Strain Fitness in Marinobacter adhaerens HP15 around HP15_1895
Experiment: m.b. Ceftazidime 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Ceftazidime 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,002,473 | - | HP15_1894 | 0.42 | -0.5 | |
2,002,857 | + | HP15_1894 | 0.69 | +0.3 | |
2,002,892 | - | HP15_1894 | 0.72 | -0.9 | |
2,002,892 | - | HP15_1894 | 0.72 | -0.3 | |
2,002,947 | - | HP15_1894 | 0.76 | -0.5 | |
2,003,037 | - | HP15_1894 | 0.82 | -1.3 | |
2,003,062 | + | HP15_1894 | 0.84 | -0.4 | |
2,003,084 | + | HP15_1894 | 0.85 | -0.5 | |
2,003,084 | + | HP15_1894 | 0.85 | +0.5 | |
2,003,092 | - | HP15_1894 | 0.86 | -0.6 | |
2,003,092 | - | HP15_1894 | 0.86 | +0.1 | |
2,003,092 | - | HP15_1894 | 0.86 | -0.9 | |
2,003,228 | + | -0.3 | |||
2,003,236 | - | +0.0 | |||
2,003,236 | - | -0.7 | |||
2,003,262 | - | +0.1 | |||
2,003,280 | - | +0.1 | |||
2,003,394 | + | -0.7 | |||
2,003,600 | + | HP15_1895 | 0.30 | -1.3 | |
2,003,600 | + | HP15_1895 | 0.30 | -0.8 | |
2,003,608 | - | HP15_1895 | 0.32 | +0.1 | |
2,004,139 | - | +2.2 | |||
2,004,274 | + | HP15_1896 | 0.16 | +0.2 | |
2,004,282 | - | HP15_1896 | 0.16 | -0.2 | |
2,004,381 | + | HP15_1896 | 0.23 | -0.0 | |
2,004,386 | + | HP15_1896 | 0.23 | +1.5 | |
2,004,402 | + | HP15_1896 | 0.25 | -0.3 | |
2,004,440 | - | HP15_1896 | 0.27 | -0.8 | |
2,004,606 | + | HP15_1896 | 0.39 | +0.9 | |
2,004,617 | + | HP15_1896 | 0.39 | -0.0 | |
2,004,702 | + | HP15_1896 | 0.45 | +1.8 | |
2,004,931 | + | HP15_1896 | 0.61 | -0.3 |
Or see this region's nucleotide sequence