Strain Fitness in Marinobacter adhaerens HP15 around HP15_897

Experiment: m.b. Ceftazidime 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_895 and HP15_896 overlap by 1 nucleotidesHP15_896 and HP15_897 are separated by 10 nucleotidesHP15_897 and HP15_898 are separated by 21 nucleotidesHP15_898 and HP15_899 are separated by 73 nucleotides HP15_895: HP15_895 - serine/threonine protein kinase, at 909,179 to 910,831 _895 HP15_896: HP15_896 - serine/threonine protein phosphatase, at 910,831 to 911,586 _896 HP15_897: HP15_897 - protein containing forkhead-associated domain, at 911,597 to 911,947 _897 HP15_898: HP15_898 - glutamine amidotransferase class-I, at 911,969 to 912,679 _898 HP15_899: HP15_899 - protein YeeN, at 912,753 to 913,478 _899 Position (kb) 911 912Strain fitness (log2 ratio) -1 0 1at 910.620 kb on + strand, within HP15_895at 910.628 kb on - strand, within HP15_895at 910.628 kb on - strand, within HP15_895at 910.633 kb on - strand, within HP15_895at 910.642 kb on - strand, within HP15_895at 910.733 kb on - strandat 910.774 kb on + strandat 910.782 kb on - strandat 911.264 kb on + strand, within HP15_896at 911.267 kb on - strand, within HP15_896at 911.270 kb on - strand, within HP15_896at 911.272 kb on + strand, within HP15_896at 911.280 kb on - strand, within HP15_896at 911.290 kb on - strand, within HP15_896at 911.338 kb on + strand, within HP15_896at 911.338 kb on + strand, within HP15_896at 911.343 kb on + strand, within HP15_896at 911.343 kb on + strandat 911.343 kb on + strand, within HP15_896at 911.351 kb on - strand, within HP15_896at 911.351 kb on - strand, within HP15_896at 911.363 kb on - strand, within HP15_896at 911.540 kb on - strandat 911.640 kb on + strand, within HP15_897at 911.734 kb on + strand, within HP15_897at 912.143 kb on - strand, within HP15_898at 912.184 kb on - strand, within HP15_898at 912.317 kb on + strand, within HP15_898at 912.367 kb on - strand, within HP15_898at 912.369 kb on + strand, within HP15_898at 912.496 kb on + strand, within HP15_898at 912.598 kb on + strand, within HP15_898

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.032 mg/ml
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910,620 + HP15_895 0.87 -0.5
910,628 - HP15_895 0.88 -0.4
910,628 - HP15_895 0.88 +1.1
910,633 - HP15_895 0.88 +0.9
910,642 - HP15_895 0.89 -0.3
910,733 - -0.0
910,774 + +0.2
910,782 - -0.8
911,264 + HP15_896 0.57 +0.1
911,267 - HP15_896 0.58 -0.1
911,270 - HP15_896 0.58 -0.4
911,272 + HP15_896 0.58 +0.6
911,280 - HP15_896 0.59 +1.6
911,290 - HP15_896 0.61 -0.5
911,338 + HP15_896 0.67 -0.3
911,338 + HP15_896 0.67 -0.5
911,343 + HP15_896 0.68 +0.5
911,343 + -0.1
911,343 + HP15_896 0.68 -0.5
911,351 - HP15_896 0.69 +0.3
911,351 - HP15_896 0.69 -0.1
911,363 - HP15_896 0.70 -0.0
911,540 - +0.3
911,640 + HP15_897 0.12 -0.3
911,734 + HP15_897 0.39 -1.6
912,143 - HP15_898 0.24 +1.3
912,184 - HP15_898 0.30 -1.7
912,317 + HP15_898 0.49 +0.9
912,367 - HP15_898 0.56 +0.7
912,369 + HP15_898 0.56 +0.0
912,496 + HP15_898 0.74 +1.2
912,598 + HP15_898 0.88 -0.1

Or see this region's nucleotide sequence