Strain Fitness in Shewanella amazonensis SB2B around Sama_3073

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
3,650,455	-		Sama_3072	0.37	-0.9
3,650,455	-		Sama_3072	0.37	-0.1
3,650,458	+		Sama_3072	0.38	+1.2
3,650,500	-		Sama_3072	0.42	-0.3
3,650,500	-		Sama_3072	0.42	-0.5
3,650,521	+		Sama_3072	0.43	+0.4
3,650,521	+		Sama_3072	0.43	-1.7
3,650,522	-		Sama_3072	0.44	-1.0
3,650,522	-		Sama_3072	0.44	+1.0
3,650,522	-		Sama_3072	0.44	-0.9
3,650,522	-		Sama_3072	0.44	-1.4
3,650,533	-		Sama_3072	0.45	-0.9
3,650,533	-		Sama_3072	0.45	-0.4
3,650,585	+		Sama_3072	0.49	+0.3
3,650,585	+		Sama_3072	0.49	-0.5
3,650,585	+		Sama_3072	0.49	-2.2
3,650,586	-		Sama_3072	0.49	-1.2
3,650,586	-		Sama_3072	0.49	-3.2
3,650,586	-		Sama_3072	0.49	-2.3
3,650,664	-		Sama_3072	0.56	+1.4
3,650,666	+		Sama_3072	0.56	+0.6
3,650,666	+		Sama_3072	0.56	+0.3
3,650,666	+		Sama_3072	0.56	-0.7
3,650,666	+		Sama_3072	0.56	-0.1
3,650,666	+		Sama_3072	0.56	-0.6
3,650,666	+		Sama_3072	0.56	-2.9
3,650,666	+		Sama_3072	0.56	-2.1
3,650,722	+		Sama_3072	0.62	-1.2
3,650,793	-		Sama_3072	0.68	+0.1
3,650,793	-		Sama_3072	0.68	-1.4
3,650,793	-		Sama_3072	0.68	-1.1
3,650,845	+		Sama_3072	0.73	-1.4
3,650,845	+		Sama_3072	0.73	-1.3
3,650,845	+		Sama_3072	0.73	-0.9
3,650,846	-		Sama_3072	0.73	-0.4
3,650,846	-		Sama_3072	0.73	-0.3
3,650,846	-		Sama_3072	0.73	-0.3
3,650,846	-		Sama_3072	0.73	+4.3
3,650,846	-		Sama_3072	0.73	+0.2
3,650,846	-		Sama_3072	0.73	-0.9
3,650,846	-		Sama_3072	0.73	-1.5
3,650,895	+		Sama_3072	0.77	-0.7
3,650,896	-		Sama_3072	0.77	-1.4
3,650,896	-		Sama_3072	0.77	-0.4
3,650,896	-		Sama_3072	0.77	-1.5
3,650,896	-		Sama_3072	0.77	+0.3
3,650,913	+		Sama_3072	0.79	-1.1
3,650,914	-		Sama_3072	0.79	+0.8
3,650,920	+		Sama_3072	0.79	-1.1
3,650,920	+		Sama_3072	0.79	-0.4
3,650,920	+		Sama_3072	0.79	-0.5
3,650,946	+		Sama_3072	0.82	-0.3
3,650,946	+		Sama_3072	0.82	-1.7
3,650,947	-		Sama_3072	0.82	-1.2
3,650,947	-		Sama_3072	0.82	+0.3
3,650,947	-		Sama_3072	0.82	-0.1
3,650,947	-		Sama_3072	0.82	-1.9
3,650,947	-		Sama_3072	0.82	-0.1
3,650,986	+		Sama_3072	0.85	-0.4
3,650,987	-		Sama_3072	0.85	-0.6
3,650,987	-		Sama_3072	0.85	-0.9
3,651,031	+		Sama_3072	0.89	-0.8
3,651,032	-		Sama_3072	0.89	+0.2
3,651,042	+				-0.7
3,651,104	+				-0.8
3,651,105	-				+0.0
3,651,120	+				-2.1
3,651,120	+				+0.7
3,651,120	+				+0.6
3,651,120	+				+1.2
3,651,120	+				+0.3
3,651,156	-				-1.3
3,651,156	-				+0.7
3,651,171	+				-1.5
3,651,171	+				+1.3
3,651,171	+				-0.8
3,651,171	+				+0.7
3,651,171	+				-2.1
3,651,171	+				-0.1
3,651,171	+				-0.8
3,651,171	+				+1.0
3,651,171	+				-1.2
3,651,171	+				-1.8
3,651,171	+				-0.8
3,651,171	+				-2.8
3,651,171	+				+0.7
3,651,171	+				+0.8
3,651,171	+				+0.5
3,651,171	+				-3.1
3,651,171	+				-0.3
3,651,171	+				-2.0
3,651,171	+				-2.2
3,651,171	+				-2.3
3,651,171	+				+0.2
3,651,171	+				+0.4
3,651,171	+				-2.2
3,651,171	+				-0.4
3,651,172	-				+0.9
3,651,172	-				+1.2
3,651,172	-				-0.6
3,651,172	-				+1.9
3,651,172	-				+1.3
3,651,172	-				+2.6
3,651,172	-				+1.3
3,651,172	-				+0.1
3,651,172	-				-0.2
3,651,172	-				+0.7
3,651,172	-				+1.3
3,651,172	-				+1.8
3,651,172	-				+1.1
3,651,172	-				+1.4
3,651,172	-				-1.0
3,651,172	-				-0.8
3,651,172	-				+2.5
3,651,172	-				-0.2
3,651,172	-				+1.0
3,651,173	+				-0.5
3,651,173	+				-0.5
3,651,173	+				-0.5
3,651,173	+				-1.1
3,651,173	+				-2.5
3,651,173	+				+0.2
3,651,173	+				-2.0
3,651,173	+				-0.8
3,651,173	+				+0.6
3,651,174	-				-0.1
3,651,174	-				+1.7
3,651,174	-				+1.2
3,651,174	-				+0.8
3,651,174	-				+0.8
3,651,174	-				+1.0
3,651,174	-				+0.6
3,651,174	-				+0.4
3,651,192	+				-2.4
3,651,192	+				-1.3
3,651,192	+				-0.2
3,651,192	+				-0.8
3,651,192	+				-1.0
3,651,192	+				-1.1
3,651,193	-				-0.1
3,651,193	-				-0.1
3,651,214	+				+0.1
3,651,214	+				+0.1
3,651,214	+				-0.7
3,651,214	+				+0.5
3,651,214	+				-1.3
3,651,214	+				+0.5
3,651,215	-				+2.1
3,651,215	-				+0.4
3,651,215	-				-1.5
3,651,227	-				+0.8
3,651,248	+				-0.3
3,651,248	+				-0.3
3,651,249	-				+1.9
3,651,277	+				+3.7
3,651,277	+				-0.0
3,651,277	+				+0.3
3,651,334	+				-1.0
3,651,334	+				+0.1
3,651,334	+				-0.6
3,651,334	+				-1.0
3,651,334	+				-1.3
3,651,334	+				+2.0
3,651,334	+				-0.3
3,651,596	+		Sama_3073	0.15	-0.3
3,651,697	+		Sama_3073	0.23	+0.6
3,651,697	+		Sama_3073	0.23	-2.3
3,651,697	+		Sama_3073	0.23	-1.3
3,651,699	+		Sama_3073	0.23	-0.0
3,651,699	+		Sama_3073	0.23	-0.0
3,651,699	+		Sama_3073	0.23	-0.3
3,651,699	+		Sama_3073	0.23	-1.0
3,651,699	+		Sama_3073	0.23	-1.3
3,651,700	-		Sama_3073	0.23	-1.8
3,651,701	+		Sama_3073	0.23	-0.3
3,651,741	-		Sama_3073	0.26	-0.0
3,651,741	-		Sama_3073	0.26	-0.9
3,651,899	+		Sama_3073	0.38	-1.2
3,652,112	+		Sama_3073	0.53	-0.2
3,652,221	+		Sama_3073	0.61	+1.0
3,652,221	+		Sama_3073	0.61	-1.7
3,652,221	+		Sama_3073	0.61	+0.4
3,652,562	+		Sama_3073	0.87	-1.5
3,652,609	-				-0.0
3,652,738	+				-0.6
3,652,738	+				-0.6
3,652,757	+				+1.2
3,652,757	+				+1.1
3,652,780	+				-0.8
3,652,780	+				-0.6
3,652,799	-				-0.8
3,652,803	+				+0.6
3,652,803	+				-0.0
3,652,804	-				-2.5
3,652,849	+				-3.7
3,652,858	+				-1.3
3,652,917	+				-2.4
3,652,917	+				-0.7
3,652,917	+				-2.3
3,652,918	-				-2.3
3,653,023	+		Sama_3074	0.17	-0.7
3,653,023	+		Sama_3074	0.17	-0.0
3,653,023	+		Sama_3074	0.17	-1.6
3,653,023	+		Sama_3074	0.17	+0.4
3,653,023	+		Sama_3074	0.17	-0.4
3,653,023	+		Sama_3074	0.17	-1.6
3,653,024	-		Sama_3074	0.18	-1.9
3,653,024	-		Sama_3074	0.18	-1.6
3,653,025	+		Sama_3074	0.18	+0.4
3,653,025	+		Sama_3074	0.18	-0.0
3,653,025	+		Sama_3074	0.18	-2.1
3,653,026	-		Sama_3074	0.18	+1.4
3,653,026	-		Sama_3074	0.18	-0.8
3,653,026	-		Sama_3074	0.18	-1.3
3,653,026	-		Sama_3074	0.18	-0.5
3,653,038	+		Sama_3074	0.19	-1.9
3,653,038	+		Sama_3074	0.19	-1.5
3,653,038	+		Sama_3074	0.19	-2.7
3,653,038	+		Sama_3074	0.19	-2.5
3,653,038	+		Sama_3074	0.19	-1.6
3,653,038	+		Sama_3074	0.19	-1.5
3,653,039	-		Sama_3074	0.19	-1.7
3,653,116	+		Sama_3074	0.26	-1.6
3,653,116	+		Sama_3074	0.26	+0.6
3,653,116	+		Sama_3074	0.26	-1.0
3,653,117	-		Sama_3074	0.26	-2.1
3,653,117	-		Sama_3074	0.26	-1.2
3,653,117	-		Sama_3074	0.26	-2.8
3,653,117	-		Sama_3074	0.26	-1.5
3,653,117	-		Sama_3074	0.26	-1.3
3,653,127	+		Sama_3074	0.27	-1.3
3,653,128	-		Sama_3074	0.27	-1.6
3,653,128	-		Sama_3074	0.27	-0.3
3,653,230	+		Sama_3074	0.37	-2.8
3,653,249	+		Sama_3074	0.39	-1.4
3,653,249	+		Sama_3074	0.39	-0.0
3,653,250	-		Sama_3074	0.39	-2.5
3,653,270	+		Sama_3074	0.41	-3.4
3,653,271	-		Sama_3074	0.41	-3.1
3,653,293	+		Sama_3074	0.43	-1.7
3,653,294	-		Sama_3074	0.43	-1.0
3,653,325	+		Sama_3074	0.46	-2.0
3,653,327	+		Sama_3074	0.46	-1.0
3,653,327	+		Sama_3074	0.46	-2.1
3,653,357	+		Sama_3074	0.49	-2.1
3,653,455	+		Sama_3074	0.58	-0.8
3,653,455	+		Sama_3074	0.58	+1.8
3,653,455	+		Sama_3074	0.58	-1.3
3,653,456	-		Sama_3074	0.58	-2.1
3,653,459	+		Sama_3074	0.58	-2.0
3,653,459	+		Sama_3074	0.58	+0.4
3,653,459	+		Sama_3074	0.58	-1.3
3,653,459	+		Sama_3074	0.58	-1.5
3,653,460	-		Sama_3074	0.58	+0.4
3,653,460	-		Sama_3074	0.58	-1.7
3,653,476	+		Sama_3074	0.60	-2.1
3,653,503	+		Sama_3074	0.62	-2.3
3,653,503	+		Sama_3074	0.62	-0.8
3,653,559	+		Sama_3074	0.68	-1.2