Strain Fitness in Marinobacter adhaerens HP15 around HP15_2118
Experiment: m.b. Ceftazidime 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Ceftazidime 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,216,111 | - | HP15_2116 | 0.77 | +2.1 | |
2,216,116 | - | HP15_2116 | 0.77 | -1.4 | |
2,216,672 | - | HP15_2117 | 0.43 | -1.4 | |
2,216,810 | - | HP15_2117 | 0.64 | -0.2 | |
2,216,915 | + | HP15_2117 | 0.81 | -1.3 | |
2,217,000 | + | +1.4 | |||
2,217,000 | + | +0.6 | |||
2,217,056 | + | -0.8 | |||
2,217,064 | - | +0.9 | |||
2,217,064 | - | +0.1 | |||
2,217,167 | - | HP15_2118 | 0.16 | -0.6 | |
2,217,214 | + | HP15_2118 | 0.23 | -0.7 | |
2,217,424 | - | HP15_2118 | 0.54 | +0.1 | |
2,217,460 | + | HP15_2118 | 0.59 | -0.7 | |
2,217,801 | + | -1.5 | |||
2,217,836 | + | +0.8 | |||
2,217,844 | - | -0.6 | |||
2,217,868 | - | +0.1 | |||
2,217,870 | + | +0.8 | |||
2,217,912 | + | HP15_2119 | 0.13 | -0.2 | |
2,217,912 | + | HP15_2119 | 0.13 | +0.3 | |
2,218,032 | + | HP15_2119 | 0.25 | -0.2 | |
2,218,207 | + | HP15_2119 | 0.41 | -1.0 | |
2,218,306 | + | HP15_2119 | 0.51 | -0.0 | |
2,218,356 | - | HP15_2119 | 0.56 | -0.2 |
Or see this region's nucleotide sequence