Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c09730

Experiment: m.b. syringaldehyde 1.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. syringaldehyde 1.25 mM
999,030	-		PGA1_c09720	0.49	+0.4
999,096	-		PGA1_c09720	0.53	-0.6
999,342	+		PGA1_c09720	0.68	-0.6
999,419	+		PGA1_c09720	0.73	+1.0
999,427	+		PGA1_c09720	0.73	-0.3
999,509	+		PGA1_c09720	0.78	-0.0
999,760	+				-2.7
999,765	+				-0.0
999,765	+				-0.1
999,773	-				-0.0
999,810	-				-0.5
999,825	+				-1.3
999,825	+				-0.8
999,833	-				-0.3
999,833	-				-1.6
999,957	+				+0.6
1,000,034	-				+0.5
1,000,095	+				+0.4
1,000,148	-				-0.8
1,000,211	+		PGA1_c09730	0.14	-0.0
1,000,229	-		PGA1_c09730	0.15	-2.5
1,000,229	-		PGA1_c09730	0.15	-1.3
1,000,234	-		PGA1_c09730	0.15	-1.5
1,000,236	-		PGA1_c09730	0.15	-2.5
1,000,290	-		PGA1_c09730	0.18	-0.0
1,000,301	-		PGA1_c09730	0.19	+1.3
1,000,379	+		PGA1_c09730	0.23	+1.2
1,000,421	-		PGA1_c09730	0.26	-1.2
1,000,424	+		PGA1_c09730	0.26	-2.5
1,000,424	+		PGA1_c09730	0.26	-0.1
1,000,424	+		PGA1_c09730	0.26	+0.3
1,000,424	+		PGA1_c09730	0.26	-0.6
1,000,522	+		PGA1_c09730	0.32	-0.5
1,000,522	-		PGA1_c09730	0.32	-1.8
1,000,530	-		PGA1_c09730	0.32	-1.2
1,000,629	-		PGA1_c09730	0.38	-0.8
1,000,629	-		PGA1_c09730	0.38	-1.1
1,000,708	-		PGA1_c09730	0.43	-0.5
1,000,726	+		PGA1_c09730	0.44	-0.2
1,000,754	+		PGA1_c09730	0.46	-0.2
1,000,787	+		PGA1_c09730	0.48	+0.2
1,000,792	+		PGA1_c09730	0.48	+0.3
1,000,800	-		PGA1_c09730	0.48	-1.1
1,000,944	-		PGA1_c09730	0.57	-0.8
1,000,970	+		PGA1_c09730	0.58	-2.7
1,001,012	-		PGA1_c09730	0.61	-0.9
1,001,012	-		PGA1_c09730	0.61	-0.0
1,001,083	+		PGA1_c09730	0.65	-0.9
1,001,144	+		PGA1_c09730	0.69	-1.1
1,001,144	+		PGA1_c09730	0.69	+0.5
1,001,152	+		PGA1_c09730	0.69	-0.5
1,001,152	+		PGA1_c09730	0.69	-0.7
1,001,188	+		PGA1_c09730	0.71	-2.0
1,001,191	+		PGA1_c09730	0.71	-1.9
1,001,199	-		PGA1_c09730	0.72	-2.5
1,001,199	-		PGA1_c09730	0.72	-1.7
1,001,201	-		PGA1_c09730	0.72	+0.4
1,001,225	+		PGA1_c09730	0.73	-2.2
1,001,225	+		PGA1_c09730	0.73	-2.8
1,001,225	+		PGA1_c09730	0.73	+1.3
1,001,233	-		PGA1_c09730	0.74	+0.2
1,001,233	-		PGA1_c09730	0.74	-1.6
1,001,233	-		PGA1_c09730	0.74	-1.1
1,001,368	+		PGA1_c09730	0.82	-3.1
1,001,375	+		PGA1_c09730	0.82	-0.3
1,001,383	-		PGA1_c09730	0.83	-1.6
1,001,600	+				+0.3
1,001,634	-				-1.6
1,001,634	-				-1.2
1,001,634	-				+0.6
1,001,643	+				-0.8
1,001,656	+				+0.8
1,001,662	+				-1.0
1,001,664	-				+0.5
1,001,669	+				-0.2
1,001,669	+				+0.5
1,001,669	+				+0.4
1,001,669	+				+0.2
1,001,670	-				-0.0
1,001,674	+				+0.6
1,001,674	+				-0.2
1,001,676	+				-0.6
1,001,676	+				-0.6
1,001,677	-				-0.7
1,001,677	-				-0.3
1,001,677	-				-0.8
1,001,677	-				-1.1
1,001,677	-				+0.6
1,001,682	-				-1.6
1,001,684	-				-0.1
1,001,684	-				+0.6
1,001,684	-				+0.6
1,001,684	-				+0.4
1,001,684	-				+0.4
1,001,684	-				+0.5
1,001,687	+				-0.9
1,001,692	+				+0.1
1,001,705	-				-0.8
1,001,720	+				+0.4
1,001,728	-				+0.9
1,001,728	-				-0.9
1,001,735	+				-0.9
1,001,735	+				-1.1
1,001,737	+				-0.6
1,001,812	+				-2.0
1,001,846	+				-1.1
1,001,854	-				-1.8
1,001,865	-				+1.4
1,001,898	+				+0.4
1,001,898	+				-0.0
1,001,898	-				-1.6
1,001,907	-				+0.4
1,001,909	+				-0.0
1,001,909	+				-1.2
1,001,913	+		PGA1_c09740	0.12	-0.7
1,001,917	-		PGA1_c09740	0.14	-2.0
1,001,917	-		PGA1_c09740	0.14	-0.8
1,001,918	+		PGA1_c09740	0.15	+0.3
1,001,918	+		PGA1_c09740	0.15	+1.3
1,001,919	+		PGA1_c09740	0.15	-1.2
1,001,919	+		PGA1_c09740	0.15	-0.5
1,001,919	+		PGA1_c09740	0.15	+0.8
1,001,919	+		PGA1_c09740	0.15	+0.9
1,001,920	+		PGA1_c09740	0.16	+0.6
1,001,920	+		PGA1_c09740	0.16	+1.4
1,001,926	+		PGA1_c09740	0.19	-0.1
1,001,926	-		PGA1_c09740	0.19	+0.3
1,001,926	-		PGA1_c09740	0.19	-1.5
1,001,926	-		PGA1_c09740	0.19	+0.3
1,001,927	-		PGA1_c09740	0.19	-1.7
1,001,927	-		PGA1_c09740	0.19	-0.6
1,001,927	-		PGA1_c09740	0.19	-0.8
1,001,927	-		PGA1_c09740	0.19	+0.2
1,001,927	-		PGA1_c09740	0.19	-0.2
1,001,927	-		PGA1_c09740	0.19	-2.7
1,001,928	-		PGA1_c09740	0.20	-0.6
1,001,928	-		PGA1_c09740	0.20	-0.0
1,001,928	-		PGA1_c09740	0.20	-0.2
1,001,928	-		PGA1_c09740	0.20	-1.2
1,001,928	-		PGA1_c09740	0.20	-3.0
1,001,931	+		PGA1_c09740	0.21	+0.9
1,001,931	+		PGA1_c09740	0.21	-1.9
1,001,936	-		PGA1_c09740	0.24	+0.1
1,001,939	+		PGA1_c09740	0.26	-2.5
1,001,939	+		PGA1_c09740	0.26	-0.2
1,001,939	+		PGA1_c09740	0.26	-0.7
1,001,939	+		PGA1_c09740	0.26	+0.1
1,001,939	+		PGA1_c09740	0.26	-0.3
1,001,939	-		PGA1_c09740	0.26	+0.5
1,001,939	-		PGA1_c09740	0.26	-0.5
1,001,947	-		PGA1_c09740	0.30	-1.8
1,001,947	-		PGA1_c09740	0.30	-0.1
1,001,947	-		PGA1_c09740	0.30	-1.7
1,001,947	-		PGA1_c09740	0.30	+0.1
1,001,947	-		PGA1_c09740	0.30	-0.0
1,001,947	-		PGA1_c09740	0.30	+0.1
1,001,963	+		PGA1_c09740	0.38	-0.9
1,001,963	+		PGA1_c09740	0.38	+0.3
1,001,963	+		PGA1_c09740	0.38	+0.7
1,001,963	+		PGA1_c09740	0.38	+1.9
1,001,963	+		PGA1_c09740	0.38	+1.0
1,001,966	+		PGA1_c09740	0.40	-0.4
1,001,966	+		PGA1_c09740	0.40	-0.4
1,001,973	+		PGA1_c09740	0.43	+0.3
1,001,973	+		PGA1_c09740	0.43	-0.9
1,001,973	-		PGA1_c09740	0.43	+0.1
1,001,974	+		PGA1_c09740	0.44	+0.4
1,001,974	+		PGA1_c09740	0.44	-0.6
1,001,981	-		PGA1_c09740	0.47	-0.1
1,001,992	+		PGA1_c09740	0.53	-0.8
1,001,992	+		PGA1_c09740	0.53	-0.3
1,001,992	-		PGA1_c09740	0.53	-3.5
1,001,995	-		PGA1_c09740	0.55	-0.6
1,001,995	-		PGA1_c09740	0.55	+0.5
1,002,000	-		PGA1_c09740	0.57	-0.8
1,002,000	-		PGA1_c09740	0.57	-0.6
1,002,002	+		PGA1_c09740	0.58	-0.2
1,002,007	-		PGA1_c09740	0.61	+0.6
1,002,008	+		PGA1_c09740	0.61	-0.0
1,002,010	+		PGA1_c09740	0.62	-0.8
1,002,013	+		PGA1_c09740	0.64	+0.4
1,002,013	+		PGA1_c09740	0.64	-2.2
1,002,018	+		PGA1_c09740	0.67	-1.4
1,002,018	+		PGA1_c09740	0.67	-0.3
1,002,018	+		PGA1_c09740	0.67	+0.6
1,002,018	+		PGA1_c09740	0.67	-0.1
1,002,018	-		PGA1_c09740	0.67	+0.3
1,002,021	+		PGA1_c09740	0.68	-0.6
1,002,023	-		PGA1_c09740	0.69	+1.0
1,002,026	-		PGA1_c09740	0.71	+0.4
1,002,026	-		PGA1_c09740	0.71	-0.7
1,002,026	-		PGA1_c09740	0.71	-0.2
1,002,028	+		PGA1_c09740	0.72	-0.6
1,002,028	+		PGA1_c09740	0.72	+1.8
1,002,028	+		PGA1_c09740	0.72	+0.2
1,002,028	+		PGA1_c09740	0.72	+0.2
1,002,028	+		PGA1_c09740	0.72	-0.0
1,002,028	+		PGA1_c09740	0.72	+0.1
1,002,028	+		PGA1_c09740	0.72	-0.2
1,002,028	+		PGA1_c09740	0.72	+1.2
1,002,028	+		PGA1_c09740	0.72	-2.0
1,002,032	+		PGA1_c09740	0.74	-0.1
1,002,035	-		PGA1_c09740	0.76	-0.1
1,002,035	-		PGA1_c09740	0.76	+0.8
1,002,035	-		PGA1_c09740	0.76	-0.0
1,002,036	-		PGA1_c09740	0.76	-0.9
1,002,036	-		PGA1_c09740	0.76	-0.1
1,002,036	-		PGA1_c09740	0.76	+1.0
1,002,036	-		PGA1_c09740	0.76	+2.4
1,002,036	-		PGA1_c09740	0.76	-0.7
1,002,036	-		PGA1_c09740	0.76	-0.3
1,002,036	-		PGA1_c09740	0.76	-1.0
1,002,049	+		PGA1_c09740	0.83	+0.4
1,002,055	+		PGA1_c09740	0.86	-0.4
1,002,055	+		PGA1_c09740	0.86	+0.5
1,002,060	+		PGA1_c09740	0.89	-1.1
1,002,060	+		PGA1_c09740	0.89	+1.9
1,002,060	+		PGA1_c09740	0.89	-0.5
1,002,060	+		PGA1_c09740	0.89	+1.6
1,002,060	+		PGA1_c09740	0.89	-2.3
1,002,060	+		PGA1_c09740	0.89	-1.5
1,002,060	+		PGA1_c09740	0.89	+0.8
1,002,060	+		PGA1_c09740	0.89	+2.1
1,002,060	+		PGA1_c09740	0.89	-0.4
1,002,063	-				-0.0
1,002,063	-				-1.1
1,002,063	-				+0.8
1,002,063	-				-2.5
1,002,068	-				+0.5
1,002,070	+				+0.8
1,002,070	+				-3.4
1,002,070	+				+0.7
1,002,070	+				-1.3
1,002,070	+				+0.6
1,002,070	+				+1.3
1,002,070	+				-0.2
1,002,070	+				+0.5
1,002,070	+				-2.3
1,002,070	+				+1.0
1,002,070	+				-0.0
1,002,070	+				-0.6
1,002,070	+				-1.3
1,002,070	+				+1.0
1,002,070	+				+0.9
1,002,070	+				+0.7
1,002,070	+				-1.3
1,002,070	+				+0.6
1,002,070	+				-0.1
1,002,070	+				-0.9
1,002,070	+				+1.2
1,002,070	+				-0.9
1,002,070	+				+1.4
1,002,070	+				-0.1
1,002,070	+				-0.8
1,002,070	+				-0.6
1,002,072	+				-0.4
1,002,072	+				-1.1
1,002,075	+				-0.0
1,002,075	+				+0.3
1,002,075	+				-0.6
1,002,078	-				+1.0
1,002,078	-				-0.0
1,002,078	-				-1.5
1,002,078	-				+0.6
1,002,078	-				-1.7
1,002,078	-				-2.0
1,002,078	-				-2.0
1,002,078	-				+1.1
1,002,078	-				+0.0
1,002,078	-				-0.5
1,002,078	-				-0.5
1,002,078	-				-1.0
1,002,078	-				+0.8
1,002,078	-				-1.0
1,002,078	-				-1.9
1,002,078	-				-0.2
1,002,078	-				+1.0
1,002,078	-				+1.0
1,002,078	-				-0.5
1,002,078	-				-2.6
1,002,078	-				-1.8
1,002,078	-				-1.2
1,002,078	-				-0.3
1,002,078	-				+0.3
1,002,080	+				+0.6
1,002,080	-				-0.0
1,002,080	-				+1.1
1,002,080	-				-0.6
1,002,082	+				+0.3
1,002,082	+				-1.3
1,002,082	+				+0.2
1,002,082	+				-1.0
1,002,082	+				+0.5
1,002,082	+				-0.2
1,002,082	+				-0.5
1,002,083	-				-2.2
1,002,088	-				-0.3
1,002,090	-				-2.3
1,002,090	-				+0.1
1,002,090	-				+1.2
1,002,090	-				-0.5
1,002,090	-				-0.9
1,002,093	-				-1.8
1,002,096	+				-1.8
1,002,096	+				+0.4
1,002,098	-				+1.5
1,002,101	+				-0.3
1,002,101	+				-0.4
1,002,102	+				-0.0
1,002,104	-				-0.4
1,002,106	+				-0.0
1,002,106	+				+1.2
1,002,106	+				+0.5
1,002,106	+				+0.5
1,002,106	+				+0.9
1,002,106	+				-0.3
1,002,106	+				+0.4
1,002,106	+				+0.5
1,002,106	+				-0.4
1,002,106	+				-0.1
1,002,106	+				+1.6
1,002,106	+				-0.0
1,002,106	+				-0.0
1,002,106	+				-1.6
1,002,106	+				+0.2
1,002,106	+				+0.3
1,002,106	+				+0.1
1,002,106	+				-1.2
1,002,106	+				-0.6
1,002,106	+				-0.4
1,002,106	+				-0.3
1,002,106	+				-0.0
1,002,106	+				-0.6
1,002,106	+				-0.7
1,002,106	+				-2.3
1,002,106	+				-0.8
1,002,106	+				+0.5
1,002,106	+				-0.2
1,002,106	+				+0.4
1,002,106	+				+2.6
1,002,106	+				+0.1
1,002,106	+				+2.6
1,002,106	+				-0.7
1,002,106	+				+0.3
1,002,106	+				+0.4
1,002,110	-				+0.6
1,002,114	-				-1.0
1,002,114	-				+0.4
1,002,114	-				-0.3
1,002,114	-				-1.5
1,002,114	-				-2.8
1,002,114	-				+0.2
1,002,114	-				+0.5
1,002,114	-				-2.0
1,002,114	-				-1.4
1,002,114	-				-0.8
1,002,114	-				+0.4
1,002,114	-				+0.1
1,002,114	-				-1.3
1,002,114	-				-0.1
1,002,114	-				+0.3
1,002,114	-				-0.5
1,002,114	-				+0.2
1,002,114	-				+1.0
1,002,114	-				-0.2
1,002,114	-				+1.6
1,002,139	+				-0.8
1,002,187	+				-0.3
1,002,187	+				-1.1
1,002,187	+				-0.0
1,002,187	+				-0.3
1,002,187	+				+0.1
1,002,187	+				-2.2
1,002,195	-				-0.7
1,002,195	-				-1.5
1,002,195	-				-0.0
1,002,195	-				-1.4
1,002,215	+				+0.6
1,002,216	-				-0.7
1,002,225	+				-0.7
1,002,225	+				+0.8
1,002,225	+				-1.2
1,002,225	+				-1.3
1,002,225	+				+1.3
1,002,225	+				+0.6
1,002,225	+				-0.3
1,002,225	+				+0.1
1,002,225	+				-0.5
1,002,225	+				+1.0
1,002,228	+				+1.1
1,002,228	+				-0.5
1,002,228	+				+0.4
1,002,233	-				-1.0
1,002,233	-				-1.5
1,002,233	-				-0.2
1,002,233	-				+1.2
1,002,233	-				-2.2
1,002,233	-				-1.1
1,002,233	-				-0.6
1,002,233	-				+0.4
1,002,233	-				+1.0
1,002,233	-				-0.7
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