Strain Fitness in Marinobacter adhaerens HP15 around HP15_2563
Experiment: m.b. Ceftazidime 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Ceftazidime 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,708,213 | - | HP15_2562 | 0.26 | +0.8 | |
2,708,770 | - | HP15_2562 | 0.71 | -0.0 | |
2,709,025 | - | -1.4 | |||
2,709,040 | + | -0.6 | |||
2,709,265 | + | +0.2 | |||
2,709,371 | - | HP15_2563 | 0.21 | -1.4 | |
2,709,434 | - | HP15_2563 | 0.29 | -0.2 | |
2,709,434 | - | HP15_2563 | 0.29 | -0.5 | |
2,709,522 | - | HP15_2563 | 0.39 | -0.0 | |
2,709,532 | + | HP15_2563 | 0.40 | -0.2 | |
2,709,532 | + | HP15_2563 | 0.40 | -1.6 | |
2,709,615 | + | HP15_2563 | 0.50 | -1.0 | |
2,709,751 | - | HP15_2563 | 0.67 | +0.9 | |
2,709,854 | + | HP15_2563 | 0.79 | -0.1 | |
2,709,896 | - | HP15_2563 | 0.84 | +0.8 | |
2,709,896 | - | HP15_2563 | 0.84 | -0.2 | |
2,710,099 | + | +0.1 | |||
2,710,099 | + | -0.7 | |||
2,710,107 | - | -1.2 | |||
2,710,107 | - | -0.2 | |||
2,710,232 | + | +1.2 | |||
2,710,232 | + | -0.0 | |||
2,710,266 | + | +0.8 | |||
2,710,269 | - | -0.0 | |||
2,710,359 | - | HP15_2564 | 0.10 | -1.0 | |
2,710,459 | + | HP15_2564 | 0.18 | -0.5 | |
2,710,658 | + | HP15_2564 | 0.34 | +0.1 | |
2,710,713 | - | HP15_2564 | 0.38 | +0.4 | |
2,710,725 | - | HP15_2564 | 0.39 | +0.6 | |
2,710,882 | - | HP15_2564 | 0.51 | -0.1 |
Or see this region's nucleotide sequence