Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c35990 and PGA1_c36000 are separated by 24 nucleotides PGA1_c36000 and PGA1_c36010 are separated by 15 nucleotides PGA1_c36010 and PGA1_c36020 overlap by 4 nucleotides PGA1_c36020 and PGA1_c36030 are separated by 222 nucleotides
PGA1_c35990: PGA1_c35990 - OstA-like protein, similar to lipopolysaccharide export system protein LptA, at 3,767,708 to 3,768,187
_c35990
PGA1_c36000: PGA1_c36000 - Protein of unknown function (DUF1239)., at 3,768,212 to 3,768,811
_c36000
PGA1_c36010: PGA1_c36010 - arabinose 5-phosphate isomerase KdsD, at 3,768,827 to 3,769,798
_c36010
PGA1_c36020: PGA1_c36020 - putative 3'-5'-exonuclease, at 3,769,795 to 3,770,409
_c36020
PGA1_c36030: PGA1_c36030 - tRNA-Leu, at 3,770,632 to 3,770,718
_c36030
Position (kb)
3768
3769
3770 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3768.832 kb on - strand at 3768.832 kb on - strand at 3768.832 kb on - strand at 3768.832 kb on - strand at 3769.801 kb on - strand at 3769.801 kb on - strand at 3769.801 kb on - strand at 3769.801 kb on - strand at 3769.801 kb on - strand at 3769.801 kb on - strand at 3769.801 kb on - strand at 3769.801 kb on - strand at 3770.084 kb on - strand, within PGA1_c36020 at 3770.091 kb on - strand, within PGA1_c36020 at 3770.214 kb on - strand, within PGA1_c36020 at 3770.492 kb on + strand at 3770.492 kb on + strand at 3770.492 kb on + strand at 3770.522 kb on + strand at 3770.529 kb on + strand at 3770.534 kb on + strand at 3770.537 kb on - strand at 3770.537 kb on - strand at 3770.537 kb on - strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.539 kb on + strand at 3770.542 kb on - strand at 3770.542 kb on - strand at 3770.547 kb on - strand at 3770.547 kb on - strand at 3770.547 kb on - strand at 3770.547 kb on - strand at 3770.547 kb on - strand at 3770.547 kb on - strand at 3770.547 kb on - strand at 3770.547 kb on - strand at 3770.566 kb on - strand at 3770.589 kb on + strand at 3770.592 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 3,768,832 - -0.9 3,768,832 - -0.0 3,768,832 - +1.2 3,768,832 - -0.4 3,769,801 - +0.4 3,769,801 - +0.2 3,769,801 - -1.6 3,769,801 - -0.3 3,769,801 - +0.3 3,769,801 - +0.7 3,769,801 - +0.1 3,769,801 - -0.3 3,770,084 - PGA1_c36020 0.47 +0.2 3,770,091 - PGA1_c36020 0.48 -1.4 3,770,214 - PGA1_c36020 0.68 -1.0 3,770,492 + +0.2 3,770,492 + -1.1 3,770,492 + +0.7 3,770,522 + +0.3 3,770,529 + -1.1 3,770,534 + +0.5 3,770,537 - +0.9 3,770,537 - +0.4 3,770,537 - -0.2 3,770,539 + -0.2 3,770,539 + +2.0 3,770,539 + -0.9 3,770,539 + +0.8 3,770,539 + +0.1 3,770,539 + -0.7 3,770,539 + +0.2 3,770,539 + +1.1 3,770,539 + -0.1 3,770,539 + +1.1 3,770,539 + -2.3 3,770,539 + +1.4 3,770,539 + +2.1 3,770,539 + +0.7 3,770,542 - +0.1 3,770,542 - -0.3 3,770,547 - +0.2 3,770,547 - +1.8 3,770,547 - +0.7 3,770,547 - -0.2 3,770,547 - +1.0 3,770,547 - -1.1 3,770,547 - -0.7 3,770,547 - -2.1 3,770,566 - -0.0 3,770,589 + -0.1 3,770,592 - -0.2
Or see this region's nucleotide sequence