Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c26600 and PGA1_c26610 are separated by 64 nucleotides PGA1_c26610 and PGA1_c26620 are separated by 33 nucleotides PGA1_c26620 and PGA1_c26630 overlap by 1 nucleotides PGA1_c26630 and PGA1_c26640 are separated by 42 nucleotides
PGA1_c26600: PGA1_c26600 - amino acid ABC transporter, permease protein, at 2,775,636 to 2,776,457
_c26600
PGA1_c26610: PGA1_c26610 - amino acid ABC transporter, substrate-binding protein, at 2,776,522 to 2,777,334
_c26610
PGA1_c26620: PGA1_c26620 - putative molybdopterin biosynthesis protein MoeB, at 2,777,368 to 2,778,504
_c26620
PGA1_c26630: PGA1_c26630 - deoxyuridine 5'-triphosphate nucleotidohydrolase Dut, at 2,778,504 to 2,778,959
_c26630
PGA1_c26640: PGA1_c26640 - coenzyme A biosynthesis bifunctional protein CoaBC, at 2,779,002 to 2,780,204
_c26640
Position (kb)
2777
2778
2779 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2776.429 kb on - strand at 2776.436 kb on + strand at 2776.439 kb on - strand at 2776.450 kb on - strand at 2776.465 kb on - strand at 2776.504 kb on + strand at 2776.514 kb on + strand at 2776.522 kb on - strand at 2776.566 kb on + strand at 2776.577 kb on + strand at 2776.583 kb on + strand at 2776.583 kb on + strand at 2776.607 kb on - strand, within PGA1_c26610 at 2776.625 kb on + strand, within PGA1_c26610 at 2776.650 kb on - strand, within PGA1_c26610 at 2776.656 kb on + strand, within PGA1_c26610 at 2776.661 kb on + strand, within PGA1_c26610 at 2776.702 kb on + strand, within PGA1_c26610 at 2776.710 kb on - strand, within PGA1_c26610 at 2776.819 kb on + strand, within PGA1_c26610 at 2776.826 kb on - strand, within PGA1_c26610 at 2776.873 kb on - strand, within PGA1_c26610 at 2776.873 kb on - strand, within PGA1_c26610 at 2776.873 kb on - strand, within PGA1_c26610 at 2776.873 kb on - strand, within PGA1_c26610 at 2777.158 kb on - strand, within PGA1_c26610 at 2777.170 kb on - strand, within PGA1_c26610 at 2777.237 kb on - strand, within PGA1_c26610 at 2777.237 kb on - strand, within PGA1_c26610 at 2777.288 kb on - strand at 2777.341 kb on - strand at 2777.375 kb on - strand at 2777.413 kb on + strand at 2777.450 kb on + strand at 2777.451 kb on + strand at 2777.459 kb on - strand at 2777.459 kb on - strand at 2777.533 kb on + strand, within PGA1_c26620 at 2777.554 kb on + strand, within PGA1_c26620 at 2777.554 kb on + strand, within PGA1_c26620 at 2777.554 kb on + strand, within PGA1_c26620 at 2777.562 kb on - strand, within PGA1_c26620 at 2777.562 kb on - strand, within PGA1_c26620 at 2777.562 kb on - strand, within PGA1_c26620 at 2777.562 kb on - strand, within PGA1_c26620 at 2777.615 kb on - strand, within PGA1_c26620 at 2777.781 kb on + strand, within PGA1_c26620 at 2777.928 kb on + strand, within PGA1_c26620 at 2778.036 kb on + strand, within PGA1_c26620 at 2778.044 kb on - strand, within PGA1_c26620 at 2778.044 kb on - strand, within PGA1_c26620 at 2778.059 kb on - strand, within PGA1_c26620 at 2778.138 kb on + strand, within PGA1_c26620 at 2778.141 kb on - strand, within PGA1_c26620 at 2778.226 kb on - strand, within PGA1_c26620 at 2778.239 kb on - strand, within PGA1_c26620 at 2778.265 kb on - strand, within PGA1_c26620 at 2778.265 kb on - strand, within PGA1_c26620 at 2778.413 kb on + strand at 2778.449 kb on - strand at 2778.472 kb on + strand at 2778.510 kb on - strand at 2778.520 kb on - strand at 2778.598 kb on + strand, within PGA1_c26630 at 2778.606 kb on - strand, within PGA1_c26630 at 2778.606 kb on - strand, within PGA1_c26630 at 2778.662 kb on + strand, within PGA1_c26630 at 2778.775 kb on - strand, within PGA1_c26630 at 2778.775 kb on - strand, within PGA1_c26630 at 2778.775 kb on - strand, within PGA1_c26630 at 2778.810 kb on - strand, within PGA1_c26630 at 2778.833 kb on + strand, within PGA1_c26630 at 2778.835 kb on - strand, within PGA1_c26630 at 2778.869 kb on + strand, within PGA1_c26630 at 2778.911 kb on + strand, within PGA1_c26630 at 2778.911 kb on + strand, within PGA1_c26630 at 2778.932 kb on + strand at 2778.966 kb on + strand at 2778.966 kb on + strand at 2778.974 kb on - strand at 2779.008 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 2,776,429 - +0.4 2,776,436 + -0.6 2,776,439 - +0.9 2,776,450 - -0.5 2,776,465 - -0.1 2,776,504 + +0.6 2,776,514 + -3.6 2,776,522 - -0.7 2,776,566 + +0.0 2,776,577 + +0.8 2,776,583 + +1.6 2,776,583 + -0.6 2,776,607 - PGA1_c26610 0.10 -0.7 2,776,625 + PGA1_c26610 0.13 +0.6 2,776,650 - PGA1_c26610 0.16 +2.3 2,776,656 + PGA1_c26610 0.16 -1.0 2,776,661 + PGA1_c26610 0.17 -0.3 2,776,702 + PGA1_c26610 0.22 -0.8 2,776,710 - PGA1_c26610 0.23 +0.4 2,776,819 + PGA1_c26610 0.37 -1.6 2,776,826 - PGA1_c26610 0.37 +0.3 2,776,873 - PGA1_c26610 0.43 +1.2 2,776,873 - PGA1_c26610 0.43 -0.0 2,776,873 - PGA1_c26610 0.43 -1.6 2,776,873 - PGA1_c26610 0.43 -0.3 2,777,158 - PGA1_c26610 0.78 +0.8 2,777,170 - PGA1_c26610 0.80 -1.1 2,777,237 - PGA1_c26610 0.88 +1.7 2,777,237 - PGA1_c26610 0.88 +0.0 2,777,288 - -2.5 2,777,341 - -2.3 2,777,375 - -0.1 2,777,413 + +2.2 2,777,450 + -0.2 2,777,451 + -0.2 2,777,459 - -0.2 2,777,459 - +0.4 2,777,533 + PGA1_c26620 0.15 +1.6 2,777,554 + PGA1_c26620 0.16 -2.3 2,777,554 + PGA1_c26620 0.16 +1.3 2,777,554 + PGA1_c26620 0.16 -1.3 2,777,562 - PGA1_c26620 0.17 -1.2 2,777,562 - PGA1_c26620 0.17 -0.6 2,777,562 - PGA1_c26620 0.17 -1.2 2,777,562 - PGA1_c26620 0.17 -0.8 2,777,615 - PGA1_c26620 0.22 +0.4 2,777,781 + PGA1_c26620 0.36 -1.2 2,777,928 + PGA1_c26620 0.49 +0.0 2,778,036 + PGA1_c26620 0.59 -0.6 2,778,044 - PGA1_c26620 0.59 +0.4 2,778,044 - PGA1_c26620 0.59 -1.0 2,778,059 - PGA1_c26620 0.61 -0.1 2,778,138 + PGA1_c26620 0.68 +2.8 2,778,141 - PGA1_c26620 0.68 +0.4 2,778,226 - PGA1_c26620 0.75 +0.5 2,778,239 - PGA1_c26620 0.77 -0.5 2,778,265 - PGA1_c26620 0.79 -1.6 2,778,265 - PGA1_c26620 0.79 +0.8 2,778,413 + +1.4 2,778,449 - -2.1 2,778,472 + -1.4 2,778,510 - +2.5 2,778,520 - -1.5 2,778,598 + PGA1_c26630 0.21 +0.2 2,778,606 - PGA1_c26630 0.22 +0.1 2,778,606 - PGA1_c26630 0.22 +1.8 2,778,662 + PGA1_c26630 0.35 -1.1 2,778,775 - PGA1_c26630 0.59 -1.3 2,778,775 - PGA1_c26630 0.59 -0.8 2,778,775 - PGA1_c26630 0.59 -0.5 2,778,810 - PGA1_c26630 0.67 -1.6 2,778,833 + PGA1_c26630 0.72 -1.3 2,778,835 - PGA1_c26630 0.73 -0.3 2,778,869 + PGA1_c26630 0.80 -0.2 2,778,911 + PGA1_c26630 0.89 -2.3 2,778,911 + PGA1_c26630 0.89 -2.0 2,778,932 + -3.1 2,778,966 + +0.0 2,778,966 + -0.4 2,778,974 - -3.2 2,779,008 - +0.3
Or see this region's nucleotide sequence