Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3736

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
141,349	+		Dshi_3734	0.11	+0.0
141,349	+		Dshi_3734	0.11	-0.2
141,349	+		Dshi_3734	0.11	+1.0
141,349	+		Dshi_3734	0.11	+0.3
141,357	-		Dshi_3734	0.12	-0.3
141,357	-		Dshi_3734	0.12	+0.5
141,357	-		Dshi_3734	0.12	-0.7
141,357	-		Dshi_3734	0.12	-0.2
141,357	-		Dshi_3734	0.12	-0.6
141,357	-		Dshi_3734	0.12	-0.1
141,357	-		Dshi_3734	0.12	+0.1
141,372	+		Dshi_3734	0.14	-0.3
141,372	+		Dshi_3734	0.14	-1.5
141,372	+		Dshi_3734	0.14	+0.6
141,372	+		Dshi_3734	0.14	+0.5
141,380	-		Dshi_3734	0.15	-2.1
141,381	+		Dshi_3734	0.15	-0.4
141,381	+		Dshi_3734	0.15	-1.6
141,389	-		Dshi_3734	0.16	-0.3
141,389	-		Dshi_3734	0.16	-0.5
141,400	+		Dshi_3734	0.17	+0.1
141,400	+		Dshi_3734	0.17	+0.8
141,403	-		Dshi_3734	0.17	+0.4
141,403	-		Dshi_3734	0.17	-0.5
141,403	-		Dshi_3734	0.17	-1.0
141,414	+		Dshi_3734	0.18	-0.3
141,430	+		Dshi_3734	0.20	-0.1
141,431	-		Dshi_3734	0.20	+0.3
141,438	+		Dshi_3734	0.21	-1.5
141,438	+		Dshi_3734	0.21	+0.3
141,438	+		Dshi_3734	0.21	-0.4
141,438	+		Dshi_3734	0.21	-0.5
141,438	+		Dshi_3734	0.21	-0.4
141,438	+		Dshi_3734	0.21	-0.4
141,438	+		Dshi_3734	0.21	-0.7
141,438	+		Dshi_3734	0.21	-0.5
141,438	+		Dshi_3734	0.21	-1.9
141,438	+		Dshi_3734	0.21	-0.2
141,443	+		Dshi_3734	0.22	-0.8
141,443	+		Dshi_3734	0.22	+0.3
141,446	-		Dshi_3734	0.22	-1.6
141,446	-		Dshi_3734	0.22	-0.7
141,446	-		Dshi_3734	0.22	+1.1
141,446	-		Dshi_3734	0.22	+0.1
141,446	-		Dshi_3734	0.22	+0.4
141,446	-		Dshi_3734	0.22	-0.1
141,446	-		Dshi_3734	0.22	+0.2
141,446	-		Dshi_3734	0.22	+0.3
141,446	-		Dshi_3734	0.22	+0.1
141,446	-		Dshi_3734	0.22	-0.9
141,446	-		Dshi_3734	0.22	+0.5
141,525	-		Dshi_3734	0.31	-0.7
141,546	+		Dshi_3734	0.34	+2.2
141,551	+		Dshi_3734	0.34	-0.5
141,554	-		Dshi_3734	0.35	-1.7
141,554	-		Dshi_3734	0.35	-0.8
141,554	-		Dshi_3734	0.35	-0.4
141,554	-		Dshi_3734	0.35	-0.6
141,554	-		Dshi_3734	0.35	+0.4
141,596	+		Dshi_3734	0.39	+0.3
141,596	+		Dshi_3734	0.39	+0.5
141,597	-		Dshi_3734	0.40	-0.2
141,602	+		Dshi_3734	0.40	-0.2
141,609	-		Dshi_3734	0.41	+0.4
141,611	-		Dshi_3734	0.41	-0.9
141,638	+		Dshi_3734	0.44	-0.8
141,638	-		Dshi_3734	0.44	-0.6
141,646	-		Dshi_3734	0.45	-0.4
141,647	+		Dshi_3734	0.45	+1.5
141,659	+		Dshi_3734	0.47	-0.2
141,672	-		Dshi_3734	0.48	+0.1
141,674	-		Dshi_3734	0.48	+2.1
141,703	-		Dshi_3734	0.52	-0.5
141,715	-		Dshi_3734	0.53	-0.2
141,726	-		Dshi_3734	0.54	-0.5
141,737	+		Dshi_3734	0.56	+1.0
141,742	+		Dshi_3734	0.56	-0.4
141,769	-		Dshi_3734	0.59	-0.6
141,792	+		Dshi_3734	0.62	-0.2
141,792	+		Dshi_3734	0.62	-0.4
141,826	-		Dshi_3734	0.66	-0.1
141,836	-		Dshi_3734	0.67	-1.2
141,837	-		Dshi_3734	0.67	-0.3
141,839	+		Dshi_3734	0.67	-0.7
141,846	+		Dshi_3734	0.68	-0.7
141,847	-		Dshi_3734	0.68	-0.1
141,852	-		Dshi_3734	0.69	+1.5
141,858	-		Dshi_3734	0.70	-1.1
141,858	-		Dshi_3734	0.70	+0.2
141,860	+		Dshi_3734	0.70	+0.0
141,873	-		Dshi_3734	0.71	-0.6
141,879	-		Dshi_3734	0.72	+0.2
141,897	+		Dshi_3734	0.74	-0.1
141,897	+		Dshi_3734	0.74	-0.3
141,910	-		Dshi_3734	0.76	-1.2
141,919	+		Dshi_3734	0.77	-0.3
141,919	+		Dshi_3734	0.77	-0.0
141,927	-		Dshi_3734	0.78	+0.5
141,927	-		Dshi_3734	0.78	+0.8
141,927	-		Dshi_3734	0.78	+0.8
141,958	-		Dshi_3734	0.81	-0.5
141,981	-		Dshi_3734	0.84	-0.4
141,985	+		Dshi_3734	0.84	-0.3
141,985	+		Dshi_3734	0.84	-0.1
141,993	-		Dshi_3734	0.85	-1.3
141,993	-		Dshi_3734	0.85	+0.6
141,993	-		Dshi_3734	0.85	-1.5
141,995	+		Dshi_3734	0.85	-0.6
141,998	-		Dshi_3734	0.86	+0.3
142,008	-		Dshi_3734	0.87	-0.6
142,008	-		Dshi_3734	0.87	+1.0
142,008	-		Dshi_3734	0.87	+0.0
142,017	+		Dshi_3734	0.88	-0.9
142,017	-		Dshi_3734	0.88	+1.0
142,022	+		Dshi_3734	0.89	-1.2
142,022	+		Dshi_3734	0.89	-0.2
142,022	+		Dshi_3734	0.89	+0.3
142,022	+		Dshi_3734	0.89	+0.3
142,022	+		Dshi_3734	0.89	-1.2
142,025	-		Dshi_3734	0.89	+0.9
142,025	-		Dshi_3734	0.89	-0.0
142,030	-		Dshi_3734	0.90	+0.1
142,030	-		Dshi_3734	0.90	+0.1
142,030	-		Dshi_3734	0.90	-0.2
142,030	-		Dshi_3734	0.90	-0.1
142,030	-		Dshi_3734	0.90	-0.4
142,031	+		Dshi_3734	0.90	-0.7
142,032	+		Dshi_3734	0.90	+0.3
142,032	+		Dshi_3734	0.90	+2.3
142,032	+		Dshi_3734	0.90	-1.0
142,032	+		Dshi_3734	0.90	+0.3
142,032	+		Dshi_3734	0.90	-0.5
142,032	+		Dshi_3734	0.90	-1.9
142,032	+		Dshi_3734	0.90	-0.6
142,032	+		Dshi_3734	0.90	+0.2
142,032	+		Dshi_3734	0.90	+1.4
142,032	+		Dshi_3734	0.90	-0.2
142,032	+		Dshi_3734	0.90	-0.4
142,032	+		Dshi_3734	0.90	-0.4
142,032	+		Dshi_3734	0.90	-0.2
142,032	+		Dshi_3734	0.90	+0.5
142,032	+		Dshi_3734	0.90	-1.2
142,032	+		Dshi_3734	0.90	+0.1
142,032	+		Dshi_3734	0.90	-0.9
142,032	+		Dshi_3734	0.90	-2.2
142,032	+		Dshi_3734	0.90	+0.2
142,032	+		Dshi_3734	0.90	-1.2
142,032	+		Dshi_3734	0.90	-0.3
142,032	+		Dshi_3734	0.90	-0.0
142,032	+		Dshi_3734	0.90	+0.5
142,032	+		Dshi_3734	0.90	-0.6
142,032	+		Dshi_3734	0.90	+0.9
142,032	+		Dshi_3734	0.90	-0.3
142,032	+		Dshi_3734	0.90	+1.9
142,032	+		Dshi_3734	0.90	-0.5
142,032	+		Dshi_3734	0.90	+0.0
142,032	+		Dshi_3734	0.90	+1.1
142,032	+		Dshi_3734	0.90	+0.2
142,032	+		Dshi_3734	0.90	-0.1
142,032	+		Dshi_3734	0.90	-0.1
142,032	+		Dshi_3734	0.90	-1.6
142,032	+		Dshi_3734	0.90	-0.5
142,032	+		Dshi_3734	0.90	+0.4
142,032	+		Dshi_3734	0.90	-1.2
142,032	+		Dshi_3734	0.90	+0.3
142,032	+		Dshi_3734	0.90	+1.3
142,032	+		Dshi_3734	0.90	+0.8
142,032	+		Dshi_3734	0.90	-0.5
142,032	+		Dshi_3734	0.90	-0.1
142,032	+		Dshi_3734	0.90	+0.5
142,032	+		Dshi_3734	0.90	+0.7
142,032	+		Dshi_3734	0.90	+0.3
142,032	+		Dshi_3734	0.90	+0.3
142,032	+		Dshi_3734	0.90	+0.0
142,032	+		Dshi_3734	0.90	-0.9
142,032	+		Dshi_3734	0.90	+0.3
142,032	+		Dshi_3734	0.90	+1.0
142,032	+		Dshi_3734	0.90	-0.5
142,032	+		Dshi_3734	0.90	-0.6
142,032	+		Dshi_3734	0.90	-0.3
142,032	+		Dshi_3734	0.90	+0.3
142,032	+		Dshi_3734	0.90	+0.3
142,032	+		Dshi_3734	0.90	-0.1
142,032	+		Dshi_3734	0.90	-0.7
142,032	+		Dshi_3734	0.90	-0.4
142,032	+		Dshi_3734	0.90	+0.1
142,035	-				+0.5
142,035	-				+0.3
142,040	-				+0.0
142,040	-				-0.3
142,040	-				+0.4
142,040	-				+0.1
142,040	-				-0.5
142,040	-				-0.0
142,040	-				+0.2
142,040	-				+0.8
142,040	-				-0.8
142,040	-				-0.0
142,040	-				+0.1
142,040	-				-0.0
142,040	-				-2.3
142,040	-				+0.3
142,040	-				-1.7
142,040	-				-0.2
142,040	-				+0.4
142,040	-				-0.6
142,040	-				-1.3
142,040	-				-0.4
142,040	-				-0.6
142,040	-				+0.5
142,040	-				+0.5
142,040	-				+1.1
142,040	-				+0.0
142,040	-				-0.2
142,040	-				-0.4
142,040	-				-0.1
142,040	-				-0.2
142,040	-				+0.4
142,040	-				+0.3
142,040	-				-1.2
142,040	-				-0.1
142,040	-				-0.3
142,040	-				-2.9
142,040	-				-1.1
142,040	-				-0.3
142,040	-				-0.9
142,040	-				+0.5
142,042	+				+0.4
142,042	+				+0.6
142,042	+				-0.3
142,048	+				-0.4
142,050	-				+0.4
142,050	-				-0.5
142,050	-				-1.7
142,050	-				-0.9
142,056	+				-0.9
142,056	-				-1.6
142,070	+				+1.8
142,080	+				-0.3
142,116	+				-0.6
142,146	+				-0.8
142,154	-				-0.1
142,159	+				+1.1
142,167	-				-0.3
142,168	+				-0.4
142,168	+				+0.2
142,168	+				+0.4
142,168	+				-0.1
142,168	+				-0.5
142,169	+				-0.3
142,176	-				-0.8
142,176	-				+0.8
142,176	-				+0.3
142,176	-				-0.3
142,176	-				+0.3
142,176	-				+0.1
142,214	-				-0.3
142,227	+				+0.3
142,242	+				+0.3
142,245	-				-0.8
142,245	-				-1.1
142,245	-				-0.2
142,250	-				-0.4
142,250	-				-1.1
142,250	-				+0.9
142,250	-				-0.9
142,250	-				+0.1
142,250	-				+2.4
142,250	-				+0.7
142,252	+				+0.0
142,252	+				-0.3
142,252	+				+0.2
142,254	+				-1.2
142,254	+				-0.5
142,254	+				+0.2
142,254	+				-1.5
142,254	+				+0.1
142,254	+				+0.6
142,254	+				+0.5
142,254	+				+1.1
142,260	-				+0.4
142,262	-				+0.6
142,262	-				-1.1
142,262	-				+0.6
142,262	-				+0.1
142,270	-				+0.3
142,297	-				+1.0
142,314	-				+1.6
142,336	-				-0.9
142,341	-				-0.5
142,342	-				-0.6
142,343	-				-0.8
143,639	+				+0.5
143,646	-				+0.6
143,646	-				-0.0
143,687	+				+0.6
143,689	+				-0.1
143,701	+				-0.1
143,702	+				-1.4
143,712	+				-1.1
143,712	+				-0.5
143,712	+				-0.9
143,712	+				-1.1
143,712	+				+0.0
143,712	+				-0.0
143,712	+				+0.0
143,712	+				-0.0
143,712	+				-0.5
143,712	+				+0.2
143,712	+				+0.0
143,712	+				-1.1
143,712	+				-0.2
143,712	+				+0.1
143,712	+				-0.4
143,712	+				-0.5
143,712	+				+0.3
143,712	+				-0.7
143,712	+				+0.1
143,712	+				+0.7
143,714	+				-0.5
143,720	-				-0.3
143,720	-				-0.3
143,720	-				-0.8
143,720	-				-1.0
143,720	-				-0.4
143,720	-				+0.7
143,720	-				-2.8
143,720	-				+0.0
143,720	-				-0.8
143,720	-				+0.2
143,720	-				-0.2
143,722	-				-0.9
143,789	-				-0.5
143,799	+				-0.8
143,800	+				-0.2
143,808	-				+0.1
143,808	-				+1.3
143,860	+				+0.3
143,861	+				-0.1
143,861	+				-0.7
143,863	-				-0.1
143,876	-				+0.1
143,879	+				-0.2
143,884	+				+0.2
143,884	+				+0.0
143,903	+				-2.2
143,903	+				-0.1
143,903	+				+0.2
143,903	+				-0.9
143,911	-				-0.2
143,936	+				+0.9
143,941	+				+0.4
143,941	+				-0.2
143,941	+				+1.2
143,949	-				+0.0
143,949	-				-0.1
143,949	-				-0.2
143,971	+				-0.5
143,986	-				+0.6
143,988	+				-1.8
143,996	+				-0.4
143,996	-				-0.7
144,004	-				-0.5
144,067	+		Dshi_3738	0.13	-0.3
144,075	-		Dshi_3738	0.13	-0.3
144,075	-		Dshi_3738	0.13	-1.5
144,093	-		Dshi_3738	0.15	+0.4
144,098	-		Dshi_3738	0.15	+0.6
144,121	+		Dshi_3738	0.17	+0.7
144,162	-		Dshi_3738	0.20	-1.7
144,168	-		Dshi_3738	0.20	-0.4
144,221	-		Dshi_3738	0.24	+0.3
144,226	+		Dshi_3738	0.24	-1.0
144,231	-		Dshi_3738	0.25	+0.8
144,236	-		Dshi_3738	0.25	-0.4