Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3450

Experiment: L-Rhamnose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Rhamnose (C)
3,631,179	+		Dshi_3448	0.74	-2.3
3,631,185	+		Dshi_3448	0.75	-1.4
3,631,228	+		Dshi_3448	0.81	+0.4
3,631,299	+				+0.0
3,631,364	+				-0.5
3,631,367	-				+0.7
3,631,369	+				-0.1
3,631,369	-				-0.3
3,631,377	-				-0.7
3,631,379	+				-0.4
3,631,379	+				-1.1
3,631,387	-				+0.1
3,631,387	-				+1.3
3,632,756	+				+0.4
3,632,801	+				+0.1
3,632,801	+				+0.1
3,632,801	+				-1.8
3,632,801	+				+0.4
3,632,801	+				-0.6
3,632,801	+				-0.4
3,632,801	+				-2.5
3,632,801	+				-0.2
3,632,801	+				+0.2
3,632,801	+				-0.4
3,632,801	+				-0.8
3,632,809	-				-1.0
3,632,809	-				-1.4
3,632,809	-				-0.7
3,632,809	-				-0.9
3,632,809	-				+0.1
3,632,819	-				+0.0
3,632,835	+				-0.2
3,632,835	+				-0.3
3,632,835	+				+0.1
3,632,835	+				+0.4
3,632,835	+				-0.8
3,632,843	-		Dshi_3451	0.11	+1.1
3,632,850	+		Dshi_3451	0.12	-1.7
3,632,857	+		Dshi_3451	0.13	-0.8
3,632,857	+		Dshi_3451	0.13	-0.1
3,632,857	+		Dshi_3451	0.13	+0.4
3,632,857	+		Dshi_3451	0.13	-0.2
3,632,857	+		Dshi_3451	0.13	+1.0
3,632,857	+		Dshi_3451	0.13	+0.2
3,632,857	+		Dshi_3451	0.13	+2.3
3,632,857	+		Dshi_3451	0.13	+0.3
3,632,857	+		Dshi_3451	0.13	+1.3
3,632,857	+		Dshi_3451	0.13	+1.4
3,632,857	+		Dshi_3451	0.13	-0.8
3,632,857	+		Dshi_3451	0.13	+0.1
3,632,864	-		Dshi_3451	0.14	-0.2
3,632,864	-		Dshi_3451	0.14	-0.8
3,632,865	-		Dshi_3451	0.15	+0.8
3,632,865	-		Dshi_3451	0.15	-0.6
3,632,865	-		Dshi_3451	0.15	+1.3
3,632,865	-		Dshi_3451	0.15	-0.1
3,632,865	-		Dshi_3451	0.15	+0.3
3,632,865	-		Dshi_3451	0.15	+0.6
3,632,865	-		Dshi_3451	0.15	+0.3
3,632,865	-		Dshi_3451	0.15	+0.6
3,632,865	-		Dshi_3451	0.15	+0.7
3,632,865	-		Dshi_3451	0.15	+0.2
3,632,865	-		Dshi_3451	0.15	-1.4
3,632,865	-		Dshi_3451	0.15	-0.9
3,632,865	-		Dshi_3451	0.15	-0.6
3,632,871	+		Dshi_3451	0.16	-1.6
3,632,882	+		Dshi_3451	0.17	-0.3
3,632,890	+		Dshi_3451	0.19	+0.8
3,632,890	+		Dshi_3451	0.19	-0.0
3,632,890	+		Dshi_3451	0.19	+0.0
3,632,891	-		Dshi_3451	0.19	-0.5
3,632,892	-		Dshi_3451	0.19	-1.0
3,632,898	-		Dshi_3451	0.20	+0.4
3,632,904	+		Dshi_3451	0.21	-0.1
3,632,904	+		Dshi_3451	0.21	-0.2
3,632,904	+		Dshi_3451	0.21	-0.4
3,632,904	+		Dshi_3451	0.21	+1.0
3,632,904	+		Dshi_3451	0.21	+0.6
3,632,906	+		Dshi_3451	0.21	-0.0
3,632,912	-		Dshi_3451	0.22	-1.8
3,632,912	-		Dshi_3451	0.22	-1.7
3,632,912	-		Dshi_3451	0.22	-0.5
3,632,912	-		Dshi_3451	0.22	+0.5
3,632,913	+		Dshi_3451	0.23	-0.5
3,632,918	+		Dshi_3451	0.23	-2.0
3,632,918	+		Dshi_3451	0.23	-0.3
3,632,918	+		Dshi_3451	0.23	+1.0
3,632,918	+		Dshi_3451	0.23	-0.7
3,632,926	-		Dshi_3451	0.25	+0.4
3,632,926	-		Dshi_3451	0.25	+0.6
3,632,926	-		Dshi_3451	0.25	-1.3
3,632,926	-		Dshi_3451	0.25	+1.1
3,632,926	-		Dshi_3451	0.25	+0.5
3,632,942	+		Dshi_3451	0.27	+1.3
3,632,942	+		Dshi_3451	0.27	+0.0
3,632,942	+		Dshi_3451	0.27	+1.3
3,632,944	+		Dshi_3451	0.28	+2.0
3,632,950	-		Dshi_3451	0.29	-0.5
3,632,952	-		Dshi_3451	0.29	+1.4
3,632,957	-		Dshi_3451	0.30	+1.6
3,632,957	-		Dshi_3451	0.30	+0.6
3,632,965	+		Dshi_3451	0.31	+0.1
3,632,968	-		Dshi_3451	0.32	+0.2
3,632,968	-		Dshi_3451	0.32	+0.0
3,632,968	-		Dshi_3451	0.32	-0.1
3,632,968	-		Dshi_3451	0.32	+0.6
3,633,003	-		Dshi_3451	0.38	+0.7
3,633,003	-		Dshi_3451	0.38	-0.3
3,633,015	-		Dshi_3451	0.40	-1.1
3,633,033	+		Dshi_3451	0.43	-1.5
3,633,036	-		Dshi_3451	0.43	+0.0
3,633,041	-		Dshi_3451	0.44	-0.2
3,633,051	-		Dshi_3451	0.46	-1.7
3,633,060	+		Dshi_3451	0.47	+0.5
3,633,062	-		Dshi_3451	0.48	-0.4
3,633,065	+		Dshi_3451	0.48	+1.8
3,633,090	+		Dshi_3451	0.52	-0.0
3,633,107	+		Dshi_3451	0.55	-0.9
3,633,107	+		Dshi_3451	0.55	-0.5
3,633,112	+		Dshi_3451	0.56	+0.9
3,633,117	+		Dshi_3451	0.57	+0.6
3,633,117	+		Dshi_3451	0.57	+0.3
3,633,120	-		Dshi_3451	0.57	+1.2
3,633,120	-		Dshi_3451	0.57	-1.2
3,633,120	-		Dshi_3451	0.57	+1.8
3,633,120	-		Dshi_3451	0.57	-2.4
3,633,126	-		Dshi_3451	0.58	+0.3
3,633,130	-		Dshi_3451	0.59	-0.4
3,633,144	+		Dshi_3451	0.61	-0.8
3,633,149	+		Dshi_3451	0.62	-0.3
3,633,149	+		Dshi_3451	0.62	+0.7
3,633,149	+		Dshi_3451	0.62	+0.1
3,633,149	+		Dshi_3451	0.62	+1.0
3,633,149	+		Dshi_3451	0.62	-0.7
3,633,149	+		Dshi_3451	0.62	-0.3
3,633,149	+		Dshi_3451	0.62	-0.0
3,633,149	+		Dshi_3451	0.62	-0.9
3,633,152	-		Dshi_3451	0.63	-1.2
3,633,157	-		Dshi_3451	0.63	+0.5
3,633,157	-		Dshi_3451	0.63	-0.2
3,633,157	-		Dshi_3451	0.63	+0.8
3,633,157	-		Dshi_3451	0.63	-0.4
3,633,157	-		Dshi_3451	0.63	-2.2
3,633,157	-		Dshi_3451	0.63	-1.2
3,633,157	-		Dshi_3451	0.63	-1.5
3,633,157	-		Dshi_3451	0.63	+0.5
3,633,157	-		Dshi_3451	0.63	+0.3
3,633,157	-		Dshi_3451	0.63	-1.4
3,633,157	-		Dshi_3451	0.63	-0.3
3,633,157	-		Dshi_3451	0.63	-0.4
3,633,157	-		Dshi_3451	0.63	-1.5
3,633,157	-		Dshi_3451	0.63	+2.0
3,633,157	-		Dshi_3451	0.63	-2.2
3,633,168	+		Dshi_3451	0.65	+2.4
3,633,170	+		Dshi_3451	0.66	+0.7
3,633,170	+		Dshi_3451	0.66	+0.0
3,633,175	+		Dshi_3451	0.66	+0.6
3,633,175	+		Dshi_3451	0.66	+1.3
3,633,178	-		Dshi_3451	0.67	-0.5
3,633,207	-		Dshi_3451	0.72	-0.6
3,633,207	-		Dshi_3451	0.72	+0.6
3,633,209	+		Dshi_3451	0.72	+0.2
3,633,217	-		Dshi_3451	0.74	+0.3
3,633,231	-		Dshi_3451	0.76	-0.2
3,633,244	+		Dshi_3451	0.78	+0.8
3,633,244	-		Dshi_3451	0.78	-2.3
3,633,249	+		Dshi_3451	0.79	-0.7
3,633,255	+		Dshi_3451	0.80	-1.5
3,633,257	+		Dshi_3451	0.80	-0.2
3,633,259	+		Dshi_3451	0.81	+0.4
3,633,263	+		Dshi_3451	0.81	-0.7
3,633,265	-		Dshi_3451	0.82	-0.7
3,633,283	+		Dshi_3451	0.85	-0.6
3,633,289	+		Dshi_3451	0.86	+0.5
3,633,306	+		Dshi_3451	0.88	+0.7
3,633,311	+		Dshi_3451	0.89	-1.1
3,633,311	+		Dshi_3451	0.89	-2.0
3,633,316	+				+0.4
3,633,329	+				-0.0
3,633,368	+				-3.3
3,633,375	+				-0.0
3,633,378	+				+1.1
3,633,380	+				-0.6
3,633,380	+				-0.3
3,633,380	+				-0.4
3,633,385	+				+0.3
3,633,392	+				-0.1
3,633,392	+				+0.1
3,633,392	+				-0.4
3,633,392	+				+0.7
3,633,392	+				+1.2
3,633,392	+				-0.7
3,633,392	+				-1.3
3,633,392	+				+0.1
3,633,392	+				-0.5
3,633,392	+				+0.3
3,633,392	+				+0.4
3,633,392	+				+0.7
3,633,396	-				-0.2
3,633,400	-				+0.8
3,633,418	+				-1.7
3,633,426	+				-1.0
3,633,456	+				-0.2
3,633,462	+				-0.4
3,633,738	+				+0.0
3,633,743	+				-0.5
3,633,751	-				-0.5