Strain Fitness in Marinobacter adhaerens HP15 around HP15_1049
Experiment: m.b. Ceftazidime 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Ceftazidime 0.032 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,070,115 | + | HP15_1048 | 0.32 | -0.9 | |
1,070,691 | - | HP15_1048 | 0.87 | -2.2 | |
1,070,761 | + | -0.6 | |||
1,070,766 | + | +0.1 | |||
1,070,797 | - | -0.2 | |||
1,070,821 | + | +0.9 | |||
1,070,829 | - | -2.2 | |||
1,070,872 | - | HP15_1049 | 0.18 | -0.4 | |
1,071,025 | + | HP15_1049 | 0.77 | -0.9 | |
1,071,036 | - | HP15_1049 | 0.81 | -0.9 | |
1,071,039 | + | HP15_1049 | 0.82 | -0.8 | |
1,071,200 | + | +0.2 | |||
1,071,203 | - | -0.6 | |||
1,071,216 | - | -0.2 | |||
1,071,241 | - | -0.5 | |||
1,071,245 | + | +0.9 | |||
1,071,253 | - | -0.3 | |||
1,071,299 | - | -0.3 | |||
1,071,356 | + | +1.1 | |||
1,071,364 | - | +0.1 | |||
1,071,413 | + | HP15_1050 | 0.19 | -0.2 | |
1,071,431 | - | HP15_1050 | 0.23 | -1.1 | |
1,071,439 | - | HP15_1050 | 0.24 | +0.3 | |
1,071,478 | + | HP15_1050 | 0.32 | -0.3 | |
1,071,478 | + | HP15_1050 | 0.32 | -0.2 | |
1,071,486 | - | HP15_1050 | 0.34 | +0.0 | |
1,071,571 | - | HP15_1050 | 0.52 | +0.4 | |
1,071,631 | - | HP15_1050 | 0.65 | -0.5 | |
1,071,764 | - | -1.2 | |||
1,071,803 | + | -0.8 | |||
1,071,852 | + | HP15_1051 | 0.11 | +1.5 | |
1,071,864 | - | HP15_1051 | 0.14 | +0.3 | |
1,071,935 | + | HP15_1051 | 0.33 | -0.2 | |
1,071,964 | - | HP15_1051 | 0.40 | +0.2 | |
1,071,984 | - | HP15_1051 | 0.46 | +0.3 | |
1,072,070 | - | HP15_1051 | 0.69 | +0.5 |
Or see this region's nucleotide sequence