,605,324	+		PGA1_c34380	0.77	+0.3
3,605,332	-		PGA1_c34380	0.78	-0.5