Strain Fitness in Shewanella amazonensis SB2B around Sama_2697

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
3,228,016	-		Sama_2696	0.87	+0.4
3,228,016	-		Sama_2696	0.87	-2.3
3,228,016	-		Sama_2696	0.87	-2.2
3,228,016	-		Sama_2696	0.87	+0.1
3,228,063	+		Sama_2696	0.88	+0.2
3,228,063	+		Sama_2696	0.88	+1.4
3,228,063	+		Sama_2696	0.88	-0.3
3,228,064	-		Sama_2696	0.88	-0.9
3,228,109	-		Sama_2696	0.89	-0.5
3,228,109	-		Sama_2696	0.89	-0.9
3,228,109	-		Sama_2696	0.89	-1.0
3,228,126	-		Sama_2696	0.89	-0.6
3,228,127	+		Sama_2696	0.89	-0.7
3,228,128	-		Sama_2696	0.89	-0.1
3,228,194	+				-1.3
3,228,194	+				+0.4
3,228,194	+				-1.1
3,228,194	+				+4.2
3,228,195	-				+0.5
3,228,195	-				-1.3
3,228,195	-				+0.3
3,228,195	-				-0.1
3,228,241	+				+0.6
3,228,241	+				+0.0
3,228,241	+				-0.5
3,228,241	+				-0.6
3,228,242	-				+0.2
3,228,242	-				+2.3
3,228,253	+				+1.6
3,228,296	+				+0.4
3,228,340	+				-1.9
3,228,356	+				-1.5
3,228,356	+				-1.8
3,228,357	-				-0.6
3,228,357	-				+1.3
3,228,357	-				+1.4
3,228,401	+				-1.4
3,228,401	+				+1.6
3,228,402	-				-0.1
3,228,402	-				+0.0
3,228,402	-				+1.6
3,228,484	+				-0.9
3,228,485	-				+0.2
3,228,485	-				-0.1
3,228,515	+				-1.1
3,228,516	-				+0.1
3,228,516	-				-0.9
3,228,516	-				+1.4
3,228,656	-				-1.5
3,228,731	-				-0.1
3,228,746	+				+0.1
3,228,746	+				-0.5
3,228,746	+				-1.2
3,228,841	+				+0.1
3,228,866	+				+0.4
3,228,908	+				+1.3
3,228,908	+				-0.5
3,229,013	+				-0.5
3,229,029	+				-2.5
3,229,030	-				-0.9
3,229,036	-				-1.2
3,229,045	-				-0.9
3,229,045	-				-1.5
3,229,075	+				-2.5
3,229,076	-				-0.1
3,229,076	-				+1.3
3,229,121	+		Sama_2697	0.12	+0.3
3,229,121	+		Sama_2697	0.12	-1.6
3,229,122	-		Sama_2697	0.13	-1.3
3,229,122	-		Sama_2697	0.13	-0.5
3,229,190	+		Sama_2697	0.21	+1.1
3,229,190	+		Sama_2697	0.21	+1.3
3,229,190	+		Sama_2697	0.21	-0.3
3,229,194	+		Sama_2697	0.21	+0.4
3,229,194	+		Sama_2697	0.21	+0.1
3,229,194	+		Sama_2697	0.21	-1.7
3,229,194	+		Sama_2697	0.21	+1.2
3,229,195	-		Sama_2697	0.21	+0.6
3,229,195	-		Sama_2697	0.21	+0.6
3,229,214	+		Sama_2697	0.23	-2.3
3,229,215	-		Sama_2697	0.24	+0.7
3,229,215	-		Sama_2697	0.24	+2.6
3,229,215	-		Sama_2697	0.24	-2.9
3,229,260	+		Sama_2697	0.29	+0.1
3,229,260	+		Sama_2697	0.29	-0.2
3,229,260	+		Sama_2697	0.29	+1.2
3,229,260	+		Sama_2697	0.29	-1.7
3,229,260	+		Sama_2697	0.29	+0.1
3,229,260	+		Sama_2697	0.29	+0.7
3,229,260	+		Sama_2697	0.29	-0.1
3,229,261	-		Sama_2697	0.29	-0.7
3,229,261	-		Sama_2697	0.29	-3.6
3,229,261	-		Sama_2697	0.29	+1.2
3,229,261	-		Sama_2697	0.29	+1.2
3,229,261	-		Sama_2697	0.29	+0.5
3,229,261	-		Sama_2697	0.29	+0.5
3,229,261	-		Sama_2697	0.29	-0.1
3,229,261	-		Sama_2697	0.29	-1.5
3,229,261	-		Sama_2697	0.29	+1.3
3,229,261	-		Sama_2697	0.29	+1.2
3,229,262	+		Sama_2697	0.29	-2.4
3,229,262	+		Sama_2697	0.29	-1.7
3,229,263	-		Sama_2697	0.29	-1.0
3,229,263	-		Sama_2697	0.29	-1.5
3,229,263	-		Sama_2697	0.29	-0.3
3,229,263	-		Sama_2697	0.29	-1.5
3,229,263	-		Sama_2697	0.29	-0.7
3,229,263	-		Sama_2697	0.29	-1.1
3,229,263	-		Sama_2697	0.29	-0.9
3,229,263	-		Sama_2697	0.29	+1.2
3,229,263	-		Sama_2697	0.29	-0.3
3,229,263	-		Sama_2697	0.29	+0.5
3,229,263	-		Sama_2697	0.29	-0.2
3,229,263	-		Sama_2697	0.29	+1.0
3,229,263	-		Sama_2697	0.29	+0.5
3,229,263	-		Sama_2697	0.29	+0.5
3,229,278	-		Sama_2697	0.31	+1.3
3,229,306	+		Sama_2697	0.34	-0.8
3,229,306	+		Sama_2697	0.34	+1.3
3,229,357	+		Sama_2697	0.40	-1.7
3,229,358	-		Sama_2697	0.40	-0.7
3,229,433	-		Sama_2697	0.49	-1.5
3,229,445	+		Sama_2697	0.51	-1.5
3,229,445	+		Sama_2697	0.51	-0.4
3,229,445	+		Sama_2697	0.51	-0.9
3,229,445	+		Sama_2697	0.51	-2.7
3,229,446	-		Sama_2697	0.51	-0.5
3,229,446	-		Sama_2697	0.51	-0.4
3,229,495	-		Sama_2697	0.57	-0.8
3,229,495	-		Sama_2697	0.57	-1.0
3,229,495	-		Sama_2697	0.57	+2.0
3,229,495	-		Sama_2697	0.57	-0.2
3,229,495	-		Sama_2697	0.57	+0.1
3,229,533	-		Sama_2697	0.61	+1.6
3,229,562	+		Sama_2697	0.65	-1.3
3,229,563	-		Sama_2697	0.65	-0.9
3,229,607	+		Sama_2697	0.70	-0.2
3,229,608	-		Sama_2697	0.70	+3.0
3,229,631	+		Sama_2697	0.73	+0.8
3,229,631	+		Sama_2697	0.73	+0.6
3,229,635	-		Sama_2697	0.73	-3.2
3,229,727	+		Sama_2697	0.84	-1.8
3,229,728	-		Sama_2697	0.84	-0.4
3,229,752	+		Sama_2697	0.87	+0.3
3,229,824	+				+0.6
3,229,825	-				+2.2
3,229,827	+				+1.8
3,229,828	-				-0.9
3,229,828	-				-0.0
3,229,832	+				-2.5
3,229,883	+				+0.1
3,229,883	+				+1.7
3,229,883	+				-0.6
3,229,884	-				-0.6
3,229,884	-				+0.2
3,229,884	-				-1.3
3,229,908	-		Sama_2698	0.10	-1.3
3,229,908	-		Sama_2698	0.10	+0.5
3,229,916	+		Sama_2698	0.12	-0.3
3,229,916	+		Sama_2698	0.12	-1.6
3,229,916	+		Sama_2698	0.12	+0.4
3,229,916	+		Sama_2698	0.12	-0.3
3,229,917	-		Sama_2698	0.13	+0.7
3,229,955	+		Sama_2698	0.22	-1.2
3,229,955	+		Sama_2698	0.22	+0.2
3,229,956	-		Sama_2698	0.22	+0.4
3,229,981	+		Sama_2698	0.29	+2.0
3,229,982	-		Sama_2698	0.29	-0.4
3,230,083	+		Sama_2698	0.55	+0.6
3,230,083	+		Sama_2698	0.55	+0.4
3,230,084	-		Sama_2698	0.55	-1.2
3,230,092	+		Sama_2698	0.57	+0.6
3,230,092	+		Sama_2698	0.57	-2.8
3,230,092	+		Sama_2698	0.57	-0.5
3,230,092	+		Sama_2698	0.57	+1.0
3,230,093	-		Sama_2698	0.57	-1.0
3,230,135	+		Sama_2698	0.68	-1.9
3,230,136	-		Sama_2698	0.68	-0.6
3,230,136	-		Sama_2698	0.68	-0.9
3,230,136	-		Sama_2698	0.68	-0.5
3,230,136	-		Sama_2698	0.68	+0.1
3,230,161	-		Sama_2698	0.74	+0.2
3,230,161	-		Sama_2698	0.74	-1.7
3,230,178	+		Sama_2698	0.79	-1.5
3,230,178	+		Sama_2698	0.79	+0.0
3,230,178	+		Sama_2698	0.79	-0.9
3,230,178	+		Sama_2698	0.79	+0.2
3,230,178	+		Sama_2698	0.79	+1.2
3,230,178	+		Sama_2698	0.79	+0.2
3,230,179	-		Sama_2698	0.79	-1.3
3,230,179	-		Sama_2698	0.79	-0.8
3,230,179	-		Sama_2698	0.79	+0.6
3,230,269	+				-1.9
3,230,269	+				-0.6
3,230,269	+				+0.2
3,230,269	+				+0.3
3,230,269	+				-0.2
3,230,269	+				+0.1
3,230,270	-				+0.1
3,230,270	-				+0.0
3,230,290	+				+0.4
3,230,291	-				-1.2
3,230,301	+				+1.0
3,230,301	+				+0.8
3,230,301	+				+0.4
3,230,320	+				-0.8
3,230,392	+		Sama_2699	0.19	+0.1
3,230,392	+		Sama_2699	0.19	-0.9
3,230,392	+		Sama_2699	0.19	-0.6
3,230,416	+		Sama_2699	0.22	+1.9
3,230,416	+		Sama_2699	0.22	+2.6
3,230,417	-		Sama_2699	0.22	+0.6
3,230,521	+		Sama_2699	0.37	+0.0
3,230,522	-		Sama_2699	0.37	-0.1
3,230,522	-		Sama_2699	0.37	-2.0
3,230,522	-		Sama_2699	0.37	-0.4
3,230,533	+		Sama_2699	0.39	-1.1
3,230,533	+		Sama_2699	0.39	-1.7
3,230,533	+		Sama_2699	0.39	-1.5
3,230,543	+		Sama_2699	0.40	+0.6
3,230,562	+		Sama_2699	0.43	-1.1
3,230,562	+		Sama_2699	0.43	-2.1
3,230,562	+		Sama_2699	0.43	+1.1
3,230,563	-		Sama_2699	0.43	+0.6
3,230,563	-		Sama_2699	0.43	-0.9
3,230,563	-		Sama_2699	0.43	+0.1
3,230,563	-		Sama_2699	0.43	+0.8
3,230,563	-		Sama_2699	0.43	+0.3
3,230,563	-		Sama_2699	0.43	+1.1
3,230,563	-		Sama_2699	0.43	+0.6
3,230,563	-		Sama_2699	0.43	-0.8
3,230,564	+		Sama_2699	0.43	-0.3
3,230,564	+		Sama_2699	0.43	+0.1
3,230,564	+		Sama_2699	0.43	-0.1
3,230,564	+		Sama_2699	0.43	-0.4
3,230,564	+		Sama_2699	0.43	-0.4
3,230,565	-		Sama_2699	0.43	-0.6
3,230,565	-		Sama_2699	0.43	-0.2
3,230,594	-		Sama_2699	0.47	+0.6
3,230,618	-		Sama_2699	0.51	-0.7
3,230,759	-		Sama_2699	0.71	+0.2
3,230,794	-		Sama_2699	0.76	-0.6