Strain Fitness in Shewanella amazonensis SB2B around Sama_1866

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
2,274,183	+				-1.0
2,274,183	+				-0.7
2,274,183	+				-0.3
2,274,184	-				+2.8
2,274,184	-				+0.1
2,274,184	-				-0.1
2,274,184	-				-0.9
2,274,184	-				-2.1
2,274,184	-				+0.8
2,274,184	-				+1.5
2,274,184	-				-1.8
2,274,184	-				-0.5
2,274,250	+				+1.8
2,274,254	+				-0.7
2,274,254	+				-0.3
2,274,255	-				+0.6
2,274,255	-				+0.6
2,274,255	-				-1.2
2,274,418	-		Sama_1865	0.31	-1.9
2,274,478	+		Sama_1865	0.40	+1.7
2,274,535	+		Sama_1865	0.48	-0.2
2,274,535	+		Sama_1865	0.48	-1.2
2,274,536	-		Sama_1865	0.48	+0.6
2,274,536	-		Sama_1865	0.48	+2.0
2,274,610	+		Sama_1865	0.59	-1.3
2,274,610	+		Sama_1865	0.59	+1.6
2,274,611	-		Sama_1865	0.59	-1.3
2,274,611	-		Sama_1865	0.59	+2.3
2,274,611	-		Sama_1865	0.59	-0.1
2,274,611	-		Sama_1865	0.59	+2.8
2,274,611	-		Sama_1865	0.59	-0.5
2,274,611	-		Sama_1865	0.59	-1.1
2,274,611	-		Sama_1865	0.59	+0.6
2,274,614	+		Sama_1865	0.60	-1.1
2,274,615	-		Sama_1865	0.60	+0.5
2,274,677	-		Sama_1865	0.69	+0.4
2,274,677	-		Sama_1865	0.69	-0.6
2,274,677	-		Sama_1865	0.69	-0.1
2,274,678	+		Sama_1865	0.69	+0.1
2,274,678	+		Sama_1865	0.69	+0.1
2,274,678	+		Sama_1865	0.69	+0.4
2,274,679	-		Sama_1865	0.69	-0.5
2,274,679	-		Sama_1865	0.69	-0.3
2,274,679	-		Sama_1865	0.69	+2.5
2,274,679	-		Sama_1865	0.69	-1.1
2,274,679	-		Sama_1865	0.69	-0.6
2,274,846	+				+0.9
2,275,013	-				-1.1
2,275,013	-				-0.2
2,275,015	-				-0.9
2,275,035	-				+0.1
2,275,035	-				+0.2
2,275,246	-		Sama_1866	0.14	-0.3
2,275,322	+		Sama_1866	0.19	+1.0
2,275,322	+		Sama_1866	0.19	-0.3
2,275,365	+		Sama_1866	0.22	-0.8
2,275,365	+		Sama_1866	0.22	+0.2
2,275,365	+		Sama_1866	0.22	+0.2
2,275,366	-		Sama_1866	0.22	-0.8
2,275,366	-		Sama_1866	0.22	+0.2
2,275,366	-		Sama_1866	0.22	-0.2
2,275,378	-		Sama_1866	0.23	+1.4
2,275,378	-		Sama_1866	0.23	-0.3
2,275,378	-		Sama_1866	0.23	+1.6
2,275,378	-		Sama_1866	0.23	+0.0
2,275,378	-		Sama_1866	0.23	-0.9
2,275,451	+		Sama_1866	0.28	-0.3
2,275,451	+		Sama_1866	0.28	+0.9
2,275,451	+		Sama_1866	0.28	-0.9
2,275,451	+		Sama_1866	0.28	-0.1
2,275,451	+		Sama_1866	0.28	+0.6
2,275,452	-		Sama_1866	0.28	+1.3
2,275,452	-		Sama_1866	0.28	+0.4
2,275,452	-		Sama_1866	0.28	-0.5
2,275,452	-		Sama_1866	0.28	+2.4
2,275,452	-		Sama_1866	0.28	-0.5
2,275,452	-		Sama_1866	0.28	+0.2
2,275,488	+		Sama_1866	0.31	-0.4
2,275,488	+		Sama_1866	0.31	+1.2
2,275,523	-		Sama_1866	0.33	-0.6
2,275,523	-		Sama_1866	0.33	-0.5
2,275,556	+		Sama_1866	0.36	-0.6
2,275,556	+		Sama_1866	0.36	-0.5
2,275,556	+		Sama_1866	0.36	+2.0
2,275,566	-		Sama_1866	0.36	+1.7
2,275,594	+		Sama_1866	0.38	-1.9
2,275,594	+		Sama_1866	0.38	+0.1
2,275,594	+		Sama_1866	0.38	+0.8
2,275,595	-		Sama_1866	0.38	+0.0
2,275,595	-		Sama_1866	0.38	+0.7
2,275,595	-		Sama_1866	0.38	+0.2
2,275,651	-		Sama_1866	0.42	+0.1
2,275,977	+		Sama_1866	0.66	-0.4
2,275,978	-		Sama_1866	0.66	-0.4
2,276,043	+		Sama_1866	0.70	+0.9
2,276,074	+		Sama_1866	0.72	+0.6
2,276,074	+		Sama_1866	0.72	-0.2
2,276,074	+		Sama_1866	0.72	-2.6
2,276,075	-		Sama_1866	0.73	+0.9
2,276,075	-		Sama_1866	0.73	+1.3
2,276,075	-		Sama_1866	0.73	+2.1
2,276,075	-		Sama_1866	0.73	+0.7
2,276,075	-		Sama_1866	0.73	+0.7
2,276,075	-		Sama_1866	0.73	+0.6
2,276,075	-		Sama_1866	0.73	+1.3
2,276,076	+		Sama_1866	0.73	-0.8
2,276,142	+		Sama_1866	0.77	-2.5
2,276,142	+		Sama_1866	0.77	-1.1
2,276,142	+		Sama_1866	0.77	-1.4
2,276,142	+		Sama_1866	0.77	+0.9
2,276,143	-		Sama_1866	0.77	+0.7
2,276,143	-		Sama_1866	0.77	-1.6
2,276,143	-		Sama_1866	0.77	+0.0
2,276,143	-		Sama_1866	0.77	-0.2
2,276,146	+		Sama_1866	0.78	-0.3
2,276,147	-		Sama_1866	0.78	+0.7
2,276,174	+		Sama_1866	0.80	+1.6
2,276,193	+		Sama_1866	0.81	+1.0
2,276,194	-		Sama_1866	0.81	+0.3
2,276,194	-		Sama_1866	0.81	-1.3
2,276,205	+		Sama_1866	0.82	-0.2
2,276,206	-		Sama_1866	0.82	-1.4
2,276,235	-		Sama_1866	0.84	+2.8
2,276,235	-		Sama_1866	0.84	-0.9
2,276,235	-		Sama_1866	0.84	-1.4
2,276,235	-		Sama_1866	0.84	+0.5
2,276,330	+				-1.4
2,276,331	-				-1.2
2,276,343	+				+0.1
2,276,343	+				+0.4
2,276,344	-				-0.0
2,276,458	+				+0.0
2,276,461	+				+0.4
2,276,463	+				-0.8
2,276,463	+				-0.4
2,276,463	+				+0.6
2,276,463	+				+0.0
2,276,463	+				-2.3
2,276,464	-				-2.7
2,276,528	+				+0.5
2,276,528	+				-0.6
2,276,528	+				-0.4
2,276,529	-				+1.8
2,276,530	+				+0.0
2,276,530	+				+0.8
2,276,530	+				+0.8
2,276,530	+				+0.5
2,276,530	+				+0.8
2,276,530	+				+1.3
2,276,531	-		Sama_1867	0.10	-1.1
2,276,531	-		Sama_1867	0.10	+0.3
2,276,531	-		Sama_1867	0.10	+1.8
2,276,531	-		Sama_1867	0.10	-0.5
2,276,565	+		Sama_1867	0.20	+0.1
2,276,565	+		Sama_1867	0.20	+1.5
2,276,565	+		Sama_1867	0.20	+1.2
2,276,571	-		Sama_1867	0.22	-1.2
2,276,610	+		Sama_1867	0.33	-0.8
2,276,788	-		Sama_1867	0.85	-1.8
2,276,832	+				-0.1
2,276,832	+				+0.2
2,276,851	+				+0.0
2,276,851	+				+0.9
2,276,851	+				+2.1
2,276,851	+				+1.1
2,276,852	-				+0.8
2,276,852	-				-1.2
2,276,893	+				+0.6
2,277,008	+		Sama_1868	0.21	+3.1
2,277,008	+		Sama_1868	0.21	+0.6
2,277,011	+		Sama_1868	0.22	-0.3
2,277,011	+		Sama_1868	0.22	-1.2
2,277,012	-		Sama_1868	0.22	-1.5
2,277,026	-		Sama_1868	0.24	-1.1
2,277,200	+		Sama_1868	0.48	-0.1
2,277,200	+		Sama_1868	0.48	-0.1
2,277,201	-		Sama_1868	0.48	+1.4
2,277,201	-		Sama_1868	0.48	-0.1
2,277,242	+		Sama_1868	0.53	+1.5
2,277,341	+		Sama_1868	0.67	-0.1
2,277,341	+		Sama_1868	0.67	+1.4