Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c25470

Experiment: m.b. syringaldehyde 1.25 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. syringaldehyde 1.25 mM
2,650,190	-		PGA1_c25450	0.46	-1.1
2,650,190	-		PGA1_c25450	0.46	+0.4
2,650,190	-		PGA1_c25450	0.46	-0.2
2,650,231	+		PGA1_c25450	0.49	+0.5
2,650,239	-		PGA1_c25450	0.49	-0.4
2,650,256	-		PGA1_c25450	0.50	-0.8
2,650,338	-		PGA1_c25450	0.55	-0.2
2,650,375	+		PGA1_c25450	0.57	+1.0
2,650,421	+		PGA1_c25450	0.60	+0.7
2,650,427	-		PGA1_c25450	0.61	-3.0
2,650,451	-		PGA1_c25450	0.62	+0.2
2,650,462	-		PGA1_c25450	0.63	+0.0
2,650,473	+		PGA1_c25450	0.63	-1.3
2,650,545	+		PGA1_c25450	0.68	+0.2
2,650,584	+		PGA1_c25450	0.70	+0.2
2,650,594	+		PGA1_c25450	0.71	-2.0
2,650,665	-		PGA1_c25450	0.75	+0.4
2,650,673	-		PGA1_c25450	0.75	-0.2
2,650,716	+		PGA1_c25450	0.78	+0.7
2,650,716	+		PGA1_c25450	0.78	+1.5
2,650,747	-		PGA1_c25450	0.80	-0.2
2,650,786	+		PGA1_c25450	0.82	+0.6
2,650,792	+		PGA1_c25450	0.82	+1.0
2,650,827	+		PGA1_c25450	0.85	-0.1
2,650,832	+		PGA1_c25450	0.85	-0.1
2,650,832	+		PGA1_c25450	0.85	-0.8
2,650,833	-		PGA1_c25450	0.85	+0.8
2,650,833	-		PGA1_c25450	0.85	+1.3
2,650,840	-		PGA1_c25450	0.85	+0.8
2,650,961	-				-0.4
2,651,128	-				-0.2
2,651,216	+				+1.0
2,651,216	+				+1.4
2,651,224	-				-0.3
2,651,224	-				+0.4
2,651,224	-				-1.5
2,651,224	-				+1.3
2,651,237	-				+0.6
2,651,264	+				-1.1
2,651,266	+				-1.0
2,651,326	-				-0.9
2,651,384	+		PGA1_c25470	0.14	+0.4
2,651,384	+		PGA1_c25470	0.14	+0.5
2,651,439	+		PGA1_c25470	0.18	-0.4
2,651,455	-		PGA1_c25470	0.19	+0.4
2,651,461	-		PGA1_c25470	0.19	+0.5
2,651,461	-		PGA1_c25470	0.19	-0.2
2,651,508	-		PGA1_c25470	0.23	+0.6
2,651,530	+		PGA1_c25470	0.24	+0.8
2,651,530	+		PGA1_c25470	0.24	-1.3
2,651,556	-		PGA1_c25470	0.26	+1.7
2,651,562	+		PGA1_c25470	0.27	+1.9
2,651,563	-		PGA1_c25470	0.27	+0.2
2,651,570	-		PGA1_c25470	0.27	-0.3
2,651,586	-		PGA1_c25470	0.28	+1.1
2,651,606	+		PGA1_c25470	0.30	+0.5
2,651,642	-		PGA1_c25470	0.32	-1.0
2,651,699	+		PGA1_c25470	0.36	+0.7
2,651,767	+		PGA1_c25470	0.41	+1.2
2,651,784	+		PGA1_c25470	0.42	+1.5
2,651,792	-		PGA1_c25470	0.43	+0.7
2,651,814	+		PGA1_c25470	0.44	+0.8
2,651,814	+		PGA1_c25470	0.44	-0.8
2,651,814	+		PGA1_c25470	0.44	+0.0
2,651,814	+		PGA1_c25470	0.44	-1.5
2,651,814	+		PGA1_c25470	0.44	+0.9
2,651,814	+		PGA1_c25470	0.44	+1.2
2,651,814	+		PGA1_c25470	0.44	+1.3
2,651,820	+		PGA1_c25470	0.45	+1.5
2,651,822	-		PGA1_c25470	0.45	+0.6
2,651,822	-		PGA1_c25470	0.45	-0.1
2,651,829	+		PGA1_c25470	0.45	-0.9
2,651,829	+		PGA1_c25470	0.45	+1.9
2,651,829	+		PGA1_c25470	0.45	+3.2
2,651,829	+		PGA1_c25470	0.45	+1.8
2,651,829	+		PGA1_c25470	0.45	+0.1
2,651,829	+		PGA1_c25470	0.45	+0.5
2,651,829	+		PGA1_c25470	0.45	+0.1
2,651,837	-		PGA1_c25470	0.46	-1.0
2,651,837	-		PGA1_c25470	0.46	+0.2
2,651,837	-		PGA1_c25470	0.46	+0.4
2,651,837	-		PGA1_c25470	0.46	-0.6
2,651,837	-		PGA1_c25470	0.46	-1.0
2,651,837	-		PGA1_c25470	0.46	+1.3
2,651,837	-		PGA1_c25470	0.46	-1.1
2,651,837	-		PGA1_c25470	0.46	+0.4
2,651,837	-		PGA1_c25470	0.46	-0.7
2,651,837	-		PGA1_c25470	0.46	-0.8
2,651,837	-		PGA1_c25470	0.46	+0.1
2,651,839	+		PGA1_c25470	0.46	-0.0
2,651,848	+		PGA1_c25470	0.47	+0.2
2,651,848	+		PGA1_c25470	0.47	-0.1
2,651,848	+		PGA1_c25470	0.47	+1.7
2,651,848	+		PGA1_c25470	0.47	+0.3
2,651,848	+		PGA1_c25470	0.47	-0.6
2,651,848	+		PGA1_c25470	0.47	+1.1
2,651,848	+		PGA1_c25470	0.47	+0.6
2,651,848	+		PGA1_c25470	0.47	+1.6
2,651,848	+		PGA1_c25470	0.47	+1.7
2,651,848	+		PGA1_c25470	0.47	+1.6
2,651,856	-		PGA1_c25470	0.47	+1.5
2,651,952	+		PGA1_c25470	0.54	+0.1
2,651,952	+		PGA1_c25470	0.54	+0.9
2,651,960	-		PGA1_c25470	0.55	+0.1
2,651,960	-		PGA1_c25470	0.55	+0.6
2,651,984	-		PGA1_c25470	0.57	+0.2
2,652,156	-		PGA1_c25470	0.69	-0.1
2,652,201	-		PGA1_c25470	0.72	+0.1
2,652,242	+		PGA1_c25470	0.75	+1.3
2,652,277	+		PGA1_c25470	0.77	-0.5
2,652,284	-		PGA1_c25470	0.78	+1.7
2,652,285	-		PGA1_c25470	0.78	-0.2
2,652,286	+		PGA1_c25470	0.78	+2.4
2,652,286	+		PGA1_c25470	0.78	+1.5
2,652,286	+		PGA1_c25470	0.78	+2.1
2,652,286	+		PGA1_c25470	0.78	+2.0
2,652,294	-		PGA1_c25470	0.79	-0.2
2,652,294	-		PGA1_c25470	0.79	-0.1
2,652,336	+		PGA1_c25470	0.82	+0.5
2,652,336	+		PGA1_c25470	0.82	+0.9
2,652,339	-		PGA1_c25470	0.82	+0.7
2,652,344	-		PGA1_c25470	0.82	-0.3
2,652,344	-		PGA1_c25470	0.82	+0.3
2,652,346	+		PGA1_c25470	0.82	+0.6
2,652,419	-		PGA1_c25470	0.87	+0.9
2,652,435	+		PGA1_c25470	0.89	-0.4
2,652,459	+				+1.7
2,652,459	+				+1.3
2,652,467	-				+0.4
2,652,467	-				+1.0
2,652,467	-				+0.2
2,652,467	-				+0.2
2,652,472	+				+2.0
2,652,474	+				+1.4
2,652,480	-				+1.4
2,652,513	+				+2.2
2,652,524	+				+0.5
2,652,529	+				+1.1
2,652,529	+				+0.5
2,652,529	+				+0.3
2,652,529	+				-0.3
2,652,529	+				+1.0
2,652,529	+				-1.6
2,652,529	+				+0.6
2,652,537	-				-0.1
2,652,537	-				+0.7
2,652,539	+				+0.5
2,652,539	+				+0.9
2,652,539	+				+0.5
2,652,539	+				+1.2
2,652,547	-				-0.2
2,652,582	+				+0.6
2,652,590	-				+0.5
2,652,597	+				+1.5
2,652,597	+				+1.5
2,652,597	+				+1.8
2,652,597	+				+1.1
2,652,605	-				+0.1
2,652,605	-				+2.3
2,652,605	-				+0.7
2,652,605	-				-0.1
2,652,605	-				-0.4
2,652,608	+				+0.6
2,652,608	+				+1.2
2,652,636	-				+0.3
2,652,640	-				+1.2
2,652,642	+				+0.8
2,652,642	+				+0.4
2,652,645	-				+0.9
2,652,654	+				+0.6
2,652,660	-				-0.8
2,652,710	+				+0.9
2,652,710	+				+1.7
2,652,718	-				-1.2
2,652,718	-				-0.3
2,652,820	-				-0.9
2,652,839	-				-1.0
2,652,839	-				-0.3
2,652,839	-				+1.3
2,652,859	-				-0.9
2,652,889	+				-0.3
2,652,889	+				+1.1
2,652,889	+				+0.9
2,652,889	+				+1.0
2,652,897	-				+0.9
2,653,070	-				+0.4
2,653,155	+				+0.8
2,653,155	+				+0.5
2,653,167	+				+1.2
2,653,210	+				+1.2
2,653,210	+				+0.1
2,653,210	+				-2.2
2,653,210	+				+0.8
2,653,210	+				+0.4
2,653,210	+				-0.3
2,653,210	+				+1.5
2,653,210	+				-1.4
2,653,210	+				+1.1
2,653,210	+				+0.8
2,653,210	+				-2.0
2,653,210	+				+0.6
2,653,218	-				+0.3
2,653,218	-				+0.6
2,653,218	-				+0.5
2,653,218	-				-0.3
2,653,218	-				-1.8
2,653,218	-				-0.3
2,653,218	-				+1.4
2,653,218	-				-0.0
2,653,218	-				-0.2
2,653,218	-				-1.2
2,653,218	-				-0.2
2,653,218	-				+0.5
2,653,218	-				+0.4
2,653,218	-				+0.4
2,653,218	-				-1.8
2,653,218	-				-0.6
2,653,218	-				-0.4
2,653,218	-				-2.5
2,653,218	-				-0.6
2,653,218	-				+0.2
2,653,218	-				+0.8
2,653,218	-				-0.9
2,653,218	-				+0.8
2,653,299	+				+0.2
2,653,306	+				-0.2
2,653,311	+				-3.8
2,653,311	+				+1.2
2,653,332	+				+1.2
2,653,350	-				+0.0
2,653,387	-				-0.4
2,653,413	+				+0.5
2,653,454	-				+0.7
2,653,464	-				+1.2
2,653,490	+				+0.2
2,653,490	+				+1.0
2,653,490	+				-0.7
2,653,490	+				-0.0
2,653,490	+				-0.1
2,653,490	+				+1.0
2,653,490	+				-0.8
2,653,490	+				+1.7
2,653,490	+				+1.3
2,653,498	-				+1.1
2,653,498	-				+1.5
2,653,498	-				+1.3
2,653,498	-				-0.2
2,653,498	-				-0.8
2,653,551	+				-0.8
2,653,580	+				+0.7