Strain Fitness in Shewanella amazonensis SB2B around Sama_1622

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
1,984,857	-				-0.8
1,984,857	-				-0.8
1,984,893	+				-1.9
1,984,912	+				+0.7
1,984,913	-				+1.2
1,984,956	+				-0.3
1,984,956	+				+1.7
1,984,956	+				-0.2
1,985,008	-				+0.9
1,985,016	-				+0.2
1,985,116	+				-0.2
1,985,116	+				+1.3
1,985,116	+				+1.3
1,985,117	-				+1.0
1,985,117	-				+0.0
1,985,117	-				+1.3
1,985,117	-				-1.0
1,985,117	-				-0.2
1,985,117	-				+0.0
1,985,118	+				+3.9
1,985,118	+				+0.0
1,985,118	+				-1.7
1,985,119	-				-0.4
1,985,119	-				+1.0
1,985,119	-				+0.7
1,985,119	-				-0.9
1,985,119	-				+1.4
1,985,172	-				+0.2
1,985,176	-				-0.0
1,985,181	+				+1.0
1,985,181	+				+0.5
1,985,181	+				-1.9
1,985,181	+				-1.0
1,985,182	-				+0.4
1,985,227	+				+0.2
1,985,227	+				-1.3
1,985,251	+				-0.2
1,985,252	-				-1.3
1,985,252	-				-0.7
1,985,252	-				-0.1
1,985,293	+				-1.5
1,985,474	+		Sama_1620	0.84	-0.7
1,985,475	-		Sama_1620	0.85	+0.1
1,985,475	-		Sama_1620	0.85	+1.7
1,985,529	+				-1.0
1,985,529	+				-0.7
1,985,531	+				+0.2
1,985,531	+				-2.3
1,985,531	+				+0.1
1,985,531	+				+1.7
1,985,532	-				-0.6
1,985,532	-				-1.8
1,985,545	+				-0.4
1,985,545	+				-1.6
1,985,545	+				-1.0
1,985,545	+				+0.5
1,985,619	+				-1.9
1,985,619	+				-0.2
1,985,765	+		Sama_1621	0.81	-1.0
1,985,889	+				+0.3
1,985,889	+				+0.7
1,985,890	-				+2.3
1,986,031	-				+0.9
1,986,058	+		Sama_1622	0.10	-0.7
1,986,058	+		Sama_1622	0.10	+0.1
1,986,058	+		Sama_1622	0.10	+0.7
1,986,180	+		Sama_1622	0.15	+0.6
1,986,181	-		Sama_1622	0.15	+0.3
1,986,237	+		Sama_1622	0.18	-2.3
1,986,238	-		Sama_1622	0.18	+0.5
1,986,274	+		Sama_1622	0.19	+0.3
1,986,274	+		Sama_1622	0.19	-2.3
1,986,366	+		Sama_1622	0.23	+0.2
1,986,367	-		Sama_1622	0.23	+0.0
1,986,403	+		Sama_1622	0.24	-0.6
1,986,404	-		Sama_1622	0.24	-0.5
1,986,404	-		Sama_1622	0.24	+2.4
1,986,625	+		Sama_1622	0.33	+0.9
1,986,625	+		Sama_1622	0.33	-0.0
1,986,625	+		Sama_1622	0.33	-0.1
1,986,625	+		Sama_1622	0.33	+2.0
1,986,625	+		Sama_1622	0.33	-1.9
1,986,625	+		Sama_1622	0.33	+0.9
1,986,626	-		Sama_1622	0.33	+1.2
1,986,626	-		Sama_1622	0.33	+1.0
1,986,626	-		Sama_1622	0.33	+0.4
1,986,626	-		Sama_1622	0.33	+0.4
1,986,626	-		Sama_1622	0.33	+1.5
1,986,626	-		Sama_1622	0.33	+1.9
1,986,626	-		Sama_1622	0.33	-0.2
1,986,626	-		Sama_1622	0.33	-0.2
1,986,626	-		Sama_1622	0.33	+0.5
1,986,707	-		Sama_1622	0.36	+0.5
1,986,815	-		Sama_1622	0.41	+1.4
1,986,957	+		Sama_1622	0.46	-0.1
1,986,958	-		Sama_1622	0.46	-0.1
1,986,971	-		Sama_1622	0.47	-0.3
1,986,971	-		Sama_1622	0.47	-1.7
1,987,234	+		Sama_1622	0.57	+0.2
1,987,247	+		Sama_1622	0.58	+0.1
1,987,247	+		Sama_1622	0.58	-1.4
1,987,273	-		Sama_1622	0.59	+2.0
1,987,411	+		Sama_1622	0.65	-2.4
1,987,411	+		Sama_1622	0.65	+1.2
1,987,411	+		Sama_1622	0.65	+0.3
1,987,515	+		Sama_1622	0.69	+1.0
1,987,564	+		Sama_1622	0.71	+0.5
1,987,564	+		Sama_1622	0.71	-2.3
1,987,582	+		Sama_1622	0.71	+0.7
1,987,582	+		Sama_1622	0.71	+0.7
1,987,583	-		Sama_1622	0.71	+1.6
1,987,594	+		Sama_1622	0.72	-1.2
1,987,594	+		Sama_1622	0.72	+0.8
1,987,595	-		Sama_1622	0.72	+0.9
1,987,610	+		Sama_1622	0.73	-0.0
1,987,610	+		Sama_1622	0.73	-1.4
1,987,645	+		Sama_1622	0.74	-1.6
1,987,646	-		Sama_1622	0.74	+1.6
1,987,646	-		Sama_1622	0.74	+0.5
1,987,646	-		Sama_1622	0.74	+1.6
1,987,678	+		Sama_1622	0.75	+0.6
1,987,679	-		Sama_1622	0.75	+1.3
1,987,679	-		Sama_1622	0.75	-1.3
1,987,682	+		Sama_1622	0.75	+0.7
1,987,705	+		Sama_1622	0.76	+0.4
1,987,756	+		Sama_1622	0.78	+2.0
1,987,756	+		Sama_1622	0.78	-0.7
1,987,757	-		Sama_1622	0.78	-0.6
1,987,837	+		Sama_1622	0.82	+0.4
1,987,838	-		Sama_1622	0.82	+0.2
1,987,838	-		Sama_1622	0.82	+0.1
1,987,943	-		Sama_1622	0.86	+2.2
1,987,947	+		Sama_1622	0.86	+1.0
1,987,948	-		Sama_1622	0.86	-1.3
1,987,970	+		Sama_1622	0.87	+0.7
1,987,971	-		Sama_1622	0.87	+1.3
1,988,009	+		Sama_1622	0.89	+0.9
1,988,021	-		Sama_1622	0.89	-0.2
1,988,049	+				-0.7
1,988,131	-				+0.5
1,988,467	+		Sama_1623	0.34	-0.0
1,988,467	+		Sama_1623	0.34	-0.1
1,988,467	+		Sama_1623	0.34	+0.3
1,988,468	-		Sama_1623	0.34	+0.2
1,988,468	-		Sama_1623	0.34	+2.2
1,988,468	-		Sama_1623	0.34	+0.6
1,988,481	-		Sama_1623	0.37	-3.1
1,988,484	+		Sama_1623	0.37	-0.5
1,988,526	+		Sama_1623	0.46	-1.0
1,988,526	+		Sama_1623	0.46	-0.4
1,988,527	-		Sama_1623	0.46	-0.1
1,988,545	+		Sama_1623	0.50	+1.6
1,988,546	-		Sama_1623	0.50	+0.4
1,988,555	+		Sama_1623	0.52	+2.5
1,988,580	-		Sama_1623	0.58	-0.7
1,988,619	+		Sama_1623	0.66	-0.7
1,988,619	+		Sama_1623	0.66	-0.0
1,988,619	+		Sama_1623	0.66	-0.6
1,988,633	+		Sama_1623	0.69	-0.5
1,988,636	+		Sama_1623	0.69	-0.4
1,988,636	+		Sama_1623	0.69	-0.2
1,988,636	+		Sama_1623	0.69	-0.9
1,988,636	+		Sama_1623	0.69	-0.7
1,988,636	+		Sama_1623	0.69	+0.7
1,988,636	+		Sama_1623	0.69	+1.0
1,988,637	-		Sama_1623	0.70	+2.2
1,988,667	+		Sama_1623	0.76	+0.9
1,988,772	-				-0.3
1,988,779	-				+1.8
1,988,788	+				-0.7
1,988,788	+				+0.8
1,988,789	-				+0.3
1,988,906	-		Sama_1624	0.20	+0.7
1,988,975	+		Sama_1624	0.32	+0.1
1,988,975	+		Sama_1624	0.32	+1.2
1,988,975	+		Sama_1624	0.32	-0.4
1,988,975	+		Sama_1624	0.32	+2.3
1,988,975	+		Sama_1624	0.32	-1.5
1,989,068	-		Sama_1624	0.47	+1.9
1,989,109	+		Sama_1624	0.54	+0.8
1,989,121	+		Sama_1624	0.56	+1.4
1,989,236	+		Sama_1624	0.76	-0.3
1,989,236	+		Sama_1624	0.76	-0.4
1,989,236	+		Sama_1624	0.76	+0.6