Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2797 and Dshi_2798 overlap by 4 nucleotides Dshi_2798 and Dshi_2799 are separated by 120 nucleotides
Dshi_2797: Dshi_2797 - Fructokinase (EC 2.7.1.4) (from data) , at 2,955,983 to 2,956,909
_2797
Dshi_2798: Dshi_2798 - D-tyrosyl-tRNA(Tyr) deacylase (RefSeq), at 2,956,906 to 2,957,343
_2798
Dshi_2799: Dshi_2799 - Flavocytochrome c sulphide dehydrogenase flavin-binding (RefSeq), at 2,957,464 to 2,958,732
_2799
Position (kb)
2956
2957
2958 Strain fitness (log2 ratio)
-2
-1
0
1 at 2955.972 kb on - strand at 2956.091 kb on - strand, within Dshi_2797 at 2956.115 kb on + strand, within Dshi_2797 at 2956.187 kb on + strand, within Dshi_2797 at 2956.350 kb on - strand, within Dshi_2797 at 2956.555 kb on - strand, within Dshi_2797 at 2956.555 kb on - strand, within Dshi_2797 at 2956.573 kb on - strand, within Dshi_2797 at 2956.616 kb on + strand, within Dshi_2797 at 2956.725 kb on - strand, within Dshi_2797 at 2956.823 kb on + strand at 2956.834 kb on - strand at 2956.856 kb on + strand at 2956.976 kb on + strand, within Dshi_2798 at 2956.984 kb on - strand, within Dshi_2798 at 2957.304 kb on + strand at 2957.530 kb on - strand at 2957.613 kb on + strand, within Dshi_2799 at 2957.621 kb on - strand, within Dshi_2799 at 2957.640 kb on - strand, within Dshi_2799 at 2957.717 kb on + strand, within Dshi_2799 at 2958.028 kb on + strand, within Dshi_2799 at 2958.046 kb on - strand, within Dshi_2799 at 2958.046 kb on - strand, within Dshi_2799 at 2958.178 kb on - strand, within Dshi_2799 at 2958.215 kb on + strand, within Dshi_2799
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 2,955,972 - -0.9 2,956,091 - Dshi_2797 0.12 +0.2 2,956,115 + Dshi_2797 0.14 +1.6 2,956,187 + Dshi_2797 0.22 -0.2 2,956,350 - Dshi_2797 0.40 +0.5 2,956,555 - Dshi_2797 0.62 +0.1 2,956,555 - Dshi_2797 0.62 +0.3 2,956,573 - Dshi_2797 0.64 +0.0 2,956,616 + Dshi_2797 0.68 +1.1 2,956,725 - Dshi_2797 0.80 -0.3 2,956,823 + +0.3 2,956,834 - +0.3 2,956,856 + -0.5 2,956,976 + Dshi_2798 0.16 -1.3 2,956,984 - Dshi_2798 0.18 -0.4 2,957,304 + -0.3 2,957,530 - -0.7 2,957,613 + Dshi_2799 0.12 -0.2 2,957,621 - Dshi_2799 0.12 +0.4 2,957,640 - Dshi_2799 0.14 +0.2 2,957,717 + Dshi_2799 0.20 -0.3 2,958,028 + Dshi_2799 0.44 +0.3 2,958,046 - Dshi_2799 0.46 -1.8 2,958,046 - Dshi_2799 0.46 +1.0 2,958,178 - Dshi_2799 0.56 +0.5 2,958,215 + Dshi_2799 0.59 +0.4
Or see this region's nucleotide sequence