Strain Fitness in Marinobacter adhaerens HP15 around HP15_88

Experiment: m.b. Ceftazidime 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Ceftazidime 0.008 mg/ml
92,976	-		HP15_86	0.23	+1.7
93,009	-		HP15_86	0.28	+0.3
93,011	+		HP15_86	0.28	+2.2
93,011	+		HP15_86	0.28	+0.2
93,011	+		HP15_86	0.28	-0.7
93,019	-		HP15_86	0.29	-0.3
93,037	+		HP15_86	0.32	-0.1
93,037	+		HP15_86	0.32	-0.4
93,037	+		HP15_86	0.32	-0.3
93,038	+		HP15_86	0.32	+0.0
93,045	-		HP15_86	0.33	-0.4
93,053	+		HP15_86	0.34	+0.3
93,061	-		HP15_86	0.36	+0.3
93,186	-		HP15_86	0.54	+0.0
93,288	+		HP15_86	0.69	+0.6
93,308	+		HP15_86	0.72	-0.2
93,315	-		HP15_86	0.73	+0.1
93,359	+		HP15_86	0.79	-0.2
93,640	-		HP15_87	0.34	-1.3
93,640	-		HP15_87	0.34	-0.4
93,703	-		HP15_87	0.48	+0.1
93,720	-		HP15_87	0.52	-0.8
93,798	+		HP15_87	0.70	+0.1
93,811	-		HP15_87	0.73	-0.6
93,813	+		HP15_87	0.73	-0.3
93,995	-				-1.9
94,000	+		HP15_88	0.10	+1.7
94,002	+		HP15_88	0.11	+1.2
94,127	-		HP15_88	0.28	+1.2
94,137	+		HP15_88	0.29	+0.4
94,139	+		HP15_88	0.29	+0.7
94,145	-		HP15_88	0.30	+0.6
94,147	-		HP15_88	0.31	+0.3
94,147	-		HP15_88	0.31	-0.1
94,153	+		HP15_88	0.31	+0.4
94,161	-		HP15_88	0.33	-1.2
94,210	+		HP15_88	0.39	+0.6
94,235	-		HP15_88	0.43	+0.0
94,260	+		HP15_88	0.46	-0.0
94,315	-		HP15_88	0.54	-0.1
94,410	-		HP15_88	0.67	+0.5
94,506	+		HP15_88	0.80	+0.7
94,519	-		HP15_88	0.82	-0.0
94,577	+		HP15_88	0.90	+2.0
94,599	-				+0.0
94,667	-				-0.4
94,667	-				+0.1
94,699	-				-0.3
94,702	+				+0.8
94,709	+				-0.3
94,709	+				+0.6
94,900	-		HP15_89	0.45	+0.0
94,912	-		HP15_89	0.48	-0.4
95,052	-		HP15_89	0.82	+0.6
95,062	-		HP15_89	0.84	-0.4
95,110	+				-1.0
95,120	-				+0.1
95,120	-				+0.5
95,147	-				+0.1
95,148	+				+0.4
95,148	+				+0.5
95,148	+				-0.2
95,148	+				+0.9
95,148	+				-0.6
95,148	+				+0.2
95,158	+				-0.3
95,166	-				-0.2
95,169	+				+0.0
95,366	-		HP15_90	0.28	-0.1
95,384	+		HP15_90	0.31	-0.3
95,392	-		HP15_90	0.33	-0.5
95,624	-		HP15_90	0.70	-0.3
95,640	-		HP15_90	0.72	-0.6