Strain Fitness in Shewanella amazonensis SB2B around Sama_1660

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
2,027,256	+		Sama_1659	0.52	-1.0
2,027,257	-		Sama_1659	0.52	-0.8
2,027,333	+		Sama_1659	0.56	+0.0
2,027,344	+		Sama_1659	0.56	+2.0
2,027,507	-		Sama_1659	0.65	-0.7
2,027,507	-		Sama_1659	0.65	+0.2
2,027,507	-		Sama_1659	0.65	-0.0
2,027,509	+		Sama_1659	0.65	+0.4
2,027,510	-		Sama_1659	0.65	-0.2
2,027,510	-		Sama_1659	0.65	+2.1
2,027,530	+		Sama_1659	0.66	-0.4
2,027,596	+		Sama_1659	0.70	-1.5
2,027,597	-		Sama_1659	0.70	+0.5
2,027,622	+		Sama_1659	0.71	-2.0
2,027,639	+		Sama_1659	0.72	-0.1
2,027,639	+		Sama_1659	0.72	+2.5
2,027,639	+		Sama_1659	0.72	+0.6
2,027,639	+		Sama_1659	0.72	+0.6
2,027,640	-		Sama_1659	0.72	+0.8
2,027,665	-		Sama_1659	0.73	-1.5
2,027,676	-		Sama_1659	0.74	+0.4
2,027,676	-		Sama_1659	0.74	+0.7
2,027,728	+		Sama_1659	0.77	-1.9
2,027,728	+		Sama_1659	0.77	+0.6
2,027,728	+		Sama_1659	0.77	+0.4
2,027,728	+		Sama_1659	0.77	-0.3
2,027,728	+		Sama_1659	0.77	-0.2
2,027,728	+		Sama_1659	0.77	+0.1
2,027,729	-		Sama_1659	0.77	-0.2
2,027,729	-		Sama_1659	0.77	+0.0
2,027,729	-		Sama_1659	0.77	-0.3
2,027,729	-		Sama_1659	0.77	-0.2
2,027,731	+		Sama_1659	0.77	-1.4
2,027,747	-		Sama_1659	0.78	+1.0
2,027,800	+		Sama_1659	0.81	+1.7
2,027,800	+		Sama_1659	0.81	-0.5
2,027,800	+		Sama_1659	0.81	-1.8
2,027,801	-		Sama_1659	0.81	+1.2
2,027,801	-		Sama_1659	0.81	-0.1
2,027,804	+		Sama_1659	0.81	-0.9
2,027,804	+		Sama_1659	0.81	-0.1
2,027,804	+		Sama_1659	0.81	-0.0
2,027,805	-		Sama_1659	0.81	+0.1
2,027,805	-		Sama_1659	0.81	+0.5
2,027,809	+		Sama_1659	0.81	-0.5
2,027,809	+		Sama_1659	0.81	-2.3
2,027,809	+		Sama_1659	0.81	-0.8
2,027,810	-		Sama_1659	0.81	-0.3
2,027,810	-		Sama_1659	0.81	-1.6
2,027,810	-		Sama_1659	0.81	-1.5
2,027,810	-		Sama_1659	0.81	+0.1
2,027,845	+		Sama_1659	0.83	+0.1
2,027,860	-		Sama_1659	0.84	-0.8
2,027,874	-		Sama_1659	0.85	-2.0
2,027,874	-		Sama_1659	0.85	-0.1
2,027,931	+		Sama_1659	0.88	-0.9
2,027,931	+		Sama_1659	0.88	-0.7
2,027,932	-		Sama_1659	0.88	+1.8
2,027,932	-		Sama_1659	0.88	+0.3
2,027,932	-		Sama_1659	0.88	-1.3
2,027,932	-		Sama_1659	0.88	+0.1
2,027,992	+				-0.2
2,027,992	+				-1.2
2,028,051	+				-0.6
2,028,052	-				-0.3
2,028,068	+				-1.0
2,028,068	+				-0.7
2,028,069	-				-0.2
2,028,069	-				+0.3
2,028,069	-				+2.0
2,028,069	-				-0.6
2,028,080	+				+1.6
2,028,080	+				+0.8
2,028,080	+				-1.5
2,028,080	+				+3.5
2,028,081	-				-1.7
2,028,081	-				-0.5
2,028,081	-				-0.8
2,028,081	-				-0.3
2,028,251	+				-0.5
2,028,251	+				-0.7
2,028,252	-				+0.8
2,028,252	-				+1.3
2,028,320	-				+1.6
2,028,328	+				+0.2
2,028,328	+				-0.7
2,028,328	+				+2.9
2,028,328	+				+1.8
2,028,329	-				-2.6
2,028,384	+		Sama_1660	0.10	-1.5
2,028,384	+		Sama_1660	0.10	-0.5
2,028,384	+		Sama_1660	0.10	-0.0
2,028,384	+		Sama_1660	0.10	-0.5
2,028,385	-		Sama_1660	0.10	+0.3
2,028,385	-		Sama_1660	0.10	-1.2
2,028,385	-		Sama_1660	0.10	-0.0
2,028,385	-		Sama_1660	0.10	-1.5
2,028,385	-		Sama_1660	0.10	-0.8
2,028,385	-		Sama_1660	0.10	-2.7
2,028,385	-		Sama_1660	0.10	-0.1
2,028,385	-		Sama_1660	0.10	+0.3
2,028,509	+		Sama_1660	0.17	+1.3
2,028,509	+		Sama_1660	0.17	+1.1
2,028,509	+		Sama_1660	0.17	+1.2
2,028,509	+		Sama_1660	0.17	-0.4
2,028,510	-		Sama_1660	0.17	+1.7
2,028,510	-		Sama_1660	0.17	-0.7
2,028,510	-		Sama_1660	0.17	-0.8
2,028,510	-		Sama_1660	0.17	-1.2
2,028,510	-		Sama_1660	0.17	-0.0
2,028,510	-		Sama_1660	0.17	-1.3
2,028,510	-		Sama_1660	0.17	+0.0
2,028,520	+		Sama_1660	0.17	+0.6
2,028,521	-		Sama_1660	0.17	-0.9
2,028,615	+		Sama_1660	0.22	-0.1
2,028,651	+		Sama_1660	0.23	+0.4
2,028,652	-		Sama_1660	0.23	-0.2
2,028,699	+		Sama_1660	0.26	+0.1
2,028,700	-		Sama_1660	0.26	+0.0
2,028,700	-		Sama_1660	0.26	+0.5
2,028,762	+		Sama_1660	0.29	-1.6
2,028,764	-		Sama_1660	0.29	+0.0
2,028,764	-		Sama_1660	0.29	-0.2
2,028,783	+		Sama_1660	0.30	-0.2
2,028,783	+		Sama_1660	0.30	+0.7
2,028,783	+		Sama_1660	0.30	-0.2
2,028,783	+		Sama_1660	0.30	-0.3
2,028,784	-		Sama_1660	0.30	+0.1
2,028,784	-		Sama_1660	0.30	+0.8
2,028,836	+		Sama_1660	0.32	-0.5
2,028,836	+		Sama_1660	0.32	-0.4
2,028,885	+		Sama_1660	0.35	-0.3
2,028,918	+		Sama_1660	0.36	-0.3
2,028,926	+		Sama_1660	0.37	+0.3
2,028,975	+		Sama_1660	0.39	-0.3
2,029,018	+		Sama_1660	0.41	-0.8
2,029,019	-		Sama_1660	0.41	+0.4
2,029,019	-		Sama_1660	0.41	-0.2
2,029,019	-		Sama_1660	0.41	+0.3
2,029,019	-		Sama_1660	0.41	-0.5
2,029,019	-		Sama_1660	0.41	+0.1
2,029,084	+		Sama_1660	0.45	+0.3
2,029,099	-		Sama_1660	0.45	-0.0
2,029,099	-		Sama_1660	0.45	-0.4
2,029,099	-		Sama_1660	0.45	+1.0
2,029,191	+		Sama_1660	0.50	-1.7
2,029,255	+		Sama_1660	0.53	-0.5
2,029,256	-		Sama_1660	0.53	+0.2
2,029,304	+		Sama_1660	0.55	+0.9
2,029,304	+		Sama_1660	0.55	+0.2
2,029,305	-		Sama_1660	0.55	-1.6
2,029,307	+		Sama_1660	0.55	+1.7
2,029,307	+		Sama_1660	0.55	-0.3
2,029,307	+		Sama_1660	0.55	-0.6
2,029,308	-		Sama_1660	0.55	-1.9
2,029,363	-		Sama_1660	0.58	-0.1
2,029,363	-		Sama_1660	0.58	-2.3
2,029,425	+		Sama_1660	0.61	+2.1
2,029,425	+		Sama_1660	0.61	+1.3
2,029,425	+		Sama_1660	0.61	-0.4
2,029,431	+		Sama_1660	0.61	+1.0
2,029,492	+		Sama_1660	0.64	-1.8
2,029,493	-		Sama_1660	0.64	+1.0
2,029,497	+		Sama_1660	0.65	-1.1
2,029,572	+		Sama_1660	0.68	-0.8
2,029,572	+		Sama_1660	0.68	-1.2
2,029,573	-		Sama_1660	0.68	-1.3
2,029,624	+		Sama_1660	0.71	-1.4
2,029,659	+		Sama_1660	0.73	-1.2
2,029,659	+		Sama_1660	0.73	-1.3
2,029,660	-		Sama_1660	0.73	-0.9
2,029,717	+		Sama_1660	0.75	-0.2
2,029,717	+		Sama_1660	0.75	+0.3
2,029,776	-		Sama_1660	0.78	-0.3
2,029,799	-		Sama_1660	0.79	-1.6
2,029,833	+		Sama_1660	0.81	-1.0
2,029,833	+		Sama_1660	0.81	-0.5
2,029,833	+		Sama_1660	0.81	+1.9
2,029,833	+		Sama_1660	0.81	-0.0
2,029,900	+		Sama_1660	0.84	-2.2
2,029,901	-		Sama_1660	0.84	+0.7
2,030,065	+				-1.1
2,030,066	-				+3.1
2,030,066	-				-0.9
2,030,066	-				-1.7
2,030,066	-				+0.5
2,030,250	+				+0.9
2,030,306	+				+1.0
2,030,306	+				+0.1
2,030,307	-				+0.1
2,030,307	-				+0.1
2,030,316	-				-1.8
2,030,333	+				+0.9
2,030,434	-				+1.2
2,030,453	+				+0.9
2,030,490	-				-0.7
2,030,531	+				+0.8
2,030,531	+				+0.8
2,030,531	+				-0.5
2,030,532	-				-0.3
2,030,582	+				+2.6
2,030,583	-				+0.3
2,030,599	-		Sama_1661	0.10	-2.5
2,030,684	+		Sama_1661	0.13	-0.5
2,030,684	+		Sama_1661	0.13	+0.4
2,030,684	+		Sama_1661	0.13	+0.0
2,030,684	+		Sama_1661	0.13	+0.3
2,030,685	-		Sama_1661	0.13	+1.0
2,030,691	-		Sama_1661	0.14	-0.6
2,030,741	-		Sama_1661	0.15	+0.0
2,030,750	+		Sama_1661	0.16	-1.0
2,030,751	-		Sama_1661	0.16	-0.7
2,030,751	-		Sama_1661	0.16	-0.3
2,030,751	-		Sama_1661	0.16	+0.1
2,030,774	+		Sama_1661	0.17	-0.4
2,030,775	-		Sama_1661	0.17	-1.5
2,030,807	+		Sama_1661	0.18	+1.0
2,030,808	-		Sama_1661	0.18	+2.4
2,030,902	+		Sama_1661	0.21	-0.6
2,030,916	+		Sama_1661	0.22	+0.2
2,030,916	+		Sama_1661	0.22	-0.2
2,030,940	-		Sama_1661	0.22	-0.7
2,030,981	+		Sama_1661	0.24	-0.0
2,030,990	+		Sama_1661	0.24	+0.9
2,030,991	-		Sama_1661	0.24	-0.5
2,031,015	-		Sama_1661	0.25	+0.3
2,031,015	-		Sama_1661	0.25	+3.0
2,031,056	+		Sama_1661	0.27	+2.2
2,031,057	-		Sama_1661	0.27	-0.0
2,031,057	-		Sama_1661	0.27	+1.0
2,031,057	-		Sama_1661	0.27	+0.2
2,031,090	-		Sama_1661	0.28	-1.1
2,031,210	-		Sama_1661	0.32	-1.0
2,031,219	-		Sama_1661	0.32	-0.8
2,031,219	-		Sama_1661	0.32	-0.3