Strain Fitness in Marinobacter adhaerens HP15 around HP15_2534
Experiment: m.b. Ceftazidime 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Ceftazidime 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,678,134 | + | HP15_2533 | 0.18 | -2.5 | |
2,678,257 | - | HP15_2533 | 0.30 | -0.0 | |
2,678,521 | - | HP15_2533 | 0.55 | +0.2 | |
2,678,777 | - | HP15_2533 | 0.79 | -0.0 | |
2,678,790 | + | HP15_2533 | 0.80 | +0.1 | |
2,678,880 | - | HP15_2533 | 0.89 | +0.9 | |
2,678,880 | - | HP15_2533 | 0.89 | +0.2 | |
2,678,954 | - | -0.1 | |||
2,678,954 | - | -0.1 | |||
2,679,056 | - | HP15_2534 | 0.22 | -0.9 | |
2,679,150 | + | HP15_2534 | 0.79 | +0.3 | |
2,679,250 | + | -0.8 | |||
2,679,250 | + | -1.3 | |||
2,679,278 | - | HP15_2535 | 0.11 | +0.7 | |
2,679,306 | + | HP15_2535 | 0.15 | -0.2 | |
2,679,314 | - | HP15_2535 | 0.16 | +0.2 | |
2,679,551 | + | HP15_2535 | 0.52 | -0.8 | |
2,679,551 | + | HP15_2535 | 0.52 | +2.0 | |
2,679,559 | - | HP15_2535 | 0.53 | -0.2 | |
2,679,569 | - | HP15_2535 | 0.55 | -0.2 | |
2,679,576 | + | HP15_2535 | 0.56 | -0.0 | |
2,679,576 | + | HP15_2535 | 0.56 | +0.1 | |
2,679,823 | - | -0.5 | |||
2,679,983 | + | -0.2 | |||
2,679,991 | - | -0.2 | |||
2,680,143 | + | -0.0 | |||
2,680,143 | + | -0.5 | |||
2,680,143 | + | -0.4 | |||
2,680,151 | - | +0.6 | |||
2,680,158 | - | HP15_2536 | 0.10 | -0.7 |
Or see this region's nucleotide sequence