Strain Fitness in Shewanella amazonensis SB2B around Sama_1083

Experiment: NAG (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (N)
1,309,218	+		Sama_1081	0.65	+2.4
1,309,221	+		Sama_1081	0.65	-0.7
1,309,221	+		Sama_1081	0.65	+0.0
1,309,222	-		Sama_1081	0.65	+0.5
1,309,304	+		Sama_1081	0.71	-1.3
1,309,304	+		Sama_1081	0.71	-0.1
1,309,304	+		Sama_1081	0.71	+0.5
1,309,304	+		Sama_1081	0.71	-0.1
1,309,312	-		Sama_1081	0.72	+1.4
1,309,312	-		Sama_1081	0.72	-0.1
1,309,316	+		Sama_1081	0.72	-0.7
1,309,316	+		Sama_1081	0.72	+1.2
1,309,317	-		Sama_1081	0.72	+0.5
1,309,317	-		Sama_1081	0.72	-0.1
1,309,433	+		Sama_1081	0.81	+1.8
1,309,433	+		Sama_1081	0.81	+1.4
1,309,433	+		Sama_1081	0.81	-0.5
1,309,433	+		Sama_1081	0.81	-2.1
1,309,433	+		Sama_1081	0.81	+2.8
1,309,433	+		Sama_1081	0.81	+0.8
1,309,434	-		Sama_1081	0.81	-1.4
1,309,434	-		Sama_1081	0.81	-1.0
1,309,468	-		Sama_1081	0.83	+0.7
1,309,469	+		Sama_1081	0.83	+0.6
1,309,469	+		Sama_1081	0.83	+0.3
1,309,469	+		Sama_1081	0.83	-1.0
1,309,469	+		Sama_1081	0.83	+0.7
1,309,470	-		Sama_1081	0.83	+0.7
1,309,470	-		Sama_1081	0.83	-0.0
1,309,542	+		Sama_1081	0.88	-1.0
1,309,542	+		Sama_1081	0.88	+1.1
1,309,543	-		Sama_1081	0.89	+1.2
1,309,543	-		Sama_1081	0.89	+0.0
1,309,574	+				-0.2
1,309,685	+				-1.4
1,309,685	+				+2.7
1,309,685	+				+1.2
1,309,685	+				-0.8
1,309,686	-				+0.2
1,309,686	-				+0.8
1,309,686	-				+2.7
1,309,778	+		Sama_1082	0.16	+0.0
1,309,778	+		Sama_1082	0.16	-0.4
1,309,872	-		Sama_1082	0.34	+1.7
1,309,900	+		Sama_1082	0.39	+0.9
1,309,900	+		Sama_1082	0.39	-2.4
1,309,900	+		Sama_1082	0.39	-1.4
1,309,901	-		Sama_1082	0.39	+0.2
1,309,994	-		Sama_1082	0.57	-0.9
1,310,013	+		Sama_1082	0.61	-1.3
1,310,047	+		Sama_1082	0.67	-0.3
1,310,048	-		Sama_1082	0.67	-1.1
1,310,048	-		Sama_1082	0.67	+1.0
1,310,070	+		Sama_1082	0.71	+0.1
1,310,079	+		Sama_1082	0.73	+0.1
1,310,079	+		Sama_1082	0.73	-0.8
1,310,087	+		Sama_1082	0.75	-2.0
1,310,105	+		Sama_1082	0.78	+0.6
1,310,118	+		Sama_1082	0.81	-0.3
1,310,118	+		Sama_1082	0.81	+1.9
1,310,118	+		Sama_1082	0.81	+0.1
1,310,118	+		Sama_1082	0.81	+1.8
1,310,119	-		Sama_1082	0.81	+0.1
1,310,119	-		Sama_1082	0.81	+0.1
1,310,119	-		Sama_1082	0.81	-3.0
1,310,159	-		Sama_1082	0.88	-2.1
1,310,173	+				-2.5
1,310,173	+				+0.9
1,310,174	-				+1.3
1,310,289	+		Sama_1083	0.11	+0.9
1,310,290	-		Sama_1083	0.11	+0.9
1,310,290	-		Sama_1083	0.11	+0.8
1,310,293	+		Sama_1083	0.12	+2.2
1,310,293	+		Sama_1083	0.12	-0.3
1,310,294	-		Sama_1083	0.12	-1.3
1,310,294	-		Sama_1083	0.12	+2.0
1,310,294	-		Sama_1083	0.12	+0.0
1,310,303	-		Sama_1083	0.13	-0.6
1,310,303	-		Sama_1083	0.13	+1.9
1,310,366	+		Sama_1083	0.20	-0.1
1,310,405	+		Sama_1083	0.25	-0.9
1,310,423	+		Sama_1083	0.27	-0.2
1,310,424	-		Sama_1083	0.27	-0.1
1,310,424	-		Sama_1083	0.27	+0.9
1,310,439	-		Sama_1083	0.28	-0.7
1,310,439	-		Sama_1083	0.28	-0.3
1,310,458	-		Sama_1083	0.31	-0.3
1,310,579	+		Sama_1083	0.44	+2.1
1,310,587	+		Sama_1083	0.45	+0.2
1,310,614	-		Sama_1083	0.48	-1.8
1,310,614	-		Sama_1083	0.48	+1.1
1,310,642	+		Sama_1083	0.52	+0.1
1,310,668	+		Sama_1083	0.55	-2.2
1,310,668	+		Sama_1083	0.55	+0.4
1,310,668	+		Sama_1083	0.55	+0.2
1,310,669	-		Sama_1083	0.55	+0.0
1,310,722	+		Sama_1083	0.61	-2.2
1,310,722	+		Sama_1083	0.61	-1.3
1,310,722	+		Sama_1083	0.61	+0.2
1,310,722	+		Sama_1083	0.61	+0.1
1,310,723	-		Sama_1083	0.61	-2.9
1,310,723	-		Sama_1083	0.61	+0.5
1,310,723	-		Sama_1083	0.61	-0.4
1,310,777	+		Sama_1083	0.67	+1.4
1,310,777	+		Sama_1083	0.67	+1.9
1,310,778	-		Sama_1083	0.67	+0.9
1,310,778	-		Sama_1083	0.67	+0.4
1,310,778	-		Sama_1083	0.67	+0.7
1,310,778	-		Sama_1083	0.67	-0.3
1,310,824	-		Sama_1083	0.73	+2.3
1,310,909	-		Sama_1083	0.82	-0.2
1,310,958	-		Sama_1083	0.88	-0.2
1,310,958	-		Sama_1083	0.88	-0.3
1,311,043	+				+0.7
1,311,043	+				+0.0
1,311,044	-				-0.5
1,311,064	+				+1.0
1,311,064	+				-1.2
1,311,065	-				-0.4
1,311,065	-				+1.3
1,311,100	-				-1.1
1,311,100	-				+0.7
1,311,107	+				-0.8
1,311,107	+				+0.3
1,311,107	+				-0.4
1,311,107	+				-1.3
1,311,108	-				+0.1
1,311,108	-				+0.1
1,311,108	-				-0.7
1,311,108	-				+0.2
1,311,108	-				-0.9
1,311,108	-				+0.3
1,311,113	+				-0.4
1,311,113	+				-0.6
1,311,113	+				+0.0
1,311,113	+				+0.6
1,311,113	+				-0.4
1,311,113	+				-0.8
1,311,114	-				+0.4
1,311,114	-				-0.3
1,311,114	-				+0.6
1,311,114	-				-1.2
1,311,114	-				-0.1
1,311,140	+				-1.3
1,311,140	+				+0.4
1,311,141	-				+0.1
1,311,163	-				-0.4
1,311,215	-				+1.0
1,311,282	+				-1.1
1,311,282	+				+1.0
1,311,283	-				+0.8
1,311,295	-				-0.4
1,311,297	+				-1.5
1,311,298	-				-0.8
1,311,396	+				+1.2
1,311,396	+				-0.8
1,311,396	+				+0.0
1,311,396	+				+0.3
1,311,396	+				-1.6
1,311,397	-				+0.6
1,311,397	-				+1.6
1,311,436	+		Sama_1084	0.12	+0.8
1,311,465	+		Sama_1084	0.14	+0.2
1,311,500	-		Sama_1084	0.16	+0.4
1,311,500	-		Sama_1084	0.16	-0.6
1,311,500	-		Sama_1084	0.16	-1.9
1,311,500	-		Sama_1084	0.16	-0.4
1,311,541	+		Sama_1084	0.18	-1.4
1,311,541	+		Sama_1084	0.18	+1.9
1,311,566	+		Sama_1084	0.20	-0.2
1,311,566	+		Sama_1084	0.20	+1.2
1,311,566	+		Sama_1084	0.20	-1.3
1,311,615	-		Sama_1084	0.23	+0.0
1,311,618	-		Sama_1084	0.23	+0.7
1,311,626	+		Sama_1084	0.23	+1.3
1,311,626	+		Sama_1084	0.23	-2.0
1,311,626	+		Sama_1084	0.23	-0.7
1,311,627	-		Sama_1084	0.23	+1.7
1,311,627	-		Sama_1084	0.23	-0.2
1,311,632	+		Sama_1084	0.24	-1.5
1,311,644	+		Sama_1084	0.24	-1.0
1,311,644	+		Sama_1084	0.24	+0.0
1,311,645	-		Sama_1084	0.24	+0.7
1,311,668	+		Sama_1084	0.26	+1.4
1,311,680	+		Sama_1084	0.26	-0.1
1,311,710	+		Sama_1084	0.28	-1.4
1,311,765	+		Sama_1084	0.31	-2.4
1,311,766	-		Sama_1084	0.32	-0.9
1,311,827	+		Sama_1084	0.35	-1.4
1,311,827	+		Sama_1084	0.35	-1.8
1,311,842	+		Sama_1084	0.36	-0.2
1,311,843	-		Sama_1084	0.36	-0.4
1,311,872	+		Sama_1084	0.38	+0.1
1,311,875	+		Sama_1084	0.38	-2.4
1,311,876	-		Sama_1084	0.38	-0.3
1,311,876	-		Sama_1084	0.38	-1.2
1,311,884	+		Sama_1084	0.39	-0.6
1,311,884	+		Sama_1084	0.39	-2.6
1,311,884	+		Sama_1084	0.39	+0.5
1,311,884	+		Sama_1084	0.39	-1.6
1,311,885	-		Sama_1084	0.39	-0.2
1,311,896	+		Sama_1084	0.39	-1.6
1,311,897	-		Sama_1084	0.39	+1.1
1,311,897	-		Sama_1084	0.39	+3.2
1,311,897	-		Sama_1084	0.39	-2.2
1,311,897	-		Sama_1084	0.39	-1.1
1,311,917	-		Sama_1084	0.40	+0.6
1,311,955	+		Sama_1084	0.43	-0.2
1,311,956	-		Sama_1084	0.43	-1.4
1,312,011	-		Sama_1084	0.46	-0.5
1,312,059	+		Sama_1084	0.49	-1.1