Strain Fitness in Marinobacter adhaerens HP15 around HP15_2569

Experiment: m.b. Ceftazidime 0.032 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2568 and HP15_2569 are separated by 13 nucleotidesHP15_2569 and HP15_2570 are separated by 146 nucleotides HP15_2568: HP15_2568 - permease of the major facilitator superfamily protein, at 2,715,156 to 2,716,469 _2568 HP15_2569: HP15_2569 - conserved hypothetical protein, membrane, at 2,716,483 to 2,716,770 _2569 HP15_2570: HP15_2570 - methyl-accepting chemotaxis sensory transducer, at 2,716,917 to 2,718,521 _2570 Position (kb) 2716 2717Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2715.531 kb on + strand, within HP15_2568at 2715.656 kb on - strand, within HP15_2568at 2715.746 kb on + strand, within HP15_2568at 2715.758 kb on + strand, within HP15_2568at 2715.758 kb on + strand, within HP15_2568at 2715.825 kb on + strand, within HP15_2568at 2715.833 kb on - strand, within HP15_2568at 2715.896 kb on + strand, within HP15_2568at 2715.952 kb on + strand, within HP15_2568at 2715.957 kb on + strand, within HP15_2568at 2715.957 kb on + strand, within HP15_2568at 2716.017 kb on - strand, within HP15_2568at 2716.041 kb on + strand, within HP15_2568at 2716.049 kb on - strand, within HP15_2568at 2716.090 kb on + strand, within HP15_2568at 2716.127 kb on + strand, within HP15_2568at 2716.156 kb on - strand, within HP15_2568at 2716.179 kb on + strand, within HP15_2568at 2716.246 kb on + strand, within HP15_2568at 2716.438 kb on - strandat 2716.463 kb on + strandat 2716.623 kb on - strand, within HP15_2569at 2716.623 kb on - strand, within HP15_2569at 2716.633 kb on - strand, within HP15_2569at 2716.723 kb on + strand, within HP15_2569at 2716.749 kb on - strandat 2716.768 kb on - strandat 2716.879 kb on + strandat 2717.103 kb on - strand, within HP15_2570at 2717.395 kb on - strand, within HP15_2570at 2717.398 kb on + strand, within HP15_2570at 2717.486 kb on + strand, within HP15_2570at 2717.600 kb on - strand, within HP15_2570at 2717.600 kb on - strand, within HP15_2570at 2717.628 kb on - strand, within HP15_2570at 2717.635 kb on + strand, within HP15_2570at 2717.635 kb on - strand, within HP15_2570at 2717.657 kb on + strand, within HP15_2570at 2717.681 kb on + strand, within HP15_2570at 2717.689 kb on - strand, within HP15_2570

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Ceftazidime 0.032 mg/ml
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2,715,531 + HP15_2568 0.29 +0.4
2,715,656 - HP15_2568 0.38 +2.2
2,715,746 + HP15_2568 0.45 +1.6
2,715,758 + HP15_2568 0.46 -0.4
2,715,758 + HP15_2568 0.46 +0.8
2,715,825 + HP15_2568 0.51 -0.7
2,715,833 - HP15_2568 0.52 -0.5
2,715,896 + HP15_2568 0.56 +1.0
2,715,952 + HP15_2568 0.61 -0.0
2,715,957 + HP15_2568 0.61 +1.6
2,715,957 + HP15_2568 0.61 -0.1
2,716,017 - HP15_2568 0.66 +0.7
2,716,041 + HP15_2568 0.67 -0.9
2,716,049 - HP15_2568 0.68 -0.6
2,716,090 + HP15_2568 0.71 +0.9
2,716,127 + HP15_2568 0.74 -0.2
2,716,156 - HP15_2568 0.76 -0.0
2,716,179 + HP15_2568 0.78 -1.0
2,716,246 + HP15_2568 0.83 +1.2
2,716,438 - -0.2
2,716,463 + +0.0
2,716,623 - HP15_2569 0.49 -1.0
2,716,623 - HP15_2569 0.49 -2.4
2,716,633 - HP15_2569 0.52 -1.0
2,716,723 + HP15_2569 0.83 -3.1
2,716,749 - -2.2
2,716,768 - -1.4
2,716,879 + +2.4
2,717,103 - HP15_2570 0.12 +0.4
2,717,395 - HP15_2570 0.30 -1.2
2,717,398 + HP15_2570 0.30 -0.6
2,717,486 + HP15_2570 0.35 +0.5
2,717,600 - HP15_2570 0.43 +0.5
2,717,600 - HP15_2570 0.43 +0.1
2,717,628 - HP15_2570 0.44 -1.6
2,717,635 + HP15_2570 0.45 +0.5
2,717,635 - HP15_2570 0.45 -0.9
2,717,657 + HP15_2570 0.46 -0.4
2,717,681 + HP15_2570 0.48 +0.6
2,717,689 - HP15_2570 0.48 +2.5

Or see this region's nucleotide sequence