Strain Fitness in Marinobacter adhaerens HP15 around HP15_2493
Experiment: m.b. Ceftazidime 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Ceftazidime 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,631,026 | + | HP15_2491 | 0.54 | +0.2 | |
2,631,079 | - | HP15_2491 | 0.68 | -1.0 | |
2,631,225 | - | +0.3 | |||
2,631,242 | + | +0.4 | |||
2,631,348 | - | HP15_2492 | 0.20 | +0.1 | |
2,631,397 | + | HP15_2492 | 0.27 | -0.3 | |
2,631,402 | + | HP15_2492 | 0.27 | -0.2 | |
2,631,402 | + | HP15_2492 | 0.27 | +0.1 | |
2,631,410 | - | HP15_2492 | 0.28 | +0.4 | |
2,631,410 | - | HP15_2492 | 0.28 | +1.0 | |
2,631,410 | - | HP15_2492 | 0.28 | -0.4 | |
2,631,410 | - | HP15_2492 | 0.28 | +0.1 | |
2,631,595 | - | HP15_2492 | 0.52 | -0.1 | |
2,631,654 | - | HP15_2492 | 0.60 | +0.0 | |
2,631,691 | - | HP15_2492 | 0.65 | -0.7 | |
2,631,691 | - | HP15_2492 | 0.65 | -0.9 | |
2,631,701 | - | HP15_2492 | 0.66 | -0.2 | |
2,631,845 | + | HP15_2492 | 0.84 | -0.9 | |
2,632,039 | - | -3.2 | |||
2,632,054 | - | -1.4 | |||
2,632,137 | + | HP15_2493 | 0.18 | -1.4 | |
2,632,185 | + | HP15_2493 | 0.22 | -1.2 | |
2,632,195 | + | HP15_2493 | 0.23 | -1.9 | |
2,632,203 | - | HP15_2493 | 0.24 | -0.3 | |
2,632,270 | - | HP15_2493 | 0.31 | +0.5 | |
2,632,316 | + | HP15_2493 | 0.35 | +0.5 | |
2,632,932 | + | -0.2 | |||
2,632,932 | + | +0.4 | |||
2,632,962 | - | +0.5 | |||
2,633,010 | + | +2.0 |
Or see this region's nucleotide sequence