Strain Fitness in Marinobacter adhaerens HP15 around HP15_1940
Experiment: m.b. Ceftazidime 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Ceftazidime 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,059,040 | - | HP15_1939 | 0.49 | +0.0 | |
2,059,040 | - | HP15_1939 | 0.49 | +0.5 | |
2,059,061 | - | HP15_1939 | 0.50 | -0.7 | |
2,059,214 | + | HP15_1939 | 0.58 | -0.3 | |
2,059,292 | + | HP15_1939 | 0.62 | +1.0 | |
2,059,524 | - | HP15_1939 | 0.74 | +0.4 | |
2,059,545 | - | HP15_1939 | 0.75 | +0.2 | |
2,059,684 | - | HP15_1939 | 0.82 | -0.2 | |
2,059,918 | + | -0.1 | |||
2,059,958 | + | +1.8 | |||
2,060,089 | - | HP15_1940 | 0.19 | -0.2 | |
2,060,099 | - | HP15_1940 | 0.22 | -1.4 | |
2,060,274 | + | HP15_1940 | 0.66 | +0.0 | |
2,060,459 | + | +1.0 | |||
2,060,563 | - | HP15_1941 | 0.12 | +0.4 | |
2,060,566 | + | HP15_1941 | 0.12 | +0.4 | |
2,060,628 | - | HP15_1941 | 0.19 | +0.0 | |
2,060,678 | + | HP15_1941 | 0.24 | -0.2 | |
2,060,704 | - | HP15_1941 | 0.26 | +0.7 | |
2,060,769 | + | HP15_1941 | 0.33 | +1.3 | |
2,060,829 | - | HP15_1941 | 0.38 | +1.0 | |
2,060,913 | - | HP15_1941 | 0.47 | +0.0 | |
2,060,988 | + | HP15_1941 | 0.54 | -0.6 | |
2,061,012 | + | HP15_1941 | 0.57 | +0.4 | |
2,061,117 | - | HP15_1941 | 0.67 | +0.1 | |
2,061,182 | + | HP15_1941 | 0.74 | +0.8 | |
2,061,294 | + | HP15_1941 | 0.85 | -0.2 | |
2,061,302 | - | HP15_1941 | 0.85 | -1.3 | |
2,061,313 | - | HP15_1941 | 0.87 | -0.2 | |
2,061,353 | - | -0.9 | |||
2,061,360 | - | -0.1 |
Or see this region's nucleotide sequence