Strain Fitness in Shewanella amazonensis SB2B around Sama_3461

Experiment: casaminos (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (N)
4,089,958	+		Sama_3460	0.43	+0.0
4,089,958	+		Sama_3460	0.43	+0.4
4,089,958	+		Sama_3460	0.43	-0.1
4,089,958	+		Sama_3460	0.43	-0.9
4,089,958	+		Sama_3460	0.43	-1.2
4,089,959	-		Sama_3460	0.43	+0.9
4,089,959	-		Sama_3460	0.43	-0.6
4,090,032	+		Sama_3460	0.47	-0.8
4,090,039	+		Sama_3460	0.48	+0.9
4,090,040	-		Sama_3460	0.48	-1.6
4,090,040	-		Sama_3460	0.48	-2.2
4,090,104	+		Sama_3460	0.51	-1.8
4,090,104	+		Sama_3460	0.51	-1.0
4,090,104	+		Sama_3460	0.51	+0.0
4,090,105	-		Sama_3460	0.51	-1.9
4,090,105	-		Sama_3460	0.51	-2.4
4,090,105	-		Sama_3460	0.51	-0.9
4,090,134	+		Sama_3460	0.53	-0.9
4,090,135	-		Sama_3460	0.53	-1.3
4,090,142	+		Sama_3460	0.54	+0.3
4,090,142	+		Sama_3460	0.54	+0.1
4,090,142	+		Sama_3460	0.54	-0.6
4,090,142	+		Sama_3460	0.54	-0.5
4,090,143	-		Sama_3460	0.54	-0.3
4,090,143	-		Sama_3460	0.54	-0.1
4,090,169	+		Sama_3460	0.55	-0.2
4,090,169	+		Sama_3460	0.55	+1.7
4,090,169	+		Sama_3460	0.55	+0.4
4,090,169	+		Sama_3460	0.55	-2.8
4,090,169	+		Sama_3460	0.55	-0.9
4,090,169	+		Sama_3460	0.55	-1.9
4,090,169	+		Sama_3460	0.55	-0.0
4,090,170	-		Sama_3460	0.55	+1.4
4,090,179	+		Sama_3460	0.56	+1.2
4,090,179	+		Sama_3460	0.56	-2.0
4,090,180	-		Sama_3460	0.56	-1.1
4,090,180	-		Sama_3460	0.56	-0.6
4,090,180	-		Sama_3460	0.56	+0.6
4,090,180	-		Sama_3460	0.56	-0.8
4,090,180	-		Sama_3460	0.56	-0.6
4,090,180	-		Sama_3460	0.56	-1.7
4,090,180	-		Sama_3460	0.56	-0.6
4,090,180	-		Sama_3460	0.56	+1.7
4,090,182	+		Sama_3460	0.56	-0.0
4,090,183	-		Sama_3460	0.56	-1.3
4,090,303	+		Sama_3460	0.63	-0.3
4,090,303	+		Sama_3460	0.63	-1.3
4,090,336	+		Sama_3460	0.65	-0.1
4,090,345	+		Sama_3460	0.65	-0.8
4,090,345	+		Sama_3460	0.65	-0.6
4,090,345	+		Sama_3460	0.65	+0.5
4,090,345	+		Sama_3460	0.65	+0.8
4,090,345	+		Sama_3460	0.65	-1.2
4,090,345	+		Sama_3460	0.65	-0.6
4,090,345	+		Sama_3460	0.65	-0.0
4,090,345	+		Sama_3460	0.65	+1.1
4,090,346	-		Sama_3460	0.65	-1.0
4,090,346	-		Sama_3460	0.65	-1.4
4,090,346	-		Sama_3460	0.65	-0.8
4,090,346	-		Sama_3460	0.65	-0.4
4,090,346	-		Sama_3460	0.65	-1.2
4,090,346	-		Sama_3460	0.65	-0.2
4,090,346	-		Sama_3460	0.65	-0.6
4,090,346	-		Sama_3460	0.65	-1.2
4,090,346	-		Sama_3460	0.65	+0.1
4,090,346	-		Sama_3460	0.65	+1.3
4,090,346	-		Sama_3460	0.65	-0.4
4,090,378	+		Sama_3460	0.67	-2.4
4,090,378	+		Sama_3460	0.67	-1.1
4,090,402	+		Sama_3460	0.69	-0.5
4,090,451	+		Sama_3460	0.72	-0.5
4,090,451	+		Sama_3460	0.72	+0.0
4,090,451	+		Sama_3460	0.72	-0.6
4,090,452	-		Sama_3460	0.72	-1.8
4,090,456	+		Sama_3460	0.72	-0.3
4,090,456	+		Sama_3460	0.72	-1.3
4,090,456	+		Sama_3460	0.72	-0.8
4,090,456	+		Sama_3460	0.72	-0.7
4,090,456	+		Sama_3460	0.72	-0.2
4,090,456	+		Sama_3460	0.72	-1.3
4,090,456	+		Sama_3460	0.72	+0.0
4,090,457	-		Sama_3460	0.72	+0.3
4,090,457	-		Sama_3460	0.72	-0.1
4,090,457	-		Sama_3460	0.72	+0.2
4,090,457	-		Sama_3460	0.72	-0.9
4,090,457	-		Sama_3460	0.72	-0.3
4,090,457	-		Sama_3460	0.72	+0.5
4,090,457	-		Sama_3460	0.72	-0.5
4,090,457	-		Sama_3460	0.72	-1.0
4,090,457	-		Sama_3460	0.72	-2.3
4,090,490	-		Sama_3460	0.74	-1.3
4,090,490	-		Sama_3460	0.74	+0.2
4,090,490	-		Sama_3460	0.74	-0.8
4,090,493	+		Sama_3460	0.74	+0.2
4,090,493	+		Sama_3460	0.74	-0.5
4,090,493	+		Sama_3460	0.74	-0.5
4,090,493	+		Sama_3460	0.74	-2.0
4,090,493	+		Sama_3460	0.74	-0.7
4,090,493	+		Sama_3460	0.74	-1.4
4,090,493	+		Sama_3460	0.74	-0.0
4,090,493	+		Sama_3460	0.74	+0.3
4,090,494	-		Sama_3460	0.74	-0.9
4,090,494	-		Sama_3460	0.74	-0.1
4,090,494	-		Sama_3460	0.74	+0.2
4,090,494	-		Sama_3460	0.74	-1.2
4,090,494	-		Sama_3460	0.74	-1.2
4,090,494	-		Sama_3460	0.74	-1.6
4,090,494	-		Sama_3460	0.74	-0.8
4,090,495	+		Sama_3460	0.74	+1.0
4,090,495	+		Sama_3460	0.74	+0.0
4,090,495	+		Sama_3460	0.74	-1.6
4,090,496	-		Sama_3460	0.74	-1.1
4,090,496	-		Sama_3460	0.74	-0.4
4,090,528	+		Sama_3460	0.76	-0.2
4,090,529	-		Sama_3460	0.76	-0.7
4,090,529	-		Sama_3460	0.76	-1.0
4,090,558	+		Sama_3460	0.78	-2.0
4,090,656	+		Sama_3460	0.83	-1.2
4,090,656	+		Sama_3460	0.83	-0.9
4,090,656	+		Sama_3460	0.83	+0.7
4,090,656	+		Sama_3460	0.83	-2.4
4,090,656	+		Sama_3460	0.83	-0.3
4,090,656	+		Sama_3460	0.83	-1.1
4,090,656	+		Sama_3460	0.83	-1.3
4,090,656	+		Sama_3460	0.83	-1.5
4,090,656	+		Sama_3460	0.83	-1.0
4,090,657	-		Sama_3460	0.84	-0.4
4,090,657	-		Sama_3460	0.84	-1.1
4,090,657	-		Sama_3460	0.84	-1.2
4,090,657	-		Sama_3460	0.84	-1.1
4,090,657	-		Sama_3460	0.84	-0.1
4,090,657	-		Sama_3460	0.84	-0.6
4,090,657	-		Sama_3460	0.84	-0.8
4,090,657	-		Sama_3460	0.84	+0.4
4,090,657	-		Sama_3460	0.84	-0.8
4,090,657	-		Sama_3460	0.84	-0.2
4,090,657	-		Sama_3460	0.84	-1.4
4,090,657	-		Sama_3460	0.84	+0.5
4,090,657	-		Sama_3460	0.84	-0.2
4,090,657	-		Sama_3460	0.84	-1.1
4,090,733	+		Sama_3460	0.88	-0.6
4,090,733	+		Sama_3460	0.88	-1.4
4,090,734	-		Sama_3460	0.88	-1.3
4,090,734	-		Sama_3460	0.88	-0.9
4,090,734	-		Sama_3460	0.88	+0.8
4,090,807	+				-1.0
4,090,807	+				-0.5
4,090,807	+				+0.7
4,090,807	+				-1.1
4,090,807	+				+0.4
4,090,808	-				-1.7
4,090,808	-				-2.9
4,090,808	-				-1.9
4,090,820	-				-1.3
4,090,830	-				-1.3
4,090,897	+				-1.5
4,090,898	-				-1.1
4,090,905	+				-0.6
4,090,905	+				-2.0
4,090,958	+				+0.3
4,090,958	+				+0.3
4,090,958	+				-2.9
4,090,958	+				-0.7
4,090,958	+				-0.4
4,090,958	+				+0.3
4,090,958	+				+0.5
4,090,958	+				-0.5
4,090,958	+				-0.5
4,090,958	+				-0.4
4,090,958	+				-1.0
4,090,958	+				-0.4
4,090,959	-				-0.0
4,090,959	-				-0.6
4,090,959	-				+0.2
4,090,959	-				-1.5
4,090,959	-				-1.2
4,090,959	-				-0.3
4,090,959	-				+0.2
4,090,959	-				-1.0
4,090,959	-				-0.2
4,090,992	+				-0.3
4,090,992	+				-0.1
4,090,992	+				-0.9
4,090,992	+				-0.9
4,090,993	-				+0.5
4,091,085	+		Sama_3461	0.20	-0.2
4,091,086	-		Sama_3461	0.20	-1.5
4,091,117	+		Sama_3461	0.24	-0.5
4,091,117	+		Sama_3461	0.24	+0.0
4,091,117	+		Sama_3461	0.24	+0.3
4,091,117	+		Sama_3461	0.24	-0.9
4,091,118	-		Sama_3461	0.24	+0.4
4,091,136	+		Sama_3461	0.26	-0.2
4,091,137	-		Sama_3461	0.26	-1.2
4,091,198	-		Sama_3461	0.33	-0.1
4,091,399	+		Sama_3461	0.57	-0.8
4,091,399	+		Sama_3461	0.57	+0.9
4,091,399	+		Sama_3461	0.57	-0.3
4,091,399	+		Sama_3461	0.57	-0.0
4,091,399	+		Sama_3461	0.57	-0.8
4,091,439	-		Sama_3461	0.62	-1.1
4,091,439	-		Sama_3461	0.62	-2.1
4,091,494	+		Sama_3461	0.69	-0.5
4,091,494	+		Sama_3461	0.69	-0.5
4,091,494	+		Sama_3461	0.69	-1.0
4,091,494	+		Sama_3461	0.69	-0.9
4,091,494	+		Sama_3461	0.69	-0.7
4,091,495	-		Sama_3461	0.69	-0.5
4,091,495	-		Sama_3461	0.69	+0.1
4,091,495	-		Sama_3461	0.69	+0.0
4,091,495	-		Sama_3461	0.69	-0.4
4,091,495	-		Sama_3461	0.69	-1.2
4,091,495	-		Sama_3461	0.69	-1.2
4,091,495	-		Sama_3461	0.69	+0.1
4,091,495	-		Sama_3461	0.69	-0.1
4,091,495	-		Sama_3461	0.69	-0.4
4,091,495	-		Sama_3461	0.69	-0.3
4,091,495	-		Sama_3461	0.69	-1.7
4,091,495	-		Sama_3461	0.69	+0.2
4,091,495	-		Sama_3461	0.69	-0.3
4,091,495	-		Sama_3461	0.69	+0.4
4,091,495	-		Sama_3461	0.69	-0.2
4,091,495	-		Sama_3461	0.69	+0.5
4,091,495	-		Sama_3461	0.69	+0.3
4,091,495	-		Sama_3461	0.69	-0.4
4,091,495	-		Sama_3461	0.69	-1.3
4,091,538	-		Sama_3461	0.74	-1.2
4,091,569	+		Sama_3461	0.78	-1.9
4,091,569	+		Sama_3461	0.78	+1.1
4,091,570	-		Sama_3461	0.78	-0.2
4,091,639	+		Sama_3461	0.86	-0.2
4,091,639	+		Sama_3461	0.86	-2.2
4,091,639	+		Sama_3461	0.86	-1.7
4,091,639	+		Sama_3461	0.86	-0.4
4,091,639	+		Sama_3461	0.86	-0.1
4,091,639	+		Sama_3461	0.86	-1.6
4,091,639	+		Sama_3461	0.86	-0.9
4,091,639	+		Sama_3461	0.86	-1.9
4,091,640	-		Sama_3461	0.86	-1.1
4,091,640	-		Sama_3461	0.86	-0.2
4,091,640	-		Sama_3461	0.86	-0.5
4,091,640	-		Sama_3461	0.86	+0.0
4,091,640	-		Sama_3461	0.86	+0.1
4,091,640	-		Sama_3461	0.86	-0.1
4,091,640	-		Sama_3461	0.86	-1.3
4,091,640	-		Sama_3461	0.86	-1.0
4,091,640	-		Sama_3461	0.86	-0.3
4,091,640	-		Sama_3461	0.86	-0.1
4,091,640	-		Sama_3461	0.86	+0.0
4,091,640	-		Sama_3461	0.86	-1.1
4,091,640	-		Sama_3461	0.86	+0.2
4,091,640	-		Sama_3461	0.86	-0.0
4,091,640	-		Sama_3461	0.86	-0.4
4,091,640	-		Sama_3461	0.86	-0.1
4,091,641	+		Sama_3461	0.86	+1.0
4,091,641	+		Sama_3461	0.86	-1.4
4,091,641	+		Sama_3461	0.86	+1.1
4,091,641	+		Sama_3461	0.86	-1.0
4,091,643	+		Sama_3461	0.87	+0.0
4,091,643	+		Sama_3461	0.87	+0.2
4,091,643	+		Sama_3461	0.87	+0.7
4,091,643	+		Sama_3461	0.87	+0.1
4,091,643	+		Sama_3461	0.87	-1.1
4,091,643	+		Sama_3461	0.87	-1.9
4,091,644	-		Sama_3461	0.87	-0.9
4,091,644	-		Sama_3461	0.87	-0.9
4,091,644	-		Sama_3461	0.87	-1.7
4,091,644	-		Sama_3461	0.87	-2.1
4,091,644	-		Sama_3461	0.87	-0.9
4,091,644	-		Sama_3461	0.87	+1.4
4,091,644	-		Sama_3461	0.87	+0.5
4,091,644	-		Sama_3461	0.87	-1.1
4,091,644	-		Sama_3461	0.87	-0.8
4,091,644	-		Sama_3461	0.87	+0.5
4,091,644	-		Sama_3461	0.87	+1.4
4,091,717	+				+0.2
4,091,717	+				-0.0
4,091,717	+				+1.1
4,091,717	+				-0.3
4,091,717	+				-0.2
4,091,717	+				+0.7
4,091,718	-				+0.1
4,091,771	+				-1.0
4,091,771	+				-0.1
4,091,772	-				+0.1
4,091,777	+				-0.5
4,091,812	+				+0.1
4,091,812	+				-0.3
4,091,813	-				-0.9
4,091,821	+				+0.2
4,091,821	+				-0.5
4,091,821	+				-1.7
4,091,821	+				-0.2
4,091,822	-				-0.5
4,091,822	-				-2.4
4,091,822	-				-0.6
4,091,822	-				-1.0
4,091,822	-				-1.1
4,091,824	+				-0.9
4,091,824	+				-0.5
4,091,824	+				-0.8
4,091,824	+				-0.0
4,091,824	+				+0.1
4,091,824	+				-0.8
4,091,824	+				-1.2
4,091,824	+				-0.2
4,091,825	-				-0.9
4,091,825	-				+0.1
4,091,825	-				-0.2
4,091,825	-				+0.5
4,091,825	-				+0.0
4,091,847	+				-0.2
4,091,848	-				+0.7
4,091,853	+				+0.0
4,091,853	+				+0.0
4,091,853	+				-0.4
4,091,853	+				-0.7
4,091,853	+				-1.5
4,091,853	+				-2.5
4,091,853	+				-2.5
4,091,854	-				+0.5
4,091,854	-				-1.1
4,091,854	-				-1.4
4,091,854	-				-0.8
4,091,854	-				-1.8
4,091,886	+		Sama_3462	0.13	-0.3
4,091,886	+		Sama_3462	0.13	-0.3
4,091,887	-		Sama_3462	0.13	-0.8
4,091,895	+		Sama_3462	0.13	-0.8
4,091,970	+		Sama_3462	0.20	-1.1
4,091,970	+		Sama_3462	0.20	-1.0
4,091,971	-		Sama_3462	0.20	-1.2
4,091,992	+		Sama_3462	0.22	-0.6
4,092,079	+		Sama_3462	0.30	-1.1
4,092,080	-		Sama_3462	0.30	-1.7
4,092,081	+		Sama_3462	0.30	-0.2
4,092,081	+		Sama_3462	0.30	-0.6
4,092,081	+		Sama_3462	0.30	-1.5
4,092,082	-		Sama_3462	0.30	-0.8
4,092,082	-		Sama_3462	0.30	-1.1
4,092,082	-		Sama_3462	0.30	+1.0
4,092,127	+		Sama_3462	0.34	+0.4
4,092,127	+		Sama_3462	0.34	-1.9
4,092,127	+		Sama_3462	0.34	-1.6
4,092,127	+		Sama_3462	0.34	-0.7
4,092,127	+		Sama_3462	0.34	+0.5
4,092,128	-		Sama_3462	0.35	-1.8
4,092,128	-		Sama_3462	0.35	-1.7
4,092,128	-		Sama_3462	0.35	+0.0
4,092,128	-		Sama_3462	0.35	-0.7
4,092,148	+		Sama_3462	0.36	-0.2
4,092,148	+		Sama_3462	0.36	-0.4
4,092,148	+		Sama_3462	0.36	+0.6
4,092,182	+		Sama_3462	0.39	-1.2
4,092,182	+		Sama_3462	0.39	-0.4
4,092,182	+		Sama_3462	0.39	+0.4
4,092,182	+		Sama_3462	0.39	+0.2
4,092,182	+		Sama_3462	0.39	+0.4
4,092,183	-		Sama_3462	0.39	-1.3
4,092,183	-		Sama_3462	0.39	-1.6
4,092,183	-		Sama_3462	0.39	-1.6
4,092,213	+		Sama_3462	0.42	-0.8
4,092,213	+		Sama_3462	0.42	-0.3
4,092,214	-		Sama_3462	0.42	-0.2
4,092,214	-		Sama_3462	0.42	-0.4
4,092,214	-		Sama_3462	0.42	-1.6
4,092,419	+		Sama_3462	0.61	-1.3
4,092,419	+		Sama_3462	0.61	+0.8
4,092,419	+		Sama_3462	0.61	-1.0
4,092,419	+		Sama_3462	0.61	-0.9
4,092,419	+		Sama_3462	0.61	+0.5
4,092,420	-		Sama_3462	0.61	+0.0
4,092,420	-		Sama_3462	0.61	-1.8
4,092,420	-		Sama_3462	0.61	+0.1
4,092,420	-		Sama_3462	0.61	-0.2
4,092,421	+		Sama_3462	0.61	+0.1
4,092,421	+		Sama_3462	0.61	+0.7
4,092,421	+		Sama_3462	0.61	-1.6
4,092,422	-		Sama_3462	0.61	-0.4
4,092,422	-		Sama_3462	0.61	-0.9
4,092,422	-		Sama_3462	0.61	-0.7
4,092,439	+		Sama_3462	0.63	-0.3
4,092,440	-		Sama_3462	0.63	+0.0
4,092,485	+		Sama_3462	0.67	-0.4
4,092,485	+		Sama_3462	0.67	-0.1
4,092,485	+		Sama_3462	0.67	-0.5
4,092,485	+		Sama_3462	0.67	-0.7
4,092,485	+		Sama_3462	0.67	-0.7
4,092,485	+		Sama_3462	0.67	+1.0
4,092,486	-		Sama_3462	0.67	-0.7
4,092,486	-		Sama_3462	0.67	-0.3
4,092,486	-		Sama_3462	0.67	-1.3
4,092,486	-		Sama_3462	0.67	-0.8
4,092,567	+		Sama_3462	0.74	-0.1
4,092,567	+		Sama_3462	0.74	-0.8
4,092,610	+		Sama_3462	0.78	-0.3
4,092,646	+		Sama_3462	0.81	-0.6
4,092,646	+		Sama_3462	0.81	-1.7
4,092,646	+		Sama_3462	0.81	-0.7
4,092,646	+		Sama_3462	0.81	-1.3
4,092,647	-		Sama_3462	0.82	-1.6
4,092,647	-		Sama_3462	0.82	+1.5
4,092,679	-		Sama_3462	0.84	+0.5
4,092,679	-		Sama_3462	0.84	-1.8
4,092,732	+		Sama_3462	0.89	-0.2
4,092,732	+		Sama_3462	0.89	-0.8
4,092,736	+		Sama_3462	0.90	-0.8
4,092,736	+		Sama_3462	0.90	-0.7
4,092,737	-		Sama_3462	0.90	-0.1
4,092,737	-		Sama_3462	0.90	-0.2
4,092,737	-		Sama_3462	0.90	-0.0
4,092,737	-		Sama_3462	0.90	-2.0
4,092,737	-		Sama_3462	0.90	+0.0