Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c00970 and PGA1_c00980 are separated by 190 nucleotides PGA1_c00980 and PGA1_c00990 are separated by 139 nucleotides PGA1_c00990 and PGA1_c01000 are separated by 92 nucleotides
PGA1_c00970: PGA1_c00970 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH, at 91,856 to 92,806
_c00970
PGA1_c00980: PGA1_c00980 - Uncharacterized conserved protein, at 92,997 to 93,566
_c00980
PGA1_c00990: PGA1_c00990 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase FolK, at 93,706 to 94,275
_c00990
PGA1_c01000: PGA1_c01000 - DNA-directed RNA polymerase subunit omega, at 94,368 to 94,721
_c01000
Position (kb)
92
93
94 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 92.851 kb on + strand at 92.851 kb on + strand at 92.851 kb on + strand at 92.851 kb on + strand at 92.851 kb on + strand at 92.856 kb on + strand at 92.859 kb on - strand at 92.859 kb on - strand at 92.859 kb on - strand at 92.864 kb on - strand at 92.864 kb on - strand at 92.864 kb on - strand at 92.864 kb on - strand at 92.864 kb on - strand at 92.877 kb on + strand at 92.947 kb on + strand at 92.951 kb on + strand at 92.959 kb on - strand at 93.055 kb on + strand, within PGA1_c00980 at 93.069 kb on - strand, within PGA1_c00980 at 93.141 kb on + strand, within PGA1_c00980 at 93.149 kb on + strand, within PGA1_c00980 at 93.157 kb on - strand, within PGA1_c00980 at 93.164 kb on + strand, within PGA1_c00980 at 93.248 kb on + strand, within PGA1_c00980 at 93.255 kb on + strand, within PGA1_c00980 at 93.256 kb on - strand, within PGA1_c00980 at 93.256 kb on - strand, within PGA1_c00980 at 93.285 kb on + strand, within PGA1_c00980 at 93.285 kb on + strand, within PGA1_c00980 at 93.324 kb on - strand, within PGA1_c00980 at 93.341 kb on + strand, within PGA1_c00980 at 93.345 kb on + strand, within PGA1_c00980 at 93.362 kb on - strand, within PGA1_c00980 at 93.413 kb on + strand, within PGA1_c00980 at 93.418 kb on + strand, within PGA1_c00980 at 93.421 kb on - strand, within PGA1_c00980 at 93.421 kb on - strand, within PGA1_c00980 at 93.422 kb on + strand, within PGA1_c00980 at 93.426 kb on - strand, within PGA1_c00980 at 93.430 kb on - strand, within PGA1_c00980 at 93.439 kb on + strand, within PGA1_c00980 at 93.466 kb on - strand, within PGA1_c00980 at 93.494 kb on - strand, within PGA1_c00980 at 93.511 kb on + strand at 93.511 kb on + strand at 93.511 kb on + strand at 93.511 kb on + strand at 93.511 kb on + strand at 93.518 kb on + strand at 93.529 kb on + strand at 93.529 kb on + strand at 93.539 kb on + strand at 93.547 kb on + strand at 93.547 kb on - strand at 93.547 kb on - strand at 93.590 kb on + strand at 93.597 kb on + strand at 93.598 kb on - strand at 93.608 kb on - strand at 93.643 kb on + strand at 93.652 kb on - strand at 94.269 kb on + strand at 94.269 kb on + strand at 94.269 kb on + strand at 94.277 kb on - strand at 94.277 kb on - strand at 94.300 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 92,851 + +0.6 92,851 + -0.1 92,851 + +0.8 92,851 + +0.4 92,851 + +0.7 92,856 + +0.4 92,859 - +0.8 92,859 - +0.5 92,859 - -0.5 92,864 - +0.5 92,864 - -0.8 92,864 - +1.0 92,864 - -0.1 92,864 - -0.5 92,877 + +0.9 92,947 + +0.0 92,951 + -0.3 92,959 - +0.0 93,055 + PGA1_c00980 0.10 -0.8 93,069 - PGA1_c00980 0.13 -0.7 93,141 + PGA1_c00980 0.25 -1.5 93,149 + PGA1_c00980 0.27 +0.6 93,157 - PGA1_c00980 0.28 -1.3 93,164 + PGA1_c00980 0.29 -0.7 93,248 + PGA1_c00980 0.44 -2.2 93,255 + PGA1_c00980 0.45 -2.3 93,256 - PGA1_c00980 0.45 -1.0 93,256 - PGA1_c00980 0.45 -1.1 93,285 + PGA1_c00980 0.51 -2.5 93,285 + PGA1_c00980 0.51 -1.7 93,324 - PGA1_c00980 0.57 -1.0 93,341 + PGA1_c00980 0.60 -2.4 93,345 + PGA1_c00980 0.61 -0.3 93,362 - PGA1_c00980 0.64 -1.1 93,413 + PGA1_c00980 0.73 -0.8 93,418 + PGA1_c00980 0.74 +0.4 93,421 - PGA1_c00980 0.74 -2.0 93,421 - PGA1_c00980 0.74 -0.7 93,422 + PGA1_c00980 0.75 -1.4 93,426 - PGA1_c00980 0.75 -0.9 93,430 - PGA1_c00980 0.76 +1.7 93,439 + PGA1_c00980 0.78 -0.3 93,466 - PGA1_c00980 0.82 -1.3 93,494 - PGA1_c00980 0.87 -0.5 93,511 + -0.6 93,511 + -3.7 93,511 + -1.5 93,511 + -0.8 93,511 + -1.8 93,518 + -1.8 93,529 + -1.5 93,529 + -1.8 93,539 + -1.3 93,547 + -0.0 93,547 - +0.4 93,547 - -1.6 93,590 + +0.9 93,597 + +0.1 93,598 - -1.8 93,608 - -1.6 93,643 + -0.7 93,652 - +0.2 94,269 + -0.6 94,269 + +0.8 94,269 + -0.0 94,277 - -0.3 94,277 - -0.6 94,300 - +0.9
Or see this region's nucleotide sequence