Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c35520 and PGA1_c35530 are separated by 71 nucleotides PGA1_c35530 and PGA1_c35540 are separated by 145 nucleotides PGA1_c35540 and PGA1_c35550 are separated by 25 nucleotides
PGA1_c35520: PGA1_c35520 - HemY-like protein, at 3,722,997 to 3,724,520
_c35520
PGA1_c35530: PGA1_c35530 - tRNA-Thr, at 3,724,592 to 3,724,667
_c35530
PGA1_c35540: PGA1_c35540 - alcohol dehydrogenase AlkJ, at 3,724,813 to 3,726,429
_c35540
PGA1_c35550: PGA1_c35550 - medium-chain-fatty-acid--CoA ligase AlkK, at 3,726,455 to 3,728,074
_c35550
Position (kb)
3724
3725
3726
3727 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3723.839 kb on + strand, within PGA1_c35520 at 3723.915 kb on + strand, within PGA1_c35520 at 3723.915 kb on + strand, within PGA1_c35520 at 3723.923 kb on - strand, within PGA1_c35520 at 3724.002 kb on - strand, within PGA1_c35520 at 3724.095 kb on - strand, within PGA1_c35520 at 3724.290 kb on - strand, within PGA1_c35520 at 3724.371 kb on + strand at 3724.376 kb on + strand at 3724.466 kb on + strand at 3724.474 kb on - strand at 3724.543 kb on + strand at 3724.545 kb on - strand at 3724.573 kb on + strand at 3724.578 kb on + strand at 3724.578 kb on + strand at 3724.581 kb on - strand at 3724.581 kb on - strand at 3724.588 kb on + strand at 3724.591 kb on - strand at 3724.644 kb on - strand, within PGA1_c35530 at 3724.709 kb on - strand at 3724.724 kb on + strand at 3724.802 kb on + strand at 3724.815 kb on - strand at 3724.834 kb on - strand at 3724.852 kb on - strand at 3724.925 kb on + strand at 3725.019 kb on - strand, within PGA1_c35540 at 3725.062 kb on + strand, within PGA1_c35540 at 3725.062 kb on + strand, within PGA1_c35540 at 3725.062 kb on + strand, within PGA1_c35540 at 3725.062 kb on + strand, within PGA1_c35540 at 3725.068 kb on + strand, within PGA1_c35540 at 3725.068 kb on + strand, within PGA1_c35540 at 3725.128 kb on - strand, within PGA1_c35540 at 3725.137 kb on + strand, within PGA1_c35540 at 3725.137 kb on + strand, within PGA1_c35540 at 3725.137 kb on + strand, within PGA1_c35540 at 3725.144 kb on + strand, within PGA1_c35540 at 3725.152 kb on - strand, within PGA1_c35540 at 3725.364 kb on + strand, within PGA1_c35540 at 3725.372 kb on - strand, within PGA1_c35540 at 3725.401 kb on + strand, within PGA1_c35540 at 3725.417 kb on - strand, within PGA1_c35540 at 3725.417 kb on - strand, within PGA1_c35540 at 3725.417 kb on - strand, within PGA1_c35540 at 3725.464 kb on + strand, within PGA1_c35540 at 3725.481 kb on + strand, within PGA1_c35540 at 3725.489 kb on - strand, within PGA1_c35540 at 3725.528 kb on + strand, within PGA1_c35540 at 3725.531 kb on - strand, within PGA1_c35540 at 3725.548 kb on + strand, within PGA1_c35540 at 3725.548 kb on + strand, within PGA1_c35540 at 3725.556 kb on - strand, within PGA1_c35540 at 3725.619 kb on + strand, within PGA1_c35540 at 3725.679 kb on + strand, within PGA1_c35540 at 3725.679 kb on + strand, within PGA1_c35540 at 3725.679 kb on + strand, within PGA1_c35540 at 3725.679 kb on + strand, within PGA1_c35540 at 3725.687 kb on - strand, within PGA1_c35540 at 3725.733 kb on - strand, within PGA1_c35540 at 3725.768 kb on - strand, within PGA1_c35540 at 3725.862 kb on - strand, within PGA1_c35540 at 3725.896 kb on - strand, within PGA1_c35540 at 3725.899 kb on - strand, within PGA1_c35540 at 3725.964 kb on - strand, within PGA1_c35540 at 3726.007 kb on + strand, within PGA1_c35540 at 3726.007 kb on + strand, within PGA1_c35540 at 3726.010 kb on - strand, within PGA1_c35540 at 3726.017 kb on + strand, within PGA1_c35540 at 3726.024 kb on + strand, within PGA1_c35540 at 3726.054 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.087 kb on + strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.095 kb on - strand, within PGA1_c35540 at 3726.187 kb on + strand, within PGA1_c35540 at 3726.195 kb on - strand, within PGA1_c35540 at 3726.196 kb on - strand, within PGA1_c35540 at 3726.250 kb on - strand, within PGA1_c35540 at 3726.250 kb on - strand, within PGA1_c35540 at 3726.250 kb on - strand, within PGA1_c35540 at 3726.307 kb on - strand at 3726.308 kb on + strand at 3726.308 kb on + strand at 3726.316 kb on - strand at 3726.339 kb on - strand at 3726.479 kb on + strand at 3726.481 kb on + strand at 3726.516 kb on - strand at 3726.525 kb on + strand at 3726.525 kb on + strand at 3726.533 kb on - strand at 3726.546 kb on - strand at 3726.561 kb on + strand at 3726.569 kb on + strand at 3726.582 kb on - strand at 3726.634 kb on - strand, within PGA1_c35550 at 3726.634 kb on - strand, within PGA1_c35550 at 3726.636 kb on - strand, within PGA1_c35550 at 3726.636 kb on - strand, within PGA1_c35550 at 3726.750 kb on + strand, within PGA1_c35550 at 3726.758 kb on - strand, within PGA1_c35550 at 3726.845 kb on + strand, within PGA1_c35550 at 3726.845 kb on + strand, within PGA1_c35550 at 3726.847 kb on + strand, within PGA1_c35550 at 3726.847 kb on + strand, within PGA1_c35550 at 3726.847 kb on + strand, within PGA1_c35550 at 3726.847 kb on + strand, within PGA1_c35550 at 3726.847 kb on + strand, within PGA1_c35550 at 3726.847 kb on + strand, within PGA1_c35550 at 3726.847 kb on + strand, within PGA1_c35550 at 3726.847 kb on + strand, within PGA1_c35550 at 3726.853 kb on - strand, within PGA1_c35550 at 3726.855 kb on - strand, within PGA1_c35550 at 3726.855 kb on - strand, within PGA1_c35550 at 3726.855 kb on - strand, within PGA1_c35550 at 3726.855 kb on - strand, within PGA1_c35550 at 3726.855 kb on - strand, within PGA1_c35550 at 3726.855 kb on - strand, within PGA1_c35550 at 3726.855 kb on - strand, within PGA1_c35550 at 3726.855 kb on - strand, within PGA1_c35550 at 3726.857 kb on + strand, within PGA1_c35550 at 3726.862 kb on + strand, within PGA1_c35550 at 3726.907 kb on + strand, within PGA1_c35550 at 3726.907 kb on + strand, within PGA1_c35550 at 3726.907 kb on + strand, within PGA1_c35550 at 3726.907 kb on + strand, within PGA1_c35550 at 3726.922 kb on + strand, within PGA1_c35550 at 3726.956 kb on + strand, within PGA1_c35550 at 3726.956 kb on + strand, within PGA1_c35550 at 3726.956 kb on + strand, within PGA1_c35550 at 3726.956 kb on + strand, within PGA1_c35550 at 3726.957 kb on - strand, within PGA1_c35550 at 3726.964 kb on - strand, within PGA1_c35550 at 3726.964 kb on - strand, within PGA1_c35550 at 3726.964 kb on - strand, within PGA1_c35550 at 3726.998 kb on - strand, within PGA1_c35550 at 3727.000 kb on + strand, within PGA1_c35550 at 3727.008 kb on + strand, within PGA1_c35550 at 3727.027 kb on + strand, within PGA1_c35550 at 3727.027 kb on + strand, within PGA1_c35550 at 3727.027 kb on + strand, within PGA1_c35550 at 3727.027 kb on + strand, within PGA1_c35550 at 3727.027 kb on + strand, within PGA1_c35550 at 3727.035 kb on - strand, within PGA1_c35550 at 3727.035 kb on - strand, within PGA1_c35550 at 3727.035 kb on - strand, within PGA1_c35550 at 3727.035 kb on - strand, within PGA1_c35550 at 3727.035 kb on - strand, within PGA1_c35550 at 3727.035 kb on - strand, within PGA1_c35550 at 3727.035 kb on - strand, within PGA1_c35550 at 3727.043 kb on - strand, within PGA1_c35550 at 3727.049 kb on + strand, within PGA1_c35550 at 3727.049 kb on + strand, within PGA1_c35550 at 3727.049 kb on + strand, within PGA1_c35550 at 3727.057 kb on - strand, within PGA1_c35550 at 3727.095 kb on + strand, within PGA1_c35550 at 3727.095 kb on + strand, within PGA1_c35550 at 3727.116 kb on + strand, within PGA1_c35550 at 3727.141 kb on - strand, within PGA1_c35550 at 3727.153 kb on + strand, within PGA1_c35550 at 3727.161 kb on - strand, within PGA1_c35550 at 3727.164 kb on + strand, within PGA1_c35550 at 3727.174 kb on - strand, within PGA1_c35550 at 3727.307 kb on + strand, within PGA1_c35550 at 3727.331 kb on + strand, within PGA1_c35550 at 3727.331 kb on + strand, within PGA1_c35550 at 3727.346 kb on - strand, within PGA1_c35550 at 3727.369 kb on + strand, within PGA1_c35550 at 3727.381 kb on + strand, within PGA1_c35550 at 3727.386 kb on + strand, within PGA1_c35550 at 3727.428 kb on - strand, within PGA1_c35550
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 3,723,839 + PGA1_c35520 0.55 -0.4 3,723,915 + PGA1_c35520 0.60 -0.4 3,723,915 + PGA1_c35520 0.60 -0.6 3,723,923 - PGA1_c35520 0.61 -2.8 3,724,002 - PGA1_c35520 0.66 -0.6 3,724,095 - PGA1_c35520 0.72 -0.2 3,724,290 - PGA1_c35520 0.85 -0.9 3,724,371 + +2.1 3,724,376 + -1.1 3,724,466 + -0.6 3,724,474 - +0.5 3,724,543 + -2.2 3,724,545 - +0.9 3,724,573 + -1.4 3,724,578 + -1.1 3,724,578 + +0.0 3,724,581 - -0.3 3,724,581 - +1.0 3,724,588 + -0.2 3,724,591 - +0.6 3,724,644 - PGA1_c35530 0.68 -0.4 3,724,709 - -2.5 3,724,724 + +1.2 3,724,802 + -0.1 3,724,815 - +1.0 3,724,834 - +0.9 3,724,852 - -0.5 3,724,925 + +1.8 3,725,019 - PGA1_c35540 0.13 -2.3 3,725,062 + PGA1_c35540 0.15 -1.2 3,725,062 + PGA1_c35540 0.15 +1.2 3,725,062 + PGA1_c35540 0.15 -0.9 3,725,062 + PGA1_c35540 0.15 +0.3 3,725,068 + PGA1_c35540 0.16 +0.3 3,725,068 + PGA1_c35540 0.16 -0.1 3,725,128 - PGA1_c35540 0.19 -0.4 3,725,137 + PGA1_c35540 0.20 +0.6 3,725,137 + PGA1_c35540 0.20 +0.0 3,725,137 + PGA1_c35540 0.20 -2.5 3,725,144 + PGA1_c35540 0.20 +0.6 3,725,152 - PGA1_c35540 0.21 +1.6 3,725,364 + PGA1_c35540 0.34 -0.2 3,725,372 - PGA1_c35540 0.35 +1.4 3,725,401 + PGA1_c35540 0.36 +0.2 3,725,417 - PGA1_c35540 0.37 +0.7 3,725,417 - PGA1_c35540 0.37 +1.7 3,725,417 - PGA1_c35540 0.37 +1.4 3,725,464 + PGA1_c35540 0.40 +0.4 3,725,481 + PGA1_c35540 0.41 +1.5 3,725,489 - PGA1_c35540 0.42 +1.2 3,725,528 + PGA1_c35540 0.44 +1.0 3,725,531 - PGA1_c35540 0.44 -1.6 3,725,548 + PGA1_c35540 0.45 -0.0 3,725,548 + PGA1_c35540 0.45 -0.4 3,725,556 - PGA1_c35540 0.46 -0.4 3,725,619 + PGA1_c35540 0.50 -2.4 3,725,679 + PGA1_c35540 0.54 +0.0 3,725,679 + PGA1_c35540 0.54 -0.3 3,725,679 + PGA1_c35540 0.54 +1.0 3,725,679 + PGA1_c35540 0.54 -2.9 3,725,687 - PGA1_c35540 0.54 -2.4 3,725,733 - PGA1_c35540 0.57 +0.9 3,725,768 - PGA1_c35540 0.59 +1.4 3,725,862 - PGA1_c35540 0.65 -0.3 3,725,896 - PGA1_c35540 0.67 +0.4 3,725,899 - PGA1_c35540 0.67 -1.2 3,725,964 - PGA1_c35540 0.71 +0.9 3,726,007 + PGA1_c35540 0.74 -0.6 3,726,007 + PGA1_c35540 0.74 +0.4 3,726,010 - PGA1_c35540 0.74 +0.6 3,726,017 + PGA1_c35540 0.74 +0.8 3,726,024 + PGA1_c35540 0.75 +0.1 3,726,054 + PGA1_c35540 0.77 +1.0 3,726,087 + PGA1_c35540 0.79 +0.8 3,726,087 + PGA1_c35540 0.79 +0.3 3,726,087 + PGA1_c35540 0.79 +0.2 3,726,087 + PGA1_c35540 0.79 +0.4 3,726,087 + PGA1_c35540 0.79 +0.4 3,726,087 + PGA1_c35540 0.79 +0.6 3,726,087 + PGA1_c35540 0.79 +0.2 3,726,087 + PGA1_c35540 0.79 +0.5 3,726,087 + PGA1_c35540 0.79 -0.3 3,726,087 + PGA1_c35540 0.79 +0.6 3,726,087 + PGA1_c35540 0.79 +1.1 3,726,087 + PGA1_c35540 0.79 -0.4 3,726,087 + PGA1_c35540 0.79 +0.2 3,726,087 + PGA1_c35540 0.79 +0.4 3,726,087 + PGA1_c35540 0.79 +1.1 3,726,087 + PGA1_c35540 0.79 -0.2 3,726,087 + PGA1_c35540 0.79 +0.2 3,726,095 - PGA1_c35540 0.79 +0.4 3,726,095 - PGA1_c35540 0.79 +1.5 3,726,095 - PGA1_c35540 0.79 -1.8 3,726,095 - PGA1_c35540 0.79 -0.7 3,726,095 - PGA1_c35540 0.79 +2.1 3,726,095 - PGA1_c35540 0.79 -0.3 3,726,095 - PGA1_c35540 0.79 -2.2 3,726,095 - PGA1_c35540 0.79 -1.7 3,726,095 - PGA1_c35540 0.79 -0.6 3,726,095 - PGA1_c35540 0.79 -0.3 3,726,095 - PGA1_c35540 0.79 -0.4 3,726,095 - PGA1_c35540 0.79 +0.9 3,726,095 - PGA1_c35540 0.79 +1.5 3,726,187 + PGA1_c35540 0.85 -0.5 3,726,195 - PGA1_c35540 0.85 +0.5 3,726,196 - PGA1_c35540 0.86 +0.7 3,726,250 - PGA1_c35540 0.89 -0.1 3,726,250 - PGA1_c35540 0.89 -2.0 3,726,250 - PGA1_c35540 0.89 -2.3 3,726,307 - +0.1 3,726,308 + +2.4 3,726,308 + -0.3 3,726,316 - -0.3 3,726,339 - -0.2 3,726,479 + -0.1 3,726,481 + -0.1 3,726,516 - +0.3 3,726,525 + +0.1 3,726,525 + +0.3 3,726,533 - +1.4 3,726,546 - -1.1 3,726,561 + -1.1 3,726,569 + -1.1 3,726,582 - +0.2 3,726,634 - PGA1_c35550 0.11 -0.1 3,726,634 - PGA1_c35550 0.11 -0.7 3,726,636 - PGA1_c35550 0.11 -1.1 3,726,636 - PGA1_c35550 0.11 -0.2 3,726,750 + PGA1_c35550 0.18 -0.0 3,726,758 - PGA1_c35550 0.19 +0.6 3,726,845 + PGA1_c35550 0.24 +1.4 3,726,845 + PGA1_c35550 0.24 -0.4 3,726,847 + PGA1_c35550 0.24 -0.0 3,726,847 + PGA1_c35550 0.24 +0.8 3,726,847 + PGA1_c35550 0.24 -1.1 3,726,847 + PGA1_c35550 0.24 -0.8 3,726,847 + PGA1_c35550 0.24 -0.4 3,726,847 + PGA1_c35550 0.24 -0.6 3,726,847 + PGA1_c35550 0.24 +1.4 3,726,847 + PGA1_c35550 0.24 +0.4 3,726,853 - PGA1_c35550 0.25 +0.2 3,726,855 - PGA1_c35550 0.25 -0.1 3,726,855 - PGA1_c35550 0.25 -2.5 3,726,855 - PGA1_c35550 0.25 +2.6 3,726,855 - PGA1_c35550 0.25 +2.4 3,726,855 - PGA1_c35550 0.25 +1.4 3,726,855 - PGA1_c35550 0.25 -1.4 3,726,855 - PGA1_c35550 0.25 +0.1 3,726,855 - PGA1_c35550 0.25 +0.2 3,726,857 + PGA1_c35550 0.25 +0.1 3,726,862 + PGA1_c35550 0.25 +2.2 3,726,907 + PGA1_c35550 0.28 -1.5 3,726,907 + PGA1_c35550 0.28 +0.6 3,726,907 + PGA1_c35550 0.28 -0.9 3,726,907 + PGA1_c35550 0.28 -1.3 3,726,922 + PGA1_c35550 0.29 -0.2 3,726,956 + PGA1_c35550 0.31 +0.2 3,726,956 + PGA1_c35550 0.31 -0.7 3,726,956 + PGA1_c35550 0.31 +1.5 3,726,956 + PGA1_c35550 0.31 +0.9 3,726,957 - PGA1_c35550 0.31 -0.5 3,726,964 - PGA1_c35550 0.31 +2.0 3,726,964 - PGA1_c35550 0.31 -0.4 3,726,964 - PGA1_c35550 0.31 -0.1 3,726,998 - PGA1_c35550 0.34 -0.9 3,727,000 + PGA1_c35550 0.34 +0.7 3,727,008 + PGA1_c35550 0.34 -0.1 3,727,027 + PGA1_c35550 0.35 -1.5 3,727,027 + PGA1_c35550 0.35 +0.6 3,727,027 + PGA1_c35550 0.35 +0.1 3,727,027 + PGA1_c35550 0.35 -0.1 3,727,027 + PGA1_c35550 0.35 -0.5 3,727,035 - PGA1_c35550 0.36 -2.1 3,727,035 - PGA1_c35550 0.36 +0.7 3,727,035 - PGA1_c35550 0.36 -0.2 3,727,035 - PGA1_c35550 0.36 -0.3 3,727,035 - PGA1_c35550 0.36 -0.4 3,727,035 - PGA1_c35550 0.36 +0.7 3,727,035 - PGA1_c35550 0.36 -0.3 3,727,043 - PGA1_c35550 0.36 +0.4 3,727,049 + PGA1_c35550 0.37 +0.9 3,727,049 + PGA1_c35550 0.37 -0.5 3,727,049 + PGA1_c35550 0.37 +0.1 3,727,057 - PGA1_c35550 0.37 +1.1 3,727,095 + PGA1_c35550 0.40 +0.1 3,727,095 + PGA1_c35550 0.40 -0.8 3,727,116 + PGA1_c35550 0.41 -2.5 3,727,141 - PGA1_c35550 0.42 +0.4 3,727,153 + PGA1_c35550 0.43 -1.3 3,727,161 - PGA1_c35550 0.44 -0.9 3,727,164 + PGA1_c35550 0.44 -1.3 3,727,174 - PGA1_c35550 0.44 -0.2 3,727,307 + PGA1_c35550 0.53 +0.2 3,727,331 + PGA1_c35550 0.54 -0.4 3,727,331 + PGA1_c35550 0.54 -1.2 3,727,346 - PGA1_c35550 0.55 +0.3 3,727,369 + PGA1_c35550 0.56 -0.5 3,727,381 + PGA1_c35550 0.57 +0.4 3,727,386 + PGA1_c35550 0.57 +1.8 3,727,428 - PGA1_c35550 0.60 -2.4
Or see this region's nucleotide sequence