Strain Fitness in Marinobacter adhaerens HP15 around HP15_1250
Experiment: m.b. Chloramphenicol 0.0002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | m.b. Chloramphenicol 0.0002 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,310,131 | - | +0.3 | |||
| 1,310,163 | + | -2.5 | |||
| 1,310,163 | + | -1.5 | |||
| 1,310,171 | - | HP15_1250 | 0.11 | -0.5 | |
| 1,310,171 | - | HP15_1250 | 0.11 | +0.5 | |
| 1,310,171 | - | HP15_1250 | 0.11 | -0.8 | |
| 1,310,171 | - | HP15_1250 | 0.11 | -0.3 | |
| 1,310,205 | - | HP15_1250 | 0.18 | -3.6 | |
| 1,310,261 | + | HP15_1250 | 0.29 | -0.4 | |
| 1,310,367 | - | HP15_1250 | 0.50 | -1.5 | |
| 1,310,368 | - | HP15_1250 | 0.50 | -0.5 | |
| 1,310,472 | - | HP15_1250 | 0.70 | -1.4 | |
| 1,310,573 | - | +0.3 | |||
| 1,310,573 | - | -1.0 | |||
| 1,310,601 | - | -0.5 | |||
| 1,310,952 | + | HP15_1251 | 0.13 | -0.7 | |
| 1,310,959 | - | HP15_1251 | 0.14 | -1.2 | |
| 1,310,978 | + | HP15_1251 | 0.15 | -1.4 | |
| 1,311,087 | - | HP15_1251 | 0.21 | -1.3 | |
| 1,311,101 | + | HP15_1251 | 0.22 | -0.5 | |
| 1,311,115 | + | HP15_1251 | 0.22 | +0.0 | |
| 1,311,217 | + | HP15_1251 | 0.28 | +0.0 |
Or see this region's nucleotide sequence