Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c22720

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
2,353,347	+		PGA1_c22710	0.34	-0.3
2,353,347	+		PGA1_c22710	0.34	-2.2
2,353,352	+		PGA1_c22710	0.34	-1.5
2,353,352	+		PGA1_c22710	0.34	-3.2
2,353,355	-		PGA1_c22710	0.34	-0.8
2,353,360	-		PGA1_c22710	0.35	+1.1
2,353,364	+		PGA1_c22710	0.35	-1.4
2,353,386	-		PGA1_c22710	0.37	+1.6
2,353,451	-		PGA1_c22710	0.42	-2.2
2,353,484	+		PGA1_c22710	0.45	-1.2
2,353,515	-		PGA1_c22710	0.48	-2.7
2,353,515	-		PGA1_c22710	0.48	-1.5
2,353,541	+		PGA1_c22710	0.50	+0.8
2,353,547	+		PGA1_c22710	0.51	-0.5
2,353,549	-		PGA1_c22710	0.51	-0.7
2,353,567	-		PGA1_c22710	0.52	+0.4
2,353,567	-		PGA1_c22710	0.52	+1.0
2,353,567	-		PGA1_c22710	0.52	-0.5
2,353,670	+		PGA1_c22710	0.61	-0.6
2,353,670	+		PGA1_c22710	0.61	+2.2
2,353,693	+		PGA1_c22710	0.63	+0.7
2,353,771	+		PGA1_c22710	0.70	+1.7
2,353,771	+		PGA1_c22710	0.70	-1.3
2,353,784	-		PGA1_c22710	0.71	-2.9
2,353,799	+		PGA1_c22710	0.72	-2.5
2,353,839	-		PGA1_c22710	0.75	-2.8
2,353,860	+		PGA1_c22710	0.77	-2.8
2,353,860	-		PGA1_c22710	0.77	-2.9
2,353,889	+		PGA1_c22710	0.80	-0.3
2,353,928	-		PGA1_c22710	0.83	+1.0
2,353,954	-		PGA1_c22710	0.85	+0.8
2,353,959	-		PGA1_c22710	0.86	+1.1
2,353,996	-		PGA1_c22710	0.89	-0.1
2,354,036	-				+0.0
2,354,097	+				+0.2
2,354,097	+				+0.3
2,354,097	+				+0.5
2,354,102	+				-0.0
2,354,124	+				-1.1
2,354,143	-				+0.5
2,354,172	+				+2.1
2,354,256	+				-2.3
2,354,354	-				+0.4
2,354,368	+				-1.6
2,354,481	+		PGA1_c22720	0.15	-1.7
2,354,504	-		PGA1_c22720	0.18	-1.6
2,354,533	-		PGA1_c22720	0.21	-2.8
2,354,554	-		PGA1_c22720	0.23	-1.3
2,354,567	+		PGA1_c22720	0.24	-0.7
2,354,579	-		PGA1_c22720	0.25	-0.1
2,354,585	-		PGA1_c22720	0.26	-1.0
2,354,648	-		PGA1_c22720	0.32	-1.5
2,354,699	+		PGA1_c22720	0.37	-0.9
2,354,702	-		PGA1_c22720	0.37	-0.9
2,354,710	+		PGA1_c22720	0.38	+0.5
2,354,718	-		PGA1_c22720	0.39	+0.9
2,354,718	-		PGA1_c22720	0.39	-0.7
2,354,718	-		PGA1_c22720	0.39	+0.6
2,354,720	+		PGA1_c22720	0.39	-3.5
2,354,730	-		PGA1_c22720	0.40	+1.9
2,354,744	-		PGA1_c22720	0.41	-0.5
2,354,761	-		PGA1_c22720	0.43	-2.3
2,354,803	-		PGA1_c22720	0.47	-2.2
2,354,811	+		PGA1_c22720	0.48	+1.7
2,354,840	+		PGA1_c22720	0.51	+1.3
2,354,840	+		PGA1_c22720	0.51	+1.4
2,354,853	+		PGA1_c22720	0.52	+1.3
2,354,853	+		PGA1_c22720	0.52	-0.3
2,354,853	+		PGA1_c22720	0.52	-0.8
2,354,853	+		PGA1_c22720	0.52	-3.0
2,354,861	-		PGA1_c22720	0.53	-2.3
2,354,862	+		PGA1_c22720	0.53	+1.5
2,354,870	-		PGA1_c22720	0.54	+1.1
2,354,873	+		PGA1_c22720	0.54	-3.6
2,354,918	-		PGA1_c22720	0.58	-0.4
2,354,925	-		PGA1_c22720	0.59	+0.5
2,354,943	+		PGA1_c22720	0.61	-1.1
2,354,943	+		PGA1_c22720	0.61	-0.5
2,354,943	+		PGA1_c22720	0.61	+1.2
2,354,955	+		PGA1_c22720	0.62	-2.3
2,354,955	+		PGA1_c22720	0.62	+1.1
2,354,955	+		PGA1_c22720	0.62	-0.5
2,354,995	-		PGA1_c22720	0.66	+1.5
2,355,079	+		PGA1_c22720	0.74	-2.6
2,355,087	-		PGA1_c22720	0.75	-1.1
2,355,087	-		PGA1_c22720	0.75	+0.4
2,355,087	-		PGA1_c22720	0.75	-0.6
2,355,112	-		PGA1_c22720	0.77	-1.3
2,355,112	-		PGA1_c22720	0.77	-0.2
2,355,144	-		PGA1_c22720	0.80	-2.0
2,355,146	+		PGA1_c22720	0.81	+0.6
2,355,252	+				-1.5
2,355,337	+				-0.4
2,355,345	+				-2.7
2,355,347	+				-0.3
2,355,353	-				+1.4
2,355,355	+				-2.2
2,355,355	-				+0.5
2,355,355	-				-2.0
2,355,395	-				-1.0
2,355,486	-				+1.5
2,355,488	+				+0.6
2,355,488	+				-1.8
2,355,496	-				+0.1
2,355,496	-				-1.7
2,355,498	+				-2.8
2,355,518	+				-0.5
2,355,536	+				+1.0
2,355,579	-				-0.0
2,355,581	+				-0.2
2,355,589	-				+0.9
2,355,595	-		PGA1_c22730	0.10	+0.1
2,355,595	-		PGA1_c22730	0.10	-0.7
2,355,598	+		PGA1_c22730	0.11	-1.5
2,355,598	+		PGA1_c22730	0.11	+1.4
2,355,598	+		PGA1_c22730	0.11	-0.9
2,355,606	-		PGA1_c22730	0.11	-0.9
2,355,606	-		PGA1_c22730	0.11	-1.9
2,355,606	-		PGA1_c22730	0.11	-0.7
2,355,606	-		PGA1_c22730	0.11	-3.0
2,355,606	-		PGA1_c22730	0.11	-0.6
2,355,628	+		PGA1_c22730	0.13	-2.5
2,355,665	+		PGA1_c22730	0.16	+0.7
2,355,683	-		PGA1_c22730	0.18	-1.0
2,355,683	-		PGA1_c22730	0.18	-1.8
2,355,690	+		PGA1_c22730	0.18	+0.1
2,355,704	-		PGA1_c22730	0.20	+1.8
2,355,708	-		PGA1_c22730	0.20	+1.7
2,355,710	+		PGA1_c22730	0.20	-2.9
2,355,742	+		PGA1_c22730	0.23	-1.2
2,355,771	+		PGA1_c22730	0.25	+1.0
2,355,779	-		PGA1_c22730	0.26	+1.1
2,355,781	+		PGA1_c22730	0.26	-0.3
2,355,781	+		PGA1_c22730	0.26	-0.1
2,355,789	+		PGA1_c22730	0.27	-1.5
2,355,789	-		PGA1_c22730	0.27	+0.5
2,355,789	-		PGA1_c22730	0.27	+1.8
2,355,789	-		PGA1_c22730	0.27	+0.5
2,355,791	+		PGA1_c22730	0.27	+1.5
2,355,791	+		PGA1_c22730	0.27	+0.6
2,355,794	-		PGA1_c22730	0.27	+1.6
2,355,839	+		PGA1_c22730	0.31	+0.9
2,355,893	-		PGA1_c22730	0.36	+0.0
2,356,016	+		PGA1_c22730	0.46	+1.7
2,356,079	-		PGA1_c22730	0.51	-2.3
2,356,079	-		PGA1_c22730	0.51	-0.7
2,356,079	-		PGA1_c22730	0.51	+1.0
2,356,119	+		PGA1_c22730	0.55	-1.9
2,356,148	+		PGA1_c22730	0.57	+0.4
2,356,171	+		PGA1_c22730	0.59	-0.3
2,356,177	-		PGA1_c22730	0.60	-2.5
2,356,179	-		PGA1_c22730	0.60	+1.7
2,356,211	+		PGA1_c22730	0.62	+1.6
2,356,326	+		PGA1_c22730	0.72	-3.3
2,356,326	+		PGA1_c22730	0.72	+0.7