Experiment: m.b. Furfuryl Alcohol 0.064 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c15430 and PGA1_c15440 are separated by 170 nucleotides PGA1_c15440 and PGA1_c15450 are separated by 173 nucleotides PGA1_c15450 and PGA1_c15460 are separated by 120 nucleotides
PGA1_c15430: PGA1_c15430 - cysteine desulfurase SufS, at 1,605,946 to 1,607,166
_c15430
PGA1_c15440: PGA1_c15440 - Predicted O-linked N-acetylglucosamine transferase, SPINDLY family, at 1,607,337 to 1,608,995
_c15440
PGA1_c15450: PGA1_c15450 - tRNA-Ser, at 1,609,169 to 1,609,258
_c15450
PGA1_c15460: PGA1_c15460 - hypothetical protein, at 1,609,379 to 1,610,230
_c15460
Position (kb)
1607
1608
1609 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1607.200 kb on + strand at 1607.208 kb on - strand at 1607.210 kb on + strand at 1607.210 kb on + strand at 1607.212 kb on - strand at 1607.216 kb on + strand at 1607.218 kb on - strand at 1607.218 kb on - strand at 1607.224 kb on - strand at 1607.243 kb on + strand at 1607.348 kb on - strand at 1607.413 kb on + strand at 1607.436 kb on + strand at 1607.452 kb on - strand at 1607.454 kb on - strand at 1607.493 kb on + strand at 1607.501 kb on - strand at 1607.537 kb on + strand, within PGA1_c15440 at 1607.537 kb on + strand, within PGA1_c15440 at 1607.545 kb on - strand, within PGA1_c15440 at 1607.554 kb on - strand, within PGA1_c15440 at 1607.581 kb on + strand, within PGA1_c15440 at 1607.685 kb on + strand, within PGA1_c15440 at 1607.690 kb on + strand, within PGA1_c15440 at 1607.690 kb on + strand, within PGA1_c15440 at 1607.750 kb on + strand, within PGA1_c15440 at 1607.764 kb on - strand, within PGA1_c15440 at 1607.795 kb on + strand, within PGA1_c15440 at 1607.800 kb on + strand, within PGA1_c15440 at 1607.809 kb on + strand, within PGA1_c15440 at 1607.878 kb on - strand, within PGA1_c15440 at 1607.878 kb on - strand, within PGA1_c15440 at 1607.882 kb on + strand, within PGA1_c15440 at 1607.941 kb on + strand, within PGA1_c15440 at 1607.941 kb on + strand, within PGA1_c15440 at 1607.944 kb on - strand, within PGA1_c15440 at 1607.955 kb on + strand, within PGA1_c15440 at 1607.965 kb on - strand, within PGA1_c15440 at 1608.003 kb on - strand, within PGA1_c15440 at 1608.003 kb on - strand, within PGA1_c15440 at 1608.003 kb on - strand, within PGA1_c15440 at 1608.013 kb on - strand, within PGA1_c15440 at 1608.022 kb on + strand, within PGA1_c15440 at 1608.069 kb on + strand, within PGA1_c15440 at 1608.094 kb on + strand, within PGA1_c15440 at 1608.131 kb on + strand, within PGA1_c15440 at 1608.131 kb on + strand, within PGA1_c15440 at 1608.131 kb on + strand, within PGA1_c15440 at 1608.139 kb on - strand, within PGA1_c15440 at 1608.139 kb on - strand, within PGA1_c15440 at 1608.139 kb on - strand, within PGA1_c15440 at 1608.178 kb on + strand, within PGA1_c15440 at 1608.256 kb on + strand, within PGA1_c15440 at 1608.261 kb on + strand, within PGA1_c15440 at 1608.269 kb on - strand, within PGA1_c15440 at 1608.291 kb on + strand, within PGA1_c15440 at 1608.359 kb on - strand, within PGA1_c15440 at 1608.365 kb on + strand, within PGA1_c15440 at 1608.370 kb on + strand, within PGA1_c15440 at 1608.370 kb on + strand, within PGA1_c15440 at 1608.370 kb on + strand, within PGA1_c15440 at 1608.370 kb on + strand, within PGA1_c15440 at 1608.370 kb on + strand, within PGA1_c15440 at 1608.370 kb on + strand, within PGA1_c15440 at 1608.370 kb on + strand, within PGA1_c15440 at 1608.370 kb on + strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.378 kb on - strand, within PGA1_c15440 at 1608.388 kb on + strand, within PGA1_c15440 at 1608.432 kb on - strand, within PGA1_c15440 at 1608.432 kb on - strand, within PGA1_c15440 at 1608.432 kb on - strand, within PGA1_c15440 at 1608.432 kb on - strand, within PGA1_c15440 at 1608.451 kb on - strand, within PGA1_c15440 at 1608.457 kb on + strand, within PGA1_c15440 at 1608.457 kb on + strand, within PGA1_c15440 at 1608.465 kb on - strand, within PGA1_c15440 at 1608.473 kb on - strand, within PGA1_c15440 at 1608.496 kb on - strand, within PGA1_c15440 at 1608.498 kb on + strand, within PGA1_c15440 at 1608.501 kb on + strand, within PGA1_c15440 at 1608.510 kb on - strand, within PGA1_c15440 at 1608.510 kb on - strand, within PGA1_c15440 at 1608.510 kb on - strand, within PGA1_c15440 at 1608.510 kb on - strand, within PGA1_c15440 at 1608.523 kb on + strand, within PGA1_c15440 at 1608.526 kb on - strand, within PGA1_c15440 at 1608.528 kb on + strand, within PGA1_c15440 at 1608.545 kb on + strand, within PGA1_c15440 at 1608.545 kb on + strand, within PGA1_c15440 at 1608.545 kb on + strand, within PGA1_c15440 at 1608.545 kb on + strand, within PGA1_c15440 at 1608.545 kb on + strand, within PGA1_c15440 at 1608.545 kb on + strand, within PGA1_c15440 at 1608.545 kb on + strand, within PGA1_c15440 at 1608.553 kb on - strand, within PGA1_c15440 at 1608.553 kb on - strand, within PGA1_c15440 at 1608.553 kb on - strand, within PGA1_c15440 at 1608.553 kb on - strand, within PGA1_c15440 at 1608.553 kb on - strand, within PGA1_c15440 at 1608.588 kb on - strand, within PGA1_c15440 at 1608.588 kb on - strand, within PGA1_c15440 at 1608.609 kb on - strand, within PGA1_c15440 at 1608.634 kb on + strand, within PGA1_c15440 at 1608.642 kb on - strand, within PGA1_c15440 at 1608.772 kb on + strand, within PGA1_c15440 at 1608.772 kb on + strand, within PGA1_c15440 at 1608.780 kb on - strand, within PGA1_c15440 at 1608.785 kb on - strand, within PGA1_c15440 at 1608.785 kb on - strand, within PGA1_c15440 at 1608.791 kb on + strand, within PGA1_c15440 at 1608.797 kb on + strand, within PGA1_c15440 at 1608.799 kb on - strand, within PGA1_c15440 at 1608.876 kb on - strand at 1608.876 kb on - strand at 1608.876 kb on - strand at 1608.949 kb on + strand at 1608.951 kb on + strand at 1608.959 kb on - strand at 1609.003 kb on + strand at 1609.003 kb on + strand at 1609.003 kb on - strand at 1609.011 kb on - strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.051 kb on + strand at 1609.058 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.059 kb on - strand at 1609.137 kb on + strand at 1609.137 kb on + strand at 1609.137 kb on + strand at 1609.145 kb on - strand at 1609.145 kb on - strand at 1609.145 kb on - strand at 1609.377 kb on - strand at 1609.423 kb on + strand at 1609.428 kb on + strand at 1609.475 kb on + strand, within PGA1_c15460 at 1609.480 kb on + strand, within PGA1_c15460 at 1609.483 kb on - strand, within PGA1_c15460 at 1609.502 kb on - strand, within PGA1_c15460 at 1609.513 kb on + strand, within PGA1_c15460 at 1609.520 kb on - strand, within PGA1_c15460 at 1609.523 kb on + strand, within PGA1_c15460 at 1609.531 kb on + strand, within PGA1_c15460 at 1609.531 kb on - strand, within PGA1_c15460 at 1609.531 kb on - strand, within PGA1_c15460 at 1609.531 kb on - strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.533 kb on + strand, within PGA1_c15460 at 1609.536 kb on - strand, within PGA1_c15460 at 1609.536 kb on - strand, within PGA1_c15460 at 1609.541 kb on - strand, within PGA1_c15460 at 1609.541 kb on - strand, within PGA1_c15460 at 1609.541 kb on - strand, within PGA1_c15460 at 1609.541 kb on - strand, within PGA1_c15460 at 1609.541 kb on - strand, within PGA1_c15460 at 1609.689 kb on + strand, within PGA1_c15460 at 1609.693 kb on + strand, within PGA1_c15460 at 1609.700 kb on - strand, within PGA1_c15460 at 1609.701 kb on - strand, within PGA1_c15460 at 1609.708 kb on + strand, within PGA1_c15460 at 1609.708 kb on + strand, within PGA1_c15460 at 1609.716 kb on - strand, within PGA1_c15460 at 1609.804 kb on - strand, within PGA1_c15460 at 1609.889 kb on + strand, within PGA1_c15460 at 1609.897 kb on - strand, within PGA1_c15460
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Furfuryl Alcohol 0.064 vol% remove 1,607,200 + -0.7 1,607,208 - +0.6 1,607,210 + -0.9 1,607,210 + +1.7 1,607,212 - -2.2 1,607,216 + -1.0 1,607,218 - +0.8 1,607,218 - -0.0 1,607,224 - +0.2 1,607,243 + -0.4 1,607,348 - -0.1 1,607,413 + -0.8 1,607,436 + +2.0 1,607,452 - -0.8 1,607,454 - +0.3 1,607,493 + -0.9 1,607,501 - -0.4 1,607,537 + PGA1_c15440 0.12 -1.4 1,607,537 + PGA1_c15440 0.12 +0.1 1,607,545 - PGA1_c15440 0.13 +0.4 1,607,554 - PGA1_c15440 0.13 +0.3 1,607,581 + PGA1_c15440 0.15 -0.8 1,607,685 + PGA1_c15440 0.21 -0.0 1,607,690 + PGA1_c15440 0.21 +0.4 1,607,690 + PGA1_c15440 0.21 -2.8 1,607,750 + PGA1_c15440 0.25 -0.2 1,607,764 - PGA1_c15440 0.26 +1.2 1,607,795 + PGA1_c15440 0.28 +0.3 1,607,800 + PGA1_c15440 0.28 +1.6 1,607,809 + PGA1_c15440 0.28 -0.8 1,607,878 - PGA1_c15440 0.33 +0.6 1,607,878 - PGA1_c15440 0.33 -0.2 1,607,882 + PGA1_c15440 0.33 -2.6 1,607,941 + PGA1_c15440 0.36 -1.2 1,607,941 + PGA1_c15440 0.36 +1.1 1,607,944 - PGA1_c15440 0.37 +0.6 1,607,955 + PGA1_c15440 0.37 +1.8 1,607,965 - PGA1_c15440 0.38 +0.3 1,608,003 - PGA1_c15440 0.40 +0.2 1,608,003 - PGA1_c15440 0.40 +1.3 1,608,003 - PGA1_c15440 0.40 +0.5 1,608,013 - PGA1_c15440 0.41 +1.2 1,608,022 + PGA1_c15440 0.41 -1.0 1,608,069 + PGA1_c15440 0.44 +1.8 1,608,094 + PGA1_c15440 0.46 -0.4 1,608,131 + PGA1_c15440 0.48 +0.4 1,608,131 + PGA1_c15440 0.48 -1.3 1,608,131 + PGA1_c15440 0.48 +1.1 1,608,139 - PGA1_c15440 0.48 +0.9 1,608,139 - PGA1_c15440 0.48 +1.1 1,608,139 - PGA1_c15440 0.48 -0.2 1,608,178 + PGA1_c15440 0.51 +2.3 1,608,256 + PGA1_c15440 0.55 -0.6 1,608,261 + PGA1_c15440 0.56 +0.1 1,608,269 - PGA1_c15440 0.56 -1.6 1,608,291 + PGA1_c15440 0.58 +0.5 1,608,359 - PGA1_c15440 0.62 +0.5 1,608,365 + PGA1_c15440 0.62 -0.1 1,608,370 + PGA1_c15440 0.62 +1.2 1,608,370 + PGA1_c15440 0.62 +0.4 1,608,370 + PGA1_c15440 0.62 -0.3 1,608,370 + PGA1_c15440 0.62 -1.5 1,608,370 + PGA1_c15440 0.62 -0.1 1,608,370 + PGA1_c15440 0.62 +1.3 1,608,370 + PGA1_c15440 0.62 -0.6 1,608,370 + PGA1_c15440 0.62 +0.8 1,608,378 - PGA1_c15440 0.63 -1.1 1,608,378 - PGA1_c15440 0.63 -0.7 1,608,378 - PGA1_c15440 0.63 +0.1 1,608,378 - PGA1_c15440 0.63 +0.1 1,608,378 - PGA1_c15440 0.63 +0.7 1,608,378 - PGA1_c15440 0.63 +0.4 1,608,378 - PGA1_c15440 0.63 -0.2 1,608,378 - PGA1_c15440 0.63 -0.4 1,608,378 - PGA1_c15440 0.63 -0.9 1,608,378 - PGA1_c15440 0.63 +1.6 1,608,378 - PGA1_c15440 0.63 +0.8 1,608,378 - PGA1_c15440 0.63 +0.8 1,608,378 - PGA1_c15440 0.63 -1.6 1,608,378 - PGA1_c15440 0.63 +1.0 1,608,378 - PGA1_c15440 0.63 +1.4 1,608,378 - PGA1_c15440 0.63 +1.1 1,608,378 - PGA1_c15440 0.63 -1.0 1,608,378 - PGA1_c15440 0.63 -0.9 1,608,388 + PGA1_c15440 0.63 +0.3 1,608,432 - PGA1_c15440 0.66 -1.5 1,608,432 - PGA1_c15440 0.66 +0.5 1,608,432 - PGA1_c15440 0.66 +0.7 1,608,432 - PGA1_c15440 0.66 -0.1 1,608,451 - PGA1_c15440 0.67 +1.1 1,608,457 + PGA1_c15440 0.68 -0.3 1,608,457 + PGA1_c15440 0.68 -0.2 1,608,465 - PGA1_c15440 0.68 +2.0 1,608,473 - PGA1_c15440 0.68 -0.4 1,608,496 - PGA1_c15440 0.70 -0.2 1,608,498 + PGA1_c15440 0.70 +0.5 1,608,501 + PGA1_c15440 0.70 -0.1 1,608,510 - PGA1_c15440 0.71 -1.8 1,608,510 - PGA1_c15440 0.71 +2.1 1,608,510 - PGA1_c15440 0.71 -2.6 1,608,510 - PGA1_c15440 0.71 +0.9 1,608,523 + PGA1_c15440 0.71 -0.9 1,608,526 - PGA1_c15440 0.72 -1.0 1,608,528 + PGA1_c15440 0.72 -1.4 1,608,545 + PGA1_c15440 0.73 +0.1 1,608,545 + PGA1_c15440 0.73 +0.5 1,608,545 + PGA1_c15440 0.73 +0.0 1,608,545 + PGA1_c15440 0.73 +0.5 1,608,545 + PGA1_c15440 0.73 +0.7 1,608,545 + PGA1_c15440 0.73 -0.9 1,608,545 + PGA1_c15440 0.73 +0.5 1,608,553 - PGA1_c15440 0.73 +1.0 1,608,553 - PGA1_c15440 0.73 +1.0 1,608,553 - PGA1_c15440 0.73 +0.8 1,608,553 - PGA1_c15440 0.73 +0.4 1,608,553 - PGA1_c15440 0.73 -1.1 1,608,588 - PGA1_c15440 0.75 +1.1 1,608,588 - PGA1_c15440 0.75 +3.1 1,608,609 - PGA1_c15440 0.77 +1.0 1,608,634 + PGA1_c15440 0.78 -1.5 1,608,642 - PGA1_c15440 0.79 -0.0 1,608,772 + PGA1_c15440 0.86 +0.2 1,608,772 + PGA1_c15440 0.86 -1.5 1,608,780 - PGA1_c15440 0.87 +0.8 1,608,785 - PGA1_c15440 0.87 +0.4 1,608,785 - PGA1_c15440 0.87 +0.2 1,608,791 + PGA1_c15440 0.88 -2.5 1,608,797 + PGA1_c15440 0.88 +0.3 1,608,799 - PGA1_c15440 0.88 +0.9 1,608,876 - -0.4 1,608,876 - +0.8 1,608,876 - +0.2 1,608,949 + +0.7 1,608,951 + -0.9 1,608,959 - -0.2 1,609,003 + -1.2 1,609,003 + -1.2 1,609,003 - +0.2 1,609,011 - +0.6 1,609,051 + -2.4 1,609,051 + +0.8 1,609,051 + -0.6 1,609,051 + -0.4 1,609,051 + -0.0 1,609,051 + +1.4 1,609,051 + +0.2 1,609,051 + +0.0 1,609,051 + +0.7 1,609,051 + +0.7 1,609,058 - -0.3 1,609,059 - +1.1 1,609,059 - +1.3 1,609,059 - +1.9 1,609,059 - -1.0 1,609,059 - -0.0 1,609,059 - -0.4 1,609,059 - -0.5 1,609,059 - +0.3 1,609,059 - +0.7 1,609,059 - +0.1 1,609,059 - -0.9 1,609,059 - -0.3 1,609,059 - -0.8 1,609,059 - -0.4 1,609,059 - -1.2 1,609,059 - -0.1 1,609,059 - -0.3 1,609,059 - -0.9 1,609,059 - +1.0 1,609,059 - +1.2 1,609,059 - -1.2 1,609,059 - +0.2 1,609,059 - +1.8 1,609,137 + +0.3 1,609,137 + -0.5 1,609,137 + +0.2 1,609,145 - -0.0 1,609,145 - -2.2 1,609,145 - +0.9 1,609,377 - -0.3 1,609,423 + +0.1 1,609,428 + +2.4 1,609,475 + PGA1_c15460 0.11 +0.8 1,609,480 + PGA1_c15460 0.12 +1.0 1,609,483 - PGA1_c15460 0.12 +1.4 1,609,502 - PGA1_c15460 0.14 -0.8 1,609,513 + PGA1_c15460 0.16 +1.3 1,609,520 - PGA1_c15460 0.17 +0.8 1,609,523 + PGA1_c15460 0.17 -0.6 1,609,531 + PGA1_c15460 0.18 +0.1 1,609,531 - PGA1_c15460 0.18 +0.0 1,609,531 - PGA1_c15460 0.18 -0.5 1,609,531 - PGA1_c15460 0.18 +0.4 1,609,533 + PGA1_c15460 0.18 +0.5 1,609,533 + PGA1_c15460 0.18 -1.4 1,609,533 + PGA1_c15460 0.18 -1.5 1,609,533 + PGA1_c15460 0.18 -0.0 1,609,533 + PGA1_c15460 0.18 +4.3 1,609,533 + PGA1_c15460 0.18 +0.2 1,609,533 + PGA1_c15460 0.18 +0.0 1,609,533 + PGA1_c15460 0.18 -0.0 1,609,533 + PGA1_c15460 0.18 +0.6 1,609,533 + PGA1_c15460 0.18 -2.3 1,609,536 - PGA1_c15460 0.18 +0.7 1,609,536 - PGA1_c15460 0.18 +1.3 1,609,541 - PGA1_c15460 0.19 -1.0 1,609,541 - PGA1_c15460 0.19 +0.2 1,609,541 - PGA1_c15460 0.19 +0.6 1,609,541 - PGA1_c15460 0.19 +0.9 1,609,541 - PGA1_c15460 0.19 +0.1 1,609,689 + PGA1_c15460 0.36 -1.5 1,609,693 + PGA1_c15460 0.37 +0.7 1,609,700 - PGA1_c15460 0.38 -0.6 1,609,701 - PGA1_c15460 0.38 +0.2 1,609,708 + PGA1_c15460 0.39 +0.5 1,609,708 + PGA1_c15460 0.39 -1.8 1,609,716 - PGA1_c15460 0.40 +1.6 1,609,804 - PGA1_c15460 0.50 -1.4 1,609,889 + PGA1_c15460 0.60 -0.4 1,609,897 - PGA1_c15460 0.61 -0.4
Or see this region's nucleotide sequence